Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_F_C18
         (794 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC002863-1|AAH02863.1|  441|Homo sapiens chromosome 9 open readi...    57   8e-08
AL499604-5|CAI12807.1|  172|Homo sapiens chromosome 9 open readi...    57   8e-08
AL499604-4|CAI12806.1|  159|Homo sapiens chromosome 9 open readi...    57   8e-08
AL499604-3|CAI12805.1|  441|Homo sapiens chromosome 9 open readi...    57   8e-08
AK000213-1|BAA91013.1|  441|Homo sapiens protein ( Homo sapiens ...    57   8e-08
BC064356-1|AAH64356.1|  402|Homo sapiens zinc finger protein 558...    33   1.6  
AK055494-1|BAB70934.1|  402|Homo sapiens protein ( Homo sapiens ...    33   1.6  

>BC002863-1|AAH02863.1|  441|Homo sapiens chromosome 9 open reading
           frame 156 protein.
          Length = 441

 Score = 56.8 bits (131), Expect = 8e-08
 Identities = 23/50 (46%), Positives = 33/50 (66%)
 Frame = +3

Query: 645 QPIGSIETSFQNKRGVPRQPSVMKNARGTVVIDTSVFNNPEHALSGLXEF 794
           +P+G +E+ F  K G PRQPS+   +R  + I   +FNNPEH+L GL +F
Sbjct: 31  EPVGYLESCFSAKNGTPRQPSICSYSRACLRIRKRIFNNPEHSLMGLEQF 80


>AL499604-5|CAI12807.1|  172|Homo sapiens chromosome 9 open reading
           frame 156 protein.
          Length = 172

 Score = 56.8 bits (131), Expect = 8e-08
 Identities = 23/50 (46%), Positives = 33/50 (66%)
 Frame = +3

Query: 645 QPIGSIETSFQNKRGVPRQPSVMKNARGTVVIDTSVFNNPEHALSGLXEF 794
           +P+G +E+ F  K G PRQPS+   +R  + I   +FNNPEH+L GL +F
Sbjct: 29  EPVGYLESCFSAKNGTPRQPSICSYSRACLRIRKRIFNNPEHSLMGLEQF 78


>AL499604-4|CAI12806.1|  159|Homo sapiens chromosome 9 open reading
           frame 156 protein.
          Length = 159

 Score = 56.8 bits (131), Expect = 8e-08
 Identities = 23/50 (46%), Positives = 33/50 (66%)
 Frame = +3

Query: 645 QPIGSIETSFQNKRGVPRQPSVMKNARGTVVIDTSVFNNPEHALSGLXEF 794
           +P+G +E+ F  K G PRQPS+   +R  + I   +FNNPEH+L GL +F
Sbjct: 30  EPVGYLESCFSAKNGTPRQPSICSYSRACLRIRKRIFNNPEHSLMGLEQF 79


>AL499604-3|CAI12805.1|  441|Homo sapiens chromosome 9 open reading
           frame 156 protein.
          Length = 441

 Score = 56.8 bits (131), Expect = 8e-08
 Identities = 23/50 (46%), Positives = 33/50 (66%)
 Frame = +3

Query: 645 QPIGSIETSFQNKRGVPRQPSVMKNARGTVVIDTSVFNNPEHALSGLXEF 794
           +P+G +E+ F  K G PRQPS+   +R  + I   +FNNPEH+L GL +F
Sbjct: 31  EPVGYLESCFSAKNGTPRQPSICSYSRACLRIRKRIFNNPEHSLMGLEQF 80


>AK000213-1|BAA91013.1|  441|Homo sapiens protein ( Homo sapiens
           cDNA FLJ20206 fis, clone COLF1582. ).
          Length = 441

 Score = 56.8 bits (131), Expect = 8e-08
 Identities = 23/50 (46%), Positives = 33/50 (66%)
 Frame = +3

Query: 645 QPIGSIETSFQNKRGVPRQPSVMKNARGTVVIDTSVFNNPEHALSGLXEF 794
           +P+G +E+ F  K G PRQPS+   +R  + I   +FNNPEH+L GL +F
Sbjct: 31  EPVGYLESCFSAKNGTPRQPSICSYSRACLRIRKRIFNNPEHSLMGLEQF 80


>BC064356-1|AAH64356.1|  402|Homo sapiens zinc finger protein 558
           protein.
          Length = 402

 Score = 32.7 bits (71), Expect = 1.6
 Identities = 15/31 (48%), Positives = 18/31 (58%)
 Frame = +2

Query: 347 KLIKAALNSLRCSDCAEAGNNVSALKKQLST 439
           K I        CSDC +A NN+SA+KK L T
Sbjct: 339 KRIHTGEKPYECSDCGKAFNNLSAVKKHLRT 369


>AK055494-1|BAB70934.1|  402|Homo sapiens protein ( Homo sapiens
           cDNA FLJ30932 fis, clone FEBRA2006942, moderately
           similar to ZINC FINGER PROTEIN 33A. ).
          Length = 402

 Score = 32.7 bits (71), Expect = 1.6
 Identities = 15/31 (48%), Positives = 18/31 (58%)
 Frame = +2

Query: 347 KLIKAALNSLRCSDCAEAGNNVSALKKQLST 439
           K I        CSDC +A NN+SA+KK L T
Sbjct: 339 KRIHTGEKPYECSDCGKAFNNLSAVKKHLRT 369


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,737,673
Number of Sequences: 237096
Number of extensions: 1721026
Number of successful extensions: 2591
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2522
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2591
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9757565650
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)