Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_F_C19
         (716 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    47   2e-07
AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.              23   2.9  
AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta...    23   2.9  
DQ026036-1|AAY87895.1|  529|Apis mellifera nicotinic acetylcholi...    22   5.0  
DQ026035-1|AAY87894.1|  529|Apis mellifera nicotinic acetylcholi...    22   5.0  
DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein p...    22   6.7  
DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor p...    21   8.8  
DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor p...    21   8.8  

>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 46.8 bits (106), Expect = 2e-07
 Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
 Frame = +1

Query: 448 ENRGCGLSTRAQGRITGSRPANPREWPWMASIT-PYGFEQYCGGVLITDRHVLTAAHCTR 624
           ++  C    +   RI G       E+P MA I   Y     CG  +I+ R+VLTAAHC  
Sbjct: 147 DSTNCNCGWKNPSRIVGGTNTGINEFPMMAGIKRTYEPGMICGATIISKRYVLTAAHCII 206

Query: 625 RWDADELYVRLGEYD 669
             +  +L + +GE+D
Sbjct: 207 DENTTKLAIVVGEHD 221


>AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.
          Length = 145

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
 Frame = +1

Query: 511 NPREWPWMASITPYGFEQY-CGGVLITDRHVLTAAHCTRRWDAD 639
           N +  P +AS T +  E Y C    + +RH+ T  HC   +DAD
Sbjct: 74  NSQVQPSVASTTGFSKECYCCRESYLKERHI-TLHHC---YDAD 113


>AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta
           protein precursor protein.
          Length = 145

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
 Frame = +1

Query: 511 NPREWPWMASITPYGFEQY-CGGVLITDRHVLTAAHCTRRWDAD 639
           N +  P +AS T +  E Y C    + +RH+ T  HC   +DAD
Sbjct: 74  NSQVQPSVASTTGFSKECYCCRESYLKERHI-TLHHC---YDAD 113


>DQ026036-1|AAY87895.1|  529|Apis mellifera nicotinic acetylcholine
           receptor alpha6subunit protein.
          Length = 529

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 8/27 (29%), Positives = 15/27 (55%)
 Frame = -3

Query: 372 LYAFFNFILRAANTDRTPFDNTYVIHK 292
           L+  F+F+        T F +TY+I++
Sbjct: 22  LFVLFSFLRTRTKLQPTYFHHTYIIYE 48


>DQ026035-1|AAY87894.1|  529|Apis mellifera nicotinic acetylcholine
           receptor alpha6subunit protein.
          Length = 529

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 8/27 (29%), Positives = 15/27 (55%)
 Frame = -3

Query: 372 LYAFFNFILRAANTDRTPFDNTYVIHK 292
           L+  F+F+        T F +TY+I++
Sbjct: 22  LFVLFSFLRTRTKLQPTYFHHTYIIYE 48


>DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein
           protein.
          Length = 430

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 16/45 (35%), Positives = 19/45 (42%), Gaps = 2/45 (4%)
 Frame = +1

Query: 331 GVCCPENEVKEGIEALAGDLPATAPKNEN--DEILLKINRAENRG 459
           G   PEN +  GIE     L  T P+  N     L  I+   NRG
Sbjct: 60  GEYIPENALPVGIEIWRNKLFVTVPRWRNGIPATLTYISLDTNRG 104


>DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor
           protein.
          Length = 157

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = -2

Query: 118 SHLAMPGPSTLEKSP 74
           SHL +P P    KSP
Sbjct: 44  SHLCLPAPRINSKSP 58


>DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor
           protein.
          Length = 128

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = -2

Query: 118 SHLAMPGPSTLEKSP 74
           SHL +P P    KSP
Sbjct: 44  SHLCLPAPRINSKSP 58


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 200,992
Number of Sequences: 438
Number of extensions: 4377
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22170330
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)