Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_F_C19
         (716 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_0071 - 11910629-11910883,11912716-11913081                       29   2.8  
12_02_1229 + 27197464-27197481,27200438-27201583,27201935-272022...    29   4.9  
11_06_0592 - 25327128-25329566                                         28   6.4  
12_01_0318 - 2425178-2425267,2425830-2426008,2426594-2426654,242...    28   8.5  
03_02_0557 + 9450212-9450346,9450553-9450633,9450768-9451114,945...    28   8.5  

>08_02_0071 - 11910629-11910883,11912716-11913081
          Length = 206

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 3/51 (5%)
 Frame = -1

Query: 659 PSRTYNSSASHLLVQCAAVNTCRSVMR---TPPQYCSNPYGVIDAIHGHSR 516
           PS   +SS S   +         +V+R   +P   CS  +G + A+HGH R
Sbjct: 69  PSPMPSSSGSEGTINDHGAGNAAAVLRLEASPCHLCSREFGNMKAVHGHKR 119


>12_02_1229 +
           27197464-27197481,27200438-27201583,27201935-27202201,
           27202849-27202882,27202997-27203100,27203174-27203308,
           27203367-27203511,27203864-27203880
          Length = 621

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = +1

Query: 559 EQYCGGVLITDRHVLTAAHCTRRW 630
           E +C G+L+ DRH++  A  TR+W
Sbjct: 56  EVHCNGLLLLDRHIVNPA--TRQW 77


>11_06_0592 - 25327128-25329566
          Length = 812

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 13/40 (32%), Positives = 21/40 (52%)
 Frame = -1

Query: 188 AWLVFSWMNRLVLPLPMCSPPFSITSRHAGSVNSRKIAIR 69
           A LV  W+   +LPL +  PP + T   AG +  +++  R
Sbjct: 280 ACLVRRWVAEGLLPLRVVEPPLTTTMEEAGELCFKELVFR 319


>12_01_0318 -
           2425178-2425267,2425830-2426008,2426594-2426654,
           2426851-2427160,2428514-2428777,2432595-2433865
          Length = 724

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 15/43 (34%), Positives = 25/43 (58%)
 Frame = -1

Query: 671 RSYSPSRTYNSSASHLLVQCAAVNTCRSVMRTPPQYCSNPYGV 543
           R++SP+ + ++SAS   V C A    + V+R  P YC + + V
Sbjct: 497 RAFSPAASSSASASTQCVVCLAEYEEKDVLRVLP-YCGHGFHV 538


>03_02_0557 +
           9450212-9450346,9450553-9450633,9450768-9451114,
           9451345-9451945,9452206-9452239,9452514-9452577,
           9452909-9453325,9453439-9453523,9453773-9453831,
           9453931-9454043,9456407-9456509,9456597-9456654,
           9456781-9456834,9456922-9457131,9457254-9457312,
           9457436-9457495,9457709-9457802,9458366-9458506,
           9458562-9458741
          Length = 964

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
 Frame = +2

Query: 548 HTDSNSIAVGSSSLIDTC*RPRIVQEGGTP--TNYTYDLVN 664
           + DSNS  +G   + D    P + +EGG P  T  TY L N
Sbjct: 546 NVDSNSKDLGQPKVRDNTLHPMLFKEGGLPDYTLLTYKLKN 586


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,919,453
Number of Sequences: 37544
Number of extensions: 440445
Number of successful extensions: 1137
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1113
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1137
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1862792824
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)