Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_F_C17
         (789 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY094773-1|AAM11126.1|  307|Drosophila melanogaster GM14501p pro...   314   9e-86
AE014296-947|AAF50785.1|  307|Drosophila melanogaster CG4769-PA ...   314   9e-86
AY089328-1|AAL90066.1|  344|Drosophila melanogaster AT13706p pro...   249   4e-66
AE014297-4352|AAF56876.1|  344|Drosophila melanogaster CG14508-P...   249   4e-66
AY052149-1|AAK93573.1|  178|Drosophila melanogaster SD10877p pro...    29   7.2  
AE014134-1430|AAF52620.1|  178|Drosophila melanogaster CG8372-PA...    29   7.2  
AE014134-1429|AAN11157.1|  196|Drosophila melanogaster CG8372-PB...    29   7.2  

>AY094773-1|AAM11126.1|  307|Drosophila melanogaster GM14501p
           protein.
          Length = 307

 Score =  314 bits (771), Expect = 9e-86
 Identities = 153/259 (59%), Positives = 174/259 (67%)
 Frame = +1

Query: 13  MAATVGRICGARLLKKYGLVWPQACQLSTNTQGWTKNRKVWLSTLXXXXXXXXALLFALE 192
           MAAT+ R  G RLLK    +  Q  +  ++   W    K  +  L        AL++ALE
Sbjct: 1   MAATLRRFHGLRLLKSAPALSLQQAKNLSSAGSWASGNKKLIGALGAITGGVGALIYALE 60

Query: 193 QSVQASGSEAHPPHNPWNHSGWFSSLDHASVRRGYEVYKQVCKACHSLQYIAFRNLVNVT 372
           QSVQASG E H P   WNH G F +LDH SVRRGYEVYKQVC ACHS+QYIA+RNLV VT
Sbjct: 61  QSVQASGGEVHSPAQLWNHKGLFDALDHQSVRRGYEVYKQVCSACHSMQYIAYRNLVGVT 120

Query: 373 HTEDEAKAEAAEVMIKDGPDEEGNYFERPGKLSDYLPSXXXXXXXXXXXXXXXXXXDLSL 552
           HTE EAKAEA ++ +KDGPD+ GNY+ RPGKLSDY PS                  DLS 
Sbjct: 121 HTEAEAKAEAEQITVKDGPDDTGNYYTRPGKLSDYFPSPYPNEEAARAANNGAYPPDLSY 180

Query: 553 ICSGRKGGEDYIFALLTGYMEPPAGVXLREGQNYNPYFPXGAISMAQVLFDEXXXYSDGT 732
           I S RKGGEDYIF+LLTGY + PAGV LREGQ +NPYFP GAISMAQVL++E   Y DGT
Sbjct: 181 IVSARKGGEDYIFSLLTGYHDAPAGVVLREGQYFNPYFPGGAISMAQVLYNEVIEYEDGT 240

Query: 733 PATASXLAKDVATFLKWCS 789
           P T S LAKDVATFLKW S
Sbjct: 241 PPTQSQLAKDVATFLKWTS 259


>AE014296-947|AAF50785.1|  307|Drosophila melanogaster CG4769-PA
           protein.
          Length = 307

 Score =  314 bits (771), Expect = 9e-86
 Identities = 153/259 (59%), Positives = 174/259 (67%)
 Frame = +1

Query: 13  MAATVGRICGARLLKKYGLVWPQACQLSTNTQGWTKNRKVWLSTLXXXXXXXXALLFALE 192
           MAAT+ R  G RLLK    +  Q  +  ++   W    K  +  L        AL++ALE
Sbjct: 1   MAATLRRFHGLRLLKSAPALSLQQAKNLSSAGSWASGNKKLIGALGAITGGVGALIYALE 60

Query: 193 QSVQASGSEAHPPHNPWNHSGWFSSLDHASVRRGYEVYKQVCKACHSLQYIAFRNLVNVT 372
           QSVQASG E H P   WNH G F +LDH SVRRGYEVYKQVC ACHS+QYIA+RNLV VT
Sbjct: 61  QSVQASGGEVHSPAQLWNHKGLFDALDHQSVRRGYEVYKQVCSACHSMQYIAYRNLVGVT 120

Query: 373 HTEDEAKAEAAEVMIKDGPDEEGNYFERPGKLSDYLPSXXXXXXXXXXXXXXXXXXDLSL 552
           HTE EAKAEA ++ +KDGPD+ GNY+ RPGKLSDY PS                  DLS 
Sbjct: 121 HTEAEAKAEAEQITVKDGPDDTGNYYTRPGKLSDYFPSPYPNEEAARAANNGAYPPDLSY 180

Query: 553 ICSGRKGGEDYIFALLTGYMEPPAGVXLREGQNYNPYFPXGAISMAQVLFDEXXXYSDGT 732
           I S RKGGEDYIF+LLTGY + PAGV LREGQ +NPYFP GAISMAQVL++E   Y DGT
Sbjct: 181 IVSARKGGEDYIFSLLTGYHDAPAGVVLREGQYFNPYFPGGAISMAQVLYNEVIEYEDGT 240

Query: 733 PATASXLAKDVATFLKWCS 789
           P T S LAKDVATFLKW S
Sbjct: 241 PPTQSQLAKDVATFLKWTS 259


>AY089328-1|AAL90066.1|  344|Drosophila melanogaster AT13706p
           protein.
          Length = 344

 Score =  249 bits (609), Expect = 4e-66
 Identities = 121/228 (53%), Positives = 149/228 (65%), Gaps = 1/228 (0%)
 Frame = +1

