Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P16_F_C09
(661 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_58989| Best HMM Match : RVT_1 (HMM E-Value=0) 40 0.002
SB_33564| Best HMM Match : RVT_1 (HMM E-Value=0.1) 39 0.004
SB_43973| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.005
SB_14726| Best HMM Match : Ribosomal_L30 (HMM E-Value=6.6) 38 0.007
SB_51257| Best HMM Match : Pox_F16 (HMM E-Value=4.1) 37 0.013
SB_51961| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.017
SB_48112| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.017
SB_17278| Best HMM Match : RVT_1 (HMM E-Value=0.0082) 37 0.017
SB_11764| Best HMM Match : DSHCT (HMM E-Value=1.9e-27) 37 0.017
SB_10927| Best HMM Match : RVT_1 (HMM E-Value=6.6e-39) 37 0.017
SB_33578| Best HMM Match : Exo_endo_phos (HMM E-Value=0.00076) 36 0.022
SB_26110| Best HMM Match : HipA_C (HMM E-Value=5.5) 36 0.022
SB_25497| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.022
SB_14729| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.022
SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28) 36 0.022
SB_49429| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.039
SB_31373| Best HMM Match : Put_DNA-bind_N (HMM E-Value=8.4) 36 0.039
SB_25119| Best HMM Match : Ribosomal_S27 (HMM E-Value=9.4) 36 0.039
SB_18046| Best HMM Match : RVT_1 (HMM E-Value=0.34) 36 0.039
SB_4935| Best HMM Match : Pox_F16 (HMM E-Value=5.3) 35 0.051
SB_33076| Best HMM Match : Put_DNA-bind_N (HMM E-Value=8.4) 35 0.051
SB_30407| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.067
SB_43828| Best HMM Match : XPG_N (HMM E-Value=1.8) 34 0.089
SB_26135| Best HMM Match : RVT_1 (HMM E-Value=0.072) 34 0.089
SB_19117| Best HMM Match : XPG_N (HMM E-Value=1.8) 34 0.089
SB_6030| Best HMM Match : rve (HMM E-Value=8.7e-30) 34 0.089
SB_43541| Best HMM Match : RVT_1 (HMM E-Value=0) 34 0.089
SB_42891| Best HMM Match : DUF537 (HMM E-Value=1.2e-23) 34 0.089
SB_40765| Best HMM Match : DX (HMM E-Value=1.4) 34 0.089
SB_20120| Best HMM Match : RVT_1 (HMM E-Value=0) 34 0.089
SB_31120| Best HMM Match : Pox_F16 (HMM E-Value=5) 34 0.12
SB_54752| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.16
SB_20783| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.16
SB_38808| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.21
SB_16492| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.36
SB_37654| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.48
SB_30049| Best HMM Match : FBA_2 (HMM E-Value=7) 31 0.63
SB_24816| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.63
SB_19530| Best HMM Match : EMI (HMM E-Value=3.5) 31 0.63
SB_2897| Best HMM Match : RVT_1 (HMM E-Value=3e-33) 31 0.63
SB_40344| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.83
