Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P16_F_C17
(789 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z75533-7|CAA99820.1| 285|Caenorhabditis elegans Hypothetical pr... 229 1e-60
Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical pr... 29 2.9
U46753-6|AAO21474.1| 740|Caenorhabditis elegans Hypothetical pr... 29 3.8
U46753-5|ABB88235.1| 803|Caenorhabditis elegans Hypothetical pr... 29 3.8
U46753-4|AAO21475.1| 764|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z74032-5|CAA98467.1| 219|Caenorhabditis elegans Hypothetical pr... 28 6.6
AM419898-1|CAL99238.1| 1121|Caenorhabditis elegans cation transp... 28 6.6
AM419897-1|CAL99237.1| 1045|Caenorhabditis elegans cation transp... 28 6.6
AL132876-35|CAN99760.1| 1045|Caenorhabditis elegans Hypothetical... 28 6.6
AL132876-34|CAD21662.2| 1121|Caenorhabditis elegans Hypothetical... 28 6.6
AF000265-4|AAK68198.1| 457|Caenorhabditis elegans Hypothetical ... 28 8.8
>Z75533-7|CAA99820.1| 285|Caenorhabditis elegans Hypothetical
protein C54G4.8 protein.
Length = 285
Score = 229 bits (561), Expect = 1e-60
Identities = 110/205 (53%), Positives = 138/205 (67%)
Frame = +1
Query: 175 LLFALEQSVQASGSEAHPPHNPWNHSGWFSSLDHASVRRGYEVYKQVCKACHSLQYIAFR 354
L++ALE SV ASG HP PW HSG FSS D ASVRRGYEVYKQVC ACHS++++ +R
Sbjct: 27 LVYALENSVSASGDNVHPYALPWAHSGPFSSFDIASVRRGYEVYKQVCAACHSMKFLHYR 86
Query: 355 NLVNVTHTEDEAKAEAAEVMIKDGPDEEGNYFERPGKLSDYLPSXXXXXXXXXXXXXXXX 534
+ V+ TE+EAKAEAA+ +I D D++G +RPG L+D LP+
Sbjct: 87 HFVDTIMTEEEAKAEAADALIND-VDDKGASIQRPGMLTDKLPNPYPNKKAAAAANNGAA 145
Query: 535 XXDLSLICSGRKGGEDYIFALLTGYMEPPAGVXLREGQNYNPYFPXGAISMAQVLFDEXX 714
DLSL+ R GG+DY+F+LLTGY+E PAGV + +G+ YNPYFP G ISM Q LFDE
Sbjct: 146 PPDLSLMALARHGGDDYVFSLLTGYLEAPAGVKVDDGKAYNPYFPGGIISMPQQLFDEGI 205
Query: 715 XYSDGTPATASXLAKDVATFLKWCS 789
Y DGTPAT S AKDV+ F+ W +
Sbjct: 206 EYKDGTPATMSQQAKDVSAFMHWAA 230
>Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical
protein F28D9.1 protein.
Length = 601
Score = 29.5 bits (63), Expect = 2.9
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = -2
Query: 191 SSAKSRAPTPPPTTPKVDS 135
SS++SR+P PPP P+ DS
Sbjct: 508 SSSRSRSPPPPPRRPRQDS 526
>U46753-6|AAO21474.1| 740|Caenorhabditis elegans Hypothetical
protein C34F11.3a protein.
Length = 740
Score = 29.1 bits (62), Expect = 3.8
Identities = 23/80 (28%), Positives = 32/80 (40%)
Frame = +1
Query: 190 EQSVQASGSEAHPPHNPWNHSGWFSSLDHASVRRGYEVYKQVCKACHSLQYIAFRNLVNV 369
E +VQ S + PP + W + + R ++C S+ F+N VNV
Sbjct: 170 ETTVQTSFNPPDPPKDHWGKNDPLPKYEKIYHLRRNRGVTEICNDDGSIDQ-QFKN-VNV 227
Query: 370 THTEDEAKAEAAEVMIKDGP 429
T E E MI DGP
Sbjct: 228 TKEEFLNDTEKLTAMIVDGP 247
>U46753-5|ABB88235.1| 803|Caenorhabditis elegans Hypothetical
protein C34F11.3c protein.