Query: 109 GWTKNRKVWLSTLXXXXXXXXALLFALEQSVQASGSEAHPPHNPWNHSGWFSSLDHASVR 288
           G+T NRK+ L  L         L++ALE SV AS    HP H  WNH G  S+LD  SVR
Sbjct: 37  GFTGNRKL-LGALGALTGTAGLLIYALETSVDASSDCVHPAHQHWNHKGLLSALDKESVR 95

Query: 289 RGYEVYKQVCKACHSLQYIAFRNLVNVTHTEDEAKAEAAEVMIKDGPDEEGNYFERPGKL 468
           RGY VYK+VC +CHSLQY+A+RNLV V  TE EAKAEA  + ++DGP+EEG Y+ERPGKL
Sbjct: 96  RGYTVYKEVCSSCHSLQYMAYRNLVGVCMTEAEAKAEAEAITVRDGPNEEGEYYERPGKL 155

Query: 469 SDYLPSXXXXXXXXXXXXXXXXXXDLSLICSGRKGGEDYIFALLTGYMEPPAGVXLREGQ 648
           SD+ PS                  DLS I S RKGGEDY+F+LLTGY +PPAG  LR+G 
Sbjct: 156 SDHFPSPYANEEAARSANNGSYPPDLSYIVSARKGGEDYVFSLLTGYCDPPAGFALRDGL 215

Query: 649 NYNPYFPXGAISMAQVLFDEXXXYSD-GTPATASXLAKDVATFLKWCS 789
            +NPYF  GAI+M +V+ +E   + D   PA+A+ +AKDV  FLKW S
Sbjct: 216 YFNPYFSGGAIAMGKVVDNEVVSFEDPNVPASAAQIAKDVCVFLKWTS 263


>AE014297-4352|AAF56876.1|  344|Drosophila melanogaster CG14508-PA
           protein.
          Length = 344

 Score =  249 bits (609), Expect = 4e-66
 Identities = 121/228 (53%), Positives = 149/228 (65%), Gaps = 1/228 (0%)
 Frame = +1

Query: 109 GWTKNRKVWLSTLXXXXXXXXALLFALEQSVQASGSEAHPPHNPWNHSGWFSSLDHASVR 288
           G+T NRK+ L  L         L++ALE SV AS    HP H  WNH G  S+LD  SVR
Sbjct: 37  GFTGNRKL-LGALGALTGTAGLLIYALETSVDASSDCVHPAHQHWNHKGLLSALDKESVR 95

Query: 289 RGYEVYKQVCKACHSLQYIAFRNLVNVTHTEDEAKAEAAEVMIKDGPDEEGNYFERPGKL 468
           RGY VYK+VC +CHSLQY+A+RNLV V  TE EAKAEA  + ++DGP+EEG Y+ERPGKL
Sbjct: 96  RGYTVYKEVCSSCHSLQYMAYRNLVGVCMTEAEAKAEAEAITVRDGPNEEGEYYERPGKL 155

Query: 469 SDYLPSXXXXXXXXXXXXXXXXXXDLSLICSGRKGGEDYIFALLTGYMEPPAGVXLREGQ 648
           SD+ PS                  DLS I S RKGGEDY+F+LLTGY +PPAG  LR+G 
Sbjct: 156 SDHFPSPYANEEAARSANNGSYPPDLSYIVSARKGGEDYVFSLLTGYCDPPAGFALRDGL 215

Query: 649 NYNPYFPXGAISMAQVLFDEXXXYSD-GTPATASXLAKDVATFLKWCS 789
            +NPYF  GAI+M +V+ +E   + D   PA+A+ +AKDV  FLKW S
Sbjct: 216 YFNPYFSGGAIAMGKVVDNEVVSFEDPNVPASAAQIAKDVCVFLKWTS 263


>AY052149-1|AAK93573.1|  178|Drosophila melanogaster SD10877p
           protein.
          Length = 178

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 12/37 (32%), Positives = 16/37 (43%)
 Frame = +1

Query: 223 HPPHNPWNHSGWFSSLDHASVRRGYEVYKQVCKACHS 333
           HP H       W  ++  ASV  G  ++   C  CHS
Sbjct: 83  HPKHMVGGSYAWDEAVSKASVLYGTRIHNIFCDNCHS 119


>AE014134-1430|AAF52620.1|  178|Drosophila melanogaster CG8372-PA,
           isoform A protein.
          Length = 178

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 12/37 (32%), Positives = 16/37 (43%)
 Frame = +1

Query: 223 HPPHNPWNHSGWFSSLDHASVRRGYEVYKQVCKACHS 333
           HP H       W  ++  ASV  G  ++   C  CHS
Sbjct: 83  HPKHMVGGSYAWDEAVSKASVLYGTRIHNIFCDNCHS 119


>AE014134-1429|AAN11157.1|  196|Drosophila melanogaster CG8372-PB,
           isoform B protein.
          Length = 196

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 12/37 (32%), Positives = 16/37 (43%)
 Frame = +1

Query: 223 HPPHNPWNHSGWFSSLDHASVRRGYEVYKQVCKACHS 333
           HP H       W  ++  ASV  G  ++   C  CHS
Sbjct: 101 HPKHMVGGSYAWDEAVSKASVLYGTRIHNIFCDNCHS 137


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.317    0.133    0.419 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,490,095
Number of Sequences: 53049
Number of extensions: 809327
Number of successful extensions: 2639
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2429
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2628
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3654740856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)