SB_7946| Best HMM Match : DUF434 (HMM E-Value=7.5) 31 1.1
SB_19427| Best HMM Match : RVT_1 (HMM E-Value=7.5e-32) 30 1.9
SB_22775| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_8123| Best HMM Match : Tfb2 (HMM E-Value=0.00019) 29 3.4
SB_47667| Best HMM Match : Ldl_recept_a (HMM E-Value=0) 29 4.4
SB_58576| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.9
SB_56220| Best HMM Match : RVT_1 (HMM E-Value=3.7e-16) 28 5.9
SB_48902| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.9
SB_40983| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.9
SB_40552| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.9
SB_38731| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.9
SB_38717| Best HMM Match : Cornifin (HMM E-Value=7.2) 28 5.9
SB_34180| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.9
SB_34116| Best HMM Match : RVT_1 (HMM E-Value=0) 28 5.9
SB_33284| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.9
SB_32643| Best HMM Match : Carla_C4 (HMM E-Value=9.9) 28 5.9
SB_30890| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.9
SB_29924| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.9
SB_28979| Best HMM Match : RVT_1 (HMM E-Value=1.6e-40) 28 5.9
SB_24244| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.9
SB_22251| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.9
SB_36764| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.9
SB_36762| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.9
SB_29800| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.9
SB_24298| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.9
SB_19305| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.9
SB_14496| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.9
>SB_58989| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 885
Score = 39.5 bits (88), Expect = 0.002
Identities = 21/57 (36%), Positives = 28/57 (49%)
Frame = +2
Query: 89 RHRSRVHPYYLEPLRSSTVRFQRSFLPRTIRLWNELPSTVFPERYDMSFFKRGLWRV 259
R R HP PL +S+ SF RTI WN LP+ +F E + FK + R+
Sbjct: 823 RKTRRSHPESFIPLSTSSASEHLSFFSRTIIQWNNLPALLFNEPCSLPIFKDKISRL 879
>SB_33564| Best HMM Match : RVT_1 (HMM E-Value=0.1)
Length = 2075
Score = 38.7 bits (86), Expect = 0.004
Identities = 22/56 (39%), Positives = 29/56 (51%)
Frame = +2
Query: 98 SRVHPYYLEPLRSSTVRFQRSFLPRTIRLWNELPSTVFPERYDMSFFKRGLWRVLS 265
SR H L+++ + F SF PRTIR WN LP+ V D+ FK L +S
Sbjct: 1627 SRRHSRTYHQLQANILAFNYSFFPRTIRTWNLLPAEVV-NAADLPSFKSALAPAIS 1681
>SB_43973| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3142
Score = 38.3 bits (85), Expect = 0.005
Identities = 21/51 (41%), Positives = 27/51 (52%)
Frame = +2
Query: 98 SRVHPYYLEPLRSSTVRFQRSFLPRTIRLWNELPSTVFPERYDMSFFKRGL 250
SR H L+++ + F SF PRTIR WN LP+ V D+ FK L