Length = 803
Score = 29.1 bits (62), Expect = 3.8
Identities = 23/80 (28%), Positives = 32/80 (40%)
Frame = +1
Query: 190 EQSVQASGSEAHPPHNPWNHSGWFSSLDHASVRRGYEVYKQVCKACHSLQYIAFRNLVNV 369
E +VQ S + PP + W + + R ++C S+ F+N VNV
Sbjct: 233 ETTVQTSFNPPDPPKDHWGKNDPLPKYEKIYHLRRNRGVTEICNDDGSIDQ-QFKN-VNV 290
Query: 370 THTEDEAKAEAAEVMIKDGP 429
T E E MI DGP
Sbjct: 291 TKEEFLNDTEKLTAMIVDGP 310
>U46753-4|AAO21475.1| 764|Caenorhabditis elegans Hypothetical
protein C34F11.3b protein.
Length = 764
Score = 29.1 bits (62), Expect = 3.8
Identities = 23/80 (28%), Positives = 32/80 (40%)
Frame = +1
Query: 190 EQSVQASGSEAHPPHNPWNHSGWFSSLDHASVRRGYEVYKQVCKACHSLQYIAFRNLVNV 369
E +VQ S + PP + W + + R ++C S+ F+N VNV
Sbjct: 194 ETTVQTSFNPPDPPKDHWGKNDPLPKYEKIYHLRRNRGVTEICNDDGSIDQ-QFKN-VNV 251
Query: 370 THTEDEAKAEAAEVMIKDGP 429
T E E MI DGP
Sbjct: 252 TKEEFLNDTEKLTAMIVDGP 271
>Z74032-5|CAA98467.1| 219|Caenorhabditis elegans Hypothetical
protein F35B12.6 protein.
Length = 219
Score = 28.3 bits (60), Expect = 6.6
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = -2
Query: 212 PDACTDCSSAKSRAPTPPPTTPKVDSH 132
PD +D S+ +S +P PP P+ D H
Sbjct: 84 PDTISDDSADQSGSPNSPPFVPQGDGH 110
>AM419898-1|CAL99238.1| 1121|Caenorhabditis elegans cation
transporting ATPase protein.
Length = 1121
Score = 28.3 bits (60), Expect = 6.6
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +1
Query: 607 YMEPPAGVXLREGQNYNPYFPXGAISMAQVLF 702
++ PP+G E QN++ + AISMA V+F
Sbjct: 306 HIPPPSGRLQTELQNFSTFISIVAISMATVVF 337
>AM419897-1|CAL99237.1| 1045|Caenorhabditis elegans cation
transporting ATPase protein.
Length = 1045
Score = 28.3 bits (60), Expect = 6.6
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +1
Query: 607 YMEPPAGVXLREGQNYNPYFPXGAISMAQVLF 702
++ PP+G E QN++ + AISMA V+F
Sbjct: 306 HIPPPSGRLQTELQNFSTFISIVAISMATVVF 337
>AL132876-35|CAN99760.1| 1045|Caenorhabditis elegans Hypothetical
protein Y105E8A.12b protein.
Length = 1045
Score = 28.3 bits (60), Expect = 6.6
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +1
Query: 607 YMEPPAGVXLREGQNYNPYFPXGAISMAQVLF 702
++ PP+G E QN++ + AISMA V+F
Sbjct: 306 HIPPPSGRLQTELQNFSTFISIVAISMATVVF 337
>AL132876-34|CAD21662.2| 1121|Caenorhabditis elegans Hypothetical
protein Y105E8A.12a protein.
Length = 1121
Score = 28.3 bits (60), Expect = 6.6
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +1
Query: 607 YMEPPAGVXLREGQNYNPYFPXGAISMAQVLF 702
++ PP+G E QN++ + AISMA V+F
Sbjct: 306 HIPPPSGRLQTELQNFSTFISIVAISMATVVF 337
>AF000265-4|AAK68198.1| 457|Caenorhabditis elegans Hypothetical
protein C18E3.6 protein.
Length = 457
Score = 27.9 bits (59), Expect = 8.8
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = -2
Query: 218 SEPDACTDCSSAKSRAPTPPPTTP 147
S+P A C+ APTPPP P
Sbjct: 204 SDPGATPMCNRKSGGAPTPPPPPP 227
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.317 0.133 0.419
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,713,253
Number of Sequences: 27780
Number of extensions: 390833
Number of successful extensions: 1186
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1140
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1183
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1914239236
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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