Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_F_C11
         (800 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    25   0.53 
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    23   3.7  
DQ855489-1|ABH88176.1|  122|Tribolium castaneum chemosensory pro...    22   6.5  
AJ973444-1|CAJ01491.1|  122|Tribolium castaneum hypothetical pro...    22   6.5  

>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 25.4 bits (53), Expect = 0.53
 Identities = 28/87 (32%), Positives = 40/87 (45%), Gaps = 6/87 (6%)
 Frame = +1

Query: 430 LAKMIGETVRTLHDTNIIHGDLTTSNILLIPKNDNDNWIQCCEFHLVMI-DFGLS---YV 597
           +A+ +   +  L  T ++H DL   N+L+            CE H V + DFGLS   Y 
Sbjct: 597 IARQVALGMEHLAKTRVVHRDLAARNVLV------------CENHTVKVSDFGLSRDVYQ 644

Query: 598 DS-SAEDKGVDLYVLERALIS-THNDY 672
           D+   ++ G  L V   AL S TH  Y
Sbjct: 645 DNVYCKNGGGKLPVRWMALESLTHQRY 671


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 19/66 (28%), Positives = 29/66 (43%)
 Frame = +1

Query: 388 TKTGSENETNSLNILAKMIGETVRTLHDTNIIHGDLTTSNILLIPKNDNDNWIQCCEFHL 567
           T     +E   L  + +++GET+ T    N + G      ILLI      N + C  F L
Sbjct: 604 TSPKMRHELQKLAQVYRILGETIETW---NKLFG----YQILLITFQSGLNVVSCINFPL 656

Query: 568 VMIDFG 585
            ++D G
Sbjct: 657 GVLDRG 662



 Score = 21.8 bits (44), Expect = 6.5
 Identities = 5/21 (23%), Positives = 14/21 (66%)
 Frame = -3

Query: 729 YIALTRTFVCIIHFIE*LWIV 667
           Y +L + + C++  ++ LW++
Sbjct: 40  YPSLAKCYACLLMVVKILWVI 60


>DQ855489-1|ABH88176.1|  122|Tribolium castaneum chemosensory
           protein 2 protein.
          Length = 122

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 13/42 (30%), Positives = 19/42 (45%)
 Frame = +1

Query: 427 ILAKMIGETVRTLHDTNIIHGDLTTSNILLIPKNDNDNWIQC 552
           ILA +I   V   +D      D    + +L  K   DN++QC
Sbjct: 5   ILAVLIATAVAATYDVYPTKYDNVDIDAILHNKRLFDNYLQC 46


>AJ973444-1|CAJ01491.1|  122|Tribolium castaneum hypothetical
           protein protein.
          Length = 122

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 13/42 (30%), Positives = 19/42 (45%)
 Frame = +1

Query: 427 ILAKMIGETVRTLHDTNIIHGDLTTSNILLIPKNDNDNWIQC 552
           ILA +I   V   +D      D    + +L  K   DN++QC
Sbjct: 5   ILAVLIATAVAATYDVYPTKYDNVDIDAILHNKRLFDNYLQC 46


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,412
Number of Sequences: 336
Number of extensions: 3572
Number of successful extensions: 13
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21791490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)