Sbjct: 1073 SRRHSRTYHQLQANILAFNYSFFPRTIRTWNLLPAEVV-NAADLPSFKSAL 1122
>SB_14726| Best HMM Match : Ribosomal_L30 (HMM E-Value=6.6)
Length = 231
Score = 37.9 bits (84), Expect = 0.007
Identities = 19/48 (39%), Positives = 25/48 (52%)
Frame = +2
Query: 107 HPYYLEPLRSSTVRFQRSFLPRTIRLWNELPSTVFPERYDMSFFKRGL 250
H + L + T ++ SFLPR +RLWN LP +V R F GL
Sbjct: 184 HSEFYTILNARTDIYKYSFLPRALRLWNNLPQSVIDMRGCPEAFHSGL 231
>SB_51257| Best HMM Match : Pox_F16 (HMM E-Value=4.1)
Length = 243
Score = 37.1 bits (82), Expect = 0.013
Identities = 22/56 (39%), Positives = 28/56 (50%)
Frame = +2
Query: 95 RSRVHPYYLEPLRSSTVRFQRSFLPRTIRLWNELPSTVFPERYDMSFFKRGLWRVL 262
RSR + ++S+ + SF PRTIR WN LPS V E + FK VL
Sbjct: 177 RSRTNSSKYNQIQSNVLSHSYSFFPRTIRTWNLLPSEVV-ESSSIDSFKSSALPVL 231
>SB_51961| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 193
Score = 36.7 bits (81), Expect = 0.017
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +2
Query: 98 SRVHPYYLEPLRSSTVRFQRSFLPRTIRLWNELPSTV 208
+R H + L+S+ + + SF PR IR+WN LPS V
Sbjct: 122 TRRHNHSFLQLQSNILSYNYSFFPRAIRIWNLLPSNV 158
>SB_48112| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 232
Score = 36.7 bits (81), Expect = 0.017
Identities = 20/52 (38%), Positives = 28/52 (53%)
Frame = +2
Query: 95 RSRVHPYYLEPLRSSTVRFQRSFLPRTIRLWNELPSTVFPERYDMSFFKRGL 250
R++ +Y P + T ++ SFLPR +RLWN LP +V R F GL
Sbjct: 182 RTQHSEFYTIP-NARTDIYKYSFLPRALRLWNNLPQSVIDMRGCPEAFHAGL 232
>SB_17278| Best HMM Match : RVT_1 (HMM E-Value=0.0082)
Length = 506
Score = 36.7 bits (81), Expect = 0.017
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +2
Query: 98 SRVHPYYLEPLRSSTVRFQRSFLPRTIRLWNELPSTV 208
+R H + L+S+ + + SF PR IR+WN LPS V
Sbjct: 441 TRRHNHSFLQLQSNILSYNYSFFPRAIRIWNLLPSNV 477
>SB_11764| Best HMM Match : DSHCT (HMM E-Value=1.9e-27)
Length = 1492
Score = 36.7 bits (81), Expect = 0.017
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +2
Query: 98 SRVHPYYLEPLRSSTVRFQRSFLPRTIRLWNELPSTV 208
+R H + L+S+ + + SF PR IR+WN LPS V
Sbjct: 1427 TRRHNHSFLQLQSNILSYNYSFFPRAIRIWNLLPSNV 1463
>SB_10927| Best HMM Match : RVT_1 (HMM E-Value=6.6e-39)
Length = 452
Score = 36.7 bits (81), Expect = 0.017
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +2
Query: 98 SRVHPYYLEPLRSSTVRFQRSFLPRTIRLWNELPSTV 208
+R H + L+S+ + + SF PR IR+WN LPS V
Sbjct: 387 TRRHNHSFLQLQSNILSYNYSFFPRAIRIWNLLPSNV 423
>SB_33578| Best HMM Match : Exo_endo_phos (HMM E-Value=0.00076)
Length = 888
Score = 36.3 bits (80), Expect = 0.022
Identities = 20/56 (35%), Positives = 26/56 (46%)
Frame = +2
Query: 56 IPASRFYHRTARHRSRVHPYYLEPLRSSTVRFQRSFLPRTIRLWNELPSTVFPERY 223
+P S R HP + + + T F+ SF+PR IRLWN L TV Y
Sbjct: 713 LPLSTLSKPLRRSERTSHPEHYDIPYARTNIFKYSFVPRAIRLWNSLEVTVVLAAY 768
>SB_26110| Best HMM Match : HipA_C (HMM E-Value=5.5)
