Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P16_F_C19
(716 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like p... 44 1e-04
AF003384-12|AAB54236.2| 331|Caenorhabditis elegans Trypsin-like... 40 0.002
U97408-1|AAB93344.2| 360|Caenorhabditis elegans Trypsin-like pr... 38 0.009
U58751-11|AAB00662.1| 265|Caenorhabditis elegans Trypsin-like p... 38 0.009
Z78013-9|CAB01420.2| 297|Caenorhabditis elegans Hypothetical pr... 34 0.12
AF003134-1|AAB54144.1| 522|Caenorhabditis elegans Trypsin-like ... 32 0.47
Z92832-5|CAB07374.2| 292|Caenorhabditis elegans Hypothetical pr... 31 1.1
U70848-2|AAB09110.4| 313|Caenorhabditis elegans Trypsin-like pr... 31 1.1
Z92784-2|CAB07193.3| 2029|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z69664-9|CAA93519.2| 1470|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z68880-10|CAA93100.2| 1470|Caenorhabditis elegans Hypothetical p... 29 4.4
AF308449-1|AAL09435.1| 1347|Caenorhabditis elegans PXF isoform C... 29 4.4
AF308447-1|AAL09433.1| 1470|Caenorhabditis elegans PXF isoform A... 29 4.4
AF170796-1|AAF22963.1| 1470|Caenorhabditis elegans RA-GEF protein. 29 4.4
Z83236-10|CAB05780.2| 236|Caenorhabditis elegans Hypothetical p... 28 5.8
Z66560-2|CAE17736.1| 127|Caenorhabditis elegans Hypothetical pr... 28 7.7
AF106577-10|AAC78189.1| 796|Caenorhabditis elegans Hypothetical... 28 7.7
>U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like
protease protein 1 protein.
Length = 293
Score = 43.6 bits (98), Expect = 1e-04
Identities = 18/44 (40%), Positives = 22/44 (50%)
Frame = +1
Query: 487 RITGSRPANPREWPWMASITPYGFEQYCGGVLITDRHVLTAAHC 618
R+ G ++P WPW + CGG LI VLTAAHC
Sbjct: 57 RLIGGSESSPHSWPWTVQLLSRLGHHRCGGSLIDPNFVLTAAHC 100
>AF003384-12|AAB54236.2| 331|Caenorhabditis elegans Trypsin-like
protease protein 5 protein.
Length = 331
Score = 39.5 bits (88), Expect = 0.002
Identities = 27/78 (34%), Positives = 37/78 (47%), Gaps = 8/78 (10%)
Frame = +1
Query: 418 DEILLKINRAENRGCGL-STRAQGRITGS--RPANPREW-PWMASITPYG----FEQYCG 573
+ + + N ++ CG ST +T + NP PW I FE CG
Sbjct: 4 ENVDINSNNLDDELCGRQSTYTSFMLTDAAGNTGNPTHLAPWAVQIRVKARKGDFEVICG 63
Query: 574 GVLITDRHVLTAAHCTRR 627
G LIT +HVLTAAHC ++
Sbjct: 64 GTLITLKHVLTAAHCFQK 81
>U97408-1|AAB93344.2| 360|Caenorhabditis elegans Trypsin-like
protease protein 6 protein.
Length = 360
Score = 37.5 bits (83), Expect = 0.009
Identities = 22/76 (28%), Positives = 32/76 (42%), Gaps = 8/76 (10%)
Frame = +1
Query: 439 NRAENRGCGLSTRAQGRITGSRPANPREWPWMASITPYG--------FEQYCGGVLITDR 594
N CG + ++ +I R A E PW I Y + ++C G L + R
Sbjct: 26 NEKRLEDCGKNVKS--KIFNGRKAEIDEAPWAVRINTYTNVKNIDETWSKHCSGTLTSPR 83
Query: 595 HVLTAAHCTRRWDADE 642
H+LTA HC + E
Sbjct: 84 HILTATHCAATYTETE 99
>U58751-11|AAB00662.1| 265|Caenorhabditis elegans Trypsin-like
protease protein 2 protein.