Length = 210
Score = 36.3 bits (80), Expect = 0.022
Identities = 18/43 (41%), Positives = 26/43 (60%)
Frame = +2
Query: 80 RTARHRSRVHPYYLEPLRSSTVRFQRSFLPRTIRLWNELPSTV 208
R+ R R YY + L+++T+ F SF R IR+WN LP+ V
Sbjct: 140 RSTRSTRRKELYYNQ-LQANTLAFNYSFFARAIRIWNLLPNDV 181
>SB_25497| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 372
Score = 36.3 bits (80), Expect = 0.022
Identities = 18/43 (41%), Positives = 26/43 (60%)
Frame = +2
Query: 80 RTARHRSRVHPYYLEPLRSSTVRFQRSFLPRTIRLWNELPSTV 208
R+ R R YY + L+++T+ F SF R IR+WN LP+ V
Sbjct: 294 RSTRSTRRKELYYNQ-LQANTLAFNYSFFARAIRIWNLLPNDV 335
>SB_14729| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 315
Score = 36.3 bits (80), Expect = 0.022
Identities = 18/43 (41%), Positives = 26/43 (60%)
Frame = +2
Query: 80 RTARHRSRVHPYYLEPLRSSTVRFQRSFLPRTIRLWNELPSTV 208
R+ R R YY + L+++T+ F SF R IR+WN LP+ V
Sbjct: 245 RSTRSTRRKELYYNQ-LQANTLAFNYSFFARAIRIWNLLPNDV 286
>SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28)
Length = 570
Score = 36.3 bits (80), Expect = 0.022
Identities = 18/43 (41%), Positives = 26/43 (60%)
Frame = +2
Query: 80 RTARHRSRVHPYYLEPLRSSTVRFQRSFLPRTIRLWNELPSTV 208
R+ R R YY + L+++T+ F SF R IR+WN LP+ V
Sbjct: 500 RSTRSTRRKELYYNQ-LQANTLAFNYSFFARAIRIWNLLPNDV 541
>SB_49429| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 918
Score = 35.5 bits (78), Expect = 0.039
Identities = 21/55 (38%), Positives = 27/55 (49%)
Frame = +2
Query: 98 SRVHPYYLEPLRSSTVRFQRSFLPRTIRLWNELPSTVFPERYDMSFFKRGLWRVL 262
SR + ++S+ + SF PRTIR WN LPS V E + FK VL
Sbjct: 853 SRTNSSKYNQIQSNVLSHSYSFFPRTIRTWNLLPSEVI-ESSSIDSFKSSALPVL 906
>SB_31373| Best HMM Match : Put_DNA-bind_N (HMM E-Value=8.4)
Length = 198
Score = 35.5 bits (78), Expect = 0.039
Identities = 21/55 (38%), Positives = 27/55 (49%)
Frame = +2
Query: 98 SRVHPYYLEPLRSSTVRFQRSFLPRTIRLWNELPSTVFPERYDMSFFKRGLWRVL 262
SR + ++S+ + SF PRTIR WN LPS V E + FK VL
Sbjct: 133 SRTNSSKYNQIQSNVLSHSYSFFPRTIRTWNLLPSEVI-ESSSIDSFKSSALPVL 186
>SB_25119| Best HMM Match : Ribosomal_S27 (HMM E-Value=9.4)
Length = 443
Score = 35.5 bits (78), Expect = 0.039
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = +2
Query: 98 SRVHPYYLEPLRSSTVRFQRSFLPRTIRLWNELPSTV 208
+R H + L S+ + F SF PR IR WN LP +
Sbjct: 262 TRRHSLSFQQLHSNILSFNYSFFPRAIRAWNLLPDNI 298
>SB_18046| Best HMM Match : RVT_1 (HMM E-Value=0.34)
Length = 837
Score = 35.5 bits (78), Expect = 0.039
Identities = 21/55 (38%), Positives = 27/55 (49%)
Frame = +2
Query: 98 SRVHPYYLEPLRSSTVRFQRSFLPRTIRLWNELPSTVFPERYDMSFFKRGLWRVL 262
SR + ++S+ + SF PRTIR WN LPS V E + FK VL
Sbjct: 772 SRTNSSKYNQIQSNVLSHSYSFFPRTIRTWNLLPSEVI-ESSSIDSFKSSALPVL 825
>SB_4935| Best HMM Match : Pox_F16 (HMM E-Value=5.3)
Length = 243
Score = 35.1 bits (77), Expect = 0.051
Identities = 21/55 (38%), Positives = 27/55 (49%)
Frame = +2
Query: 98 SRVHPYYLEPLRSSTVRFQRSFLPRTIRLWNELPSTVFPERYDMSFFKRGLWRVL 262
SR + ++S+ + SF PRTIR WN LPS V E + FK VL
Sbjct: 178 SRTNSSKYNQIQSNVLSHSYSFFPRTIRTWNLLPSEVV-ESSSIDSFKSSALPVL 231
>SB_33076| Best HMM Match : Put_DNA-bind_N (HMM E-Value=8.4)
Length = 152
Score = 35.1 bits (77), Expect = 0.051
Identities = 21/55 (38%), Positives = 27/55 (49%)
Frame = +2
Query: 98 SRVHPYYLEPLRSSTVRFQRSFLPRTIRLWNELPSTVFPERYDMSFFKRGLWRVL 262
SR + ++S+ + SF PRTIR WN LPS V E + FK VL
Sbjct: 87 SRTNSSKYNQIQSNVLSHSYSFFPRTIRTWNLLPSEVV-ESSSIDSFKSSALPVL 140
>SB_30407| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 788
Score = 34.7 bits (76), Expect = 0.067
Identities = 19/48 (39%), Positives = 25/48 (52%)
Frame = +2
Query: 98 SRVHPYYLEPLRSSTVRFQRSFLPRTIRLWNELPSTVFPERYDMSFFK 241
SR + ++S+ + SF PRTIR WN LPS V E + FK
Sbjct: 544 SRTNSSKYNQIQSNVLSHSYSFFPRTIRTWNLLPSEVI-ESSSIDSFK 590
>SB_43828| Best HMM Match : XPG_N (HMM E-Value=1.8)
Length = 174
Score = 34.3 bits (75), Expect = 0.089
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Frame = +2
Query: 77 HRTARHR-SRVHPYYLEPLRSSTVRFQRSFLPRTIRLWNELPSTVFPERYDMSFFKRGL 250
H+ R R S YY E +++ ++ SF PRTIR WN LP+ + E + FKR L
Sbjct: 110 HQDLRTRNSHNFKYYQE--KATKNKYFYSFFPRTIRHWNTLPNELV-ELGSIEHFKRDL 165
>SB_26135| Best HMM Match : RVT_1 (HMM E-Value=0.072)
Length = 375
Score = 34.3 bits (75), Expect = 0.089
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Frame = +2
Query: 77 HRTARHR-SRVHPYYLEPLRSSTVRFQRSFLPRTIRLWNELPSTVFPERYDMSFFKRGL 250
H+ R R S YY E +++ ++ SF PRTIR WN LP+ + E + FKR L
Sbjct: 311 HQDLRTRNSHNFKYYQE--KATKNKYFYSFFPRTIRHWNTLPNELV-ELGSIEHFKRDL 366
>SB_19117| Best HMM Match : XPG_N (HMM E-Value=1.8)
Length = 361
Score = 34.3 bits (75), Expect = 0.089
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Frame = +2
Query: 77 HRTARHR-SRVHPYYLEPLRSSTVRFQRSFLPRTIRLWNELPSTVFPERYDMSFFKRGL 250
H+ R R S YY E +++ ++ SF PRTIR WN LP+ + E + FKR L
Sbjct: 297 HQDLRTRNSHNFKYYQE--KATKNKYFYSFFPRTIRHWNTLPNELV-ELGSIEHFKRDL 352
>SB_6030| Best HMM Match : rve (HMM E-Value=8.7e-30)
Length = 1280
Score = 34.3 bits (75), Expect = 0.089
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +2
Query: 116 YLEPLRSSTVRFQRSFLPRTIRLWNELPSTV 208
Y L+++T+ F SF R IR+WN LP+ V
Sbjct: 1221 YCNQLQANTLTFNYSFFARAIRIWNLLPNDV 1251
>SB_43541| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 581
Score = 34.3 bits (75), Expect = 0.089
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Frame = +2
Query: 77 HRTARHR-SRVHPYYLEPLRSSTVRFQRSFLPRTIRLWNELPSTVFPERYDMSFFKRGL 250
H+ R R S YY E +++ ++ SF PRTIR WN LP+ + E + FKR L
Sbjct: 517 HQDLRTRNSHNFKYYQE--KATKNKYFYSFFPRTIRHWNTLPNELV-ELGSIEHFKRDL 572