Length = 265
Score = 37.5 bits (83), Expect = 0.009
Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Frame = +1
Query: 487 RITGSRPANPREWPWMASITPYGFE-QYCGGVLITDRHVLTAAHCTRRWDADELY-VRLG 660
R+ G P +PW A++ + +CG ++ H++TAAHC + Y V +G
Sbjct: 26 RVVGGFETVPGAFPWTAALRNKATKAHHCGASILDKTHLITAAHCFEEDERVSSYEVVVG 85
Query: 661 EYDLXRTN 684
++D +T+
Sbjct: 86 DWDNNQTD 93
>Z78013-9|CAB01420.2| 297|Caenorhabditis elegans Hypothetical
protein F15B9.5 protein.
Length = 297
Score = 33.9 bits (74), Expect = 0.12
Identities = 20/49 (40%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = +1
Query: 547 PYGFEQYCGGVLITDRHVLTAAHCTRRWD--ADELYVRLGEYDLXRTND 687
P G CGGVLI V+T+AHC D A V LG+ L + +D
Sbjct: 39 PDGTTNVCGGVLIAPSIVITSAHCVFSGDDFAVTAKVTLGDVHLNKHDD 87
>AF003134-1|AAB54144.1| 522|Caenorhabditis elegans Trypsin-like
protease protein 7 protein.
Length = 522
Score = 31.9 bits (69), Expect = 0.47
Identities = 14/48 (29%), Positives = 23/48 (47%), Gaps = 4/48 (8%)
Frame = +1
Query: 487 RITGSRPANPREWPWMASITPYGFEQY----CGGVLITDRHVLTAAHC 618
++ R A+ E PW Y ++ C G +++ RH+L A HC
Sbjct: 162 KVYNGRDASQSEAPWSVFTYLYSKDEQSATTCTGTIVSPRHILIATHC 209
>Z92832-5|CAB07374.2| 292|Caenorhabditis elegans Hypothetical
protein F31D4.6 protein.
Length = 292
Score = 30.7 bits (66), Expect = 1.1
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +1
Query: 517 REWPWMASITPYGFEQYCGGVLITDRHVLTAAH 615
+ +PW S T G + GG +I+ H++TAAH
Sbjct: 26 KNFPWAVSFTVDGVNRL-GGSIISPYHIITAAH 57
>U70848-2|AAB09110.4| 313|Caenorhabditis elegans Trypsin-like
protease protein 3 protein.
Length = 313
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 4/46 (8%)
Frame = +1
Query: 529 WMASITPYGFEQY---CGGVLITDRHVLTAAHCTRRWDADE-LYVR 654
WMA + YG CG +I D ++TAAHC + +YVR
Sbjct: 50 WMAKLVSYGDNGQGILCGATVIDDFWLVTAAHCALQLQTRSFVYVR 95
>Z92784-2|CAB07193.3| 2029|Caenorhabditis elegans Hypothetical protein
F31C3.3 protein.
Length = 2029
Score = 28.7 bits (61), Expect = 4.4
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +1
Query: 529 WMASITPYGFEQYCGGVLITDRHVLTAAH 615
WM+ +PYGF+ + G+ +T T +H
Sbjct: 1174 WMSHSSPYGFQVFSDGLQLTSSFRQTVSH 1202
>Z69664-9|CAA93519.2| 1470|Caenorhabditis elegans Hypothetical protein
T14G10.2a protein.
Length = 1470
Score = 28.7 bits (61), Expect = 4.4
Identities = 20/55 (36%), Positives = 26/55 (47%)
Frame = -1
Query: 677 RCRSYSPSRTYNSSASHLLVQCAAVNTCRSVMRTPPQYCSNPYGVIDAIHGHSRG 513
RCRS SP+ + SS S + AA S+ P + SNPY + GH G
Sbjct: 1361 RCRSRSPASSGCSSFS-TIASIAAT----SMAAAPSAFVSNPYQHHQTVRGHVIG 1410
>Z68880-10|CAA93100.2| 1470|Caenorhabditis elegans Hypothetical
protein T14G10.2a protein.