>SB_42891| Best HMM Match : DUF537 (HMM E-Value=1.2e-23)
Length = 2386
Score = 34.3 bits (75), Expect = 0.089
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = +2
Query: 98 SRVHPYYLEPLRSSTVRFQRSFLPRTIRLWNELPSTV 208
SR + ++S+ + SF PRTIR WN LPS V
Sbjct: 440 SRTNSSKYNQIQSNVLSHSYSFFPRTIRTWNLLPSEV 476
>SB_40765| Best HMM Match : DX (HMM E-Value=1.4)
Length = 278
Score = 34.3 bits (75), Expect = 0.089
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Frame = +2
Query: 77 HRTARHR-SRVHPYYLEPLRSSTVRFQRSFLPRTIRLWNELPSTVFPERYDMSFFKRGL 250
H+ R R S YY E +++ ++ SF PRTIR WN LP+ + E + FKR L
Sbjct: 214 HQDLRTRNSHNFKYYQE--KATKNKYFYSFFPRTIRHWNTLPNELV-ELDSIEHFKRDL 269
>SB_20120| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 666
Score = 34.3 bits (75), Expect = 0.089
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Frame = +2
Query: 77 HRTARHR-SRVHPYYLEPLRSSTVRFQRSFLPRTIRLWNELPSTVFPERYDMSFFKRGL 250
H+ R R S YY E +++ ++ SF PRTIR WN LP+ + E + FKR L
Sbjct: 602 HQDLRTRNSHNFKYYQE--KATKNKYFYSFFPRTIRHWNTLPNELV-ELGSIEHFKRDL 657
>SB_31120| Best HMM Match : Pox_F16 (HMM E-Value=5)
Length = 284
Score = 33.9 bits (74), Expect = 0.12
Identities = 20/55 (36%), Positives = 27/55 (49%)
Frame = +2
Query: 98 SRVHPYYLEPLRSSTVRFQRSFLPRTIRLWNELPSTVFPERYDMSFFKRGLWRVL 262
SR + ++S+ + SF PRTIR WN LP+ V E + FK VL
Sbjct: 219 SRTNSSKYNQIQSNVLSHSYSFFPRTIRTWNLLPAQVV-ESSSIDSFKSSALPVL 272
>SB_54752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 792
Score = 33.5 bits (73), Expect = 0.16
Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = +2
Query: 62 ASRFYHRTARHRSR-VHPYYLEPLRSSTVRFQR-SFLPRTIRLWNELPS 202
AS T+R+ +R HP + + R S+ PRT++LWN LPS
Sbjct: 715 ASLLSPATSRYNTRSYHPNNYRLFSTHNQNYYRNSYFPRTVKLWNSLPS 763
>SB_20783| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 295
Score = 33.5 bits (73), Expect = 0.16
Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = +2
Query: 62 ASRFYHRTARHRSR-VHPYYLEPLRSSTVRFQR-SFLPRTIRLWNELPS 202
AS T+R+ +R HP + + R S+ PRT++LWN LPS
Sbjct: 218 ASLLSPATSRYNTRSYHPNNYRLFSTHNQNYYRNSYFPRTVKLWNSLPS 266
>SB_38808| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 824
Score = 33.1 bits (72), Expect = 0.21
Identities = 20/58 (34%), Positives = 31/58 (53%)
Frame = +2
Query: 77 HRTARHRSRVHPYYLEPLRSSTVRFQRSFLPRTIRLWNELPSTVFPERYDMSFFKRGL 250
H+ R R+ H + +++ ++ SF PRTIR WN LP+ + E + FKR L
Sbjct: 760 HQDLRTRNS-HNFKCYQEKATKNKYFYSFFPRTIRHWNTLPNELV-ELGSIEHFKRDL 815
>SB_16492| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 295
Score = 32.3 bits (70), Expect = 0.36
Identities = 17/61 (27%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Frame = +2
Query: 23 HGECSEELFEMI-PASRFYHRTARHRSRVHPYYLEPLRSSTVRFQRSFLPRTIRLWNELP 199
+G+ S L ++ PA+ Y+ H + ++ + ++ S+ PRT++LWN LP