Length = 1470
Score = 28.7 bits (61), Expect = 4.4
Identities = 20/55 (36%), Positives = 26/55 (47%)
Frame = -1
Query: 677 RCRSYSPSRTYNSSASHLLVQCAAVNTCRSVMRTPPQYCSNPYGVIDAIHGHSRG 513
RCRS SP+ + SS S + AA S+ P + SNPY + GH G
Sbjct: 1361 RCRSRSPASSGCSSFS-TIASIAAT----SMAAAPSAFVSNPYQHHQTVRGHVIG 1410
>AF308449-1|AAL09435.1| 1347|Caenorhabditis elegans PXF isoform C
protein.
Length = 1347
Score = 28.7 bits (61), Expect = 4.4
Identities = 20/55 (36%), Positives = 26/55 (47%)
Frame = -1
Query: 677 RCRSYSPSRTYNSSASHLLVQCAAVNTCRSVMRTPPQYCSNPYGVIDAIHGHSRG 513
RCRS SP+ + SS S + AA S+ P + SNPY + GH G
Sbjct: 1238 RCRSRSPASSGCSSFS-TIASIAAT----SMAAAPSAFVSNPYQHHQTVRGHVIG 1287
>AF308447-1|AAL09433.1| 1470|Caenorhabditis elegans PXF isoform A
protein.
Length = 1470
Score = 28.7 bits (61), Expect = 4.4
Identities = 20/55 (36%), Positives = 26/55 (47%)
Frame = -1
Query: 677 RCRSYSPSRTYNSSASHLLVQCAAVNTCRSVMRTPPQYCSNPYGVIDAIHGHSRG 513
RCRS SP+ + SS S + AA S+ P + SNPY + GH G
Sbjct: 1361 RCRSRSPASSGCSSFS-TIASIAAT----SMAAAPSAFVSNPYQHHQTVRGHVIG 1410
>AF170796-1|AAF22963.1| 1470|Caenorhabditis elegans RA-GEF protein.
Length = 1470
Score = 28.7 bits (61), Expect = 4.4
Identities = 20/55 (36%), Positives = 26/55 (47%)
Frame = -1
Query: 677 RCRSYSPSRTYNSSASHLLVQCAAVNTCRSVMRTPPQYCSNPYGVIDAIHGHSRG 513
RCRS SP+ + SS S + AA S+ P + SNPY + GH G
Sbjct: 1361 RCRSRSPASSGCSSFS-TIASIAAT----SMAAAPSAFVSNPYQHHQTVRGHVIG 1410
>Z83236-10|CAB05780.2| 236|Caenorhabditis elegans Hypothetical
protein K10H10.4 protein.
Length = 236
Score = 28.3 bits (60), Expect = 5.8
Identities = 14/45 (31%), Positives = 18/45 (40%)
Frame = -1
Query: 647 YNSSASHLLVQCAAVNTCRSVMRTPPQYCSNPYGVIDAIHGHSRG 513
Y + L QC + C M+ PQY +P G G S G
Sbjct: 26 YACNQPQLYSQCNCPSFCSGYMQQQPQYYQSPCGYSSGCSGGSGG 70
>Z66560-2|CAE17736.1| 127|Caenorhabditis elegans Hypothetical
protein D1053.4 protein.
Length = 127
Score = 27.9 bits (59), Expect = 7.7
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +3
Query: 33 CYXLLLTVAFVKADGDFSRVDGPGMARCDRK 125
C+ LL TV+F+ A+ SR GM RC+++
Sbjct: 7 CFLLLTTVSFL-ANAQSSRQRNNGMVRCNKE 36
>AF106577-10|AAC78189.1| 796|Caenorhabditis elegans Hypothetical
protein F46F5.11 protein.
Length = 796
Score = 27.9 bits (59), Expect = 7.7
Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
Frame = +1
Query: 253 HCIQEDFKKDYLVFMDYVCVIERSSIGVCCPEN--EVKEGIEALAGDLPATAPKNENDEI 426
H +DFK + V+ D +I+ C PEN +++ I+ L DL E D +
Sbjct: 321 HNYLKDFKDEKQVYEDSGRMIDYLHNWKCSPENSKQIENCIKQLVNDLVKVKLWGEQDAV 380
Query: 427 LLKINRAE 450
L ++ A+
Sbjct: 381 LTELFLAD 388
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,296,293
Number of Sequences: 27780
Number of extensions: 348125
Number of successful extensions: 866
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 839
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 866
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1676746902
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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