Sbjct: 210 NGDVSISLASLLSPATSRYNTRNYHSNNYRLFFTH----NQNYYRNSYFPRTVKLWNSLP 265
Query: 200 S 202
S
Sbjct: 266 S 266
>SB_37654| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 31.9 bits (69), Expect = 0.48
Identities = 16/39 (41%), Positives = 19/39 (48%)
Frame = +2
Query: 98 SRVHPYYLEPLRSSTVRFQRSFLPRTIRLWNELPSTVFP 214
S + Y L + F SF RTI +WN LP VFP
Sbjct: 809 SACNSYQFSLLPAKINAFLFSFYSRTIPVWNALPQAVFP 847
>SB_30049| Best HMM Match : FBA_2 (HMM E-Value=7)
Length = 282
Score = 31.5 bits (68), Expect = 0.63
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +2
Query: 128 LRSSTVRFQRSFLPRTIRLWNELPSTV 208
L+S+ + + SF R IR+WN LPS V
Sbjct: 227 LQSNILSYNYSFFARAIRIWNLLPSNV 253
>SB_24816| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 662
Score = 31.5 bits (68), Expect = 0.63
Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = +2
Query: 107 HPYYLEPLRSSTVRFQRSFLPRTIRLWNELP-STV 208
HP + T F+ SF P IR+WN LP ST+
Sbjct: 616 HPQRFALVSCKTNVFKESFFPHAIRMWNGLPVSTI 650
>SB_19530| Best HMM Match : EMI (HMM E-Value=3.5)
Length = 244
Score = 31.5 bits (68), Expect = 0.63
Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = +2
Query: 107 HPYYLEPLRSSTVRFQRSFLPRTIRLWNELP-STV 208
HP + T F+ SF P IR+WN LP ST+
Sbjct: 198 HPQRFALVSCKTNVFKESFFPHAIRMWNGLPVSTI 232
>SB_2897| Best HMM Match : RVT_1 (HMM E-Value=3e-33)
Length = 609
Score = 31.5 bits (68), Expect = 0.63
Identities = 18/43 (41%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +2
Query: 77 HRTARHR-SRVHPYYLEPLRSSTVRFQRSFLPRTIRLWNELPS 202
H+ R R S YY E +++ ++ SF PRTIR WN LP+
Sbjct: 543 HQDLRTRNSHNFKYYQE--KATKNKYFYSFFPRTIRHWNTLPN 583
>SB_40344| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 401
Score = 31.1 bits (67), Expect = 0.83
Identities = 18/40 (45%), Positives = 22/40 (55%)
Frame = +2
Query: 80 RTARHRSRVHPYYLEPLRSSTVRFQRSFLPRTIRLWNELP 199
RT + RS HP L T F+ SF RTI+ WN+LP
Sbjct: 346 RTRQLRSS-HPDKFIELCPRTEAFKNSFFCRTIKEWNKLP 384
>SB_7946| Best HMM Match : DUF434 (HMM E-Value=7.5)
Length = 294
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/40 (42%), Positives = 23/40 (57%)
Frame = +2
Query: 80 RTARHRSRVHPYYLEPLRSSTVRFQRSFLPRTIRLWNELP 199
RT + RS HP L +T ++ SF RTI+ WN+LP
Sbjct: 237 RTRQLRSS-HPDKFIELCPTTEAYKNSFFCRTIKEWNKLP 275
>SB_19427| Best HMM Match : RVT_1 (HMM E-Value=7.5e-32)
Length = 698
Score = 29.9 bits (64), Expect = 1.9
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +2
Query: 80 RTARHRSRVHPYYLEPLRSSTVRFQRSFLPRTIRLWNELP 199
RT + RS + ++E L T ++ SF RTI+ WN+LP
Sbjct: 643 RTRQLRSSLPDKFIE-LCPRTEAYKNSFFCRTIKEWNKLP 681
>SB_22775| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 29.1 bits (62), Expect = 3.4
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +2
Query: 128 LRSSTVRFQRSFLPRTIRLWN 190
L+++ F SF+PRTIR WN
Sbjct: 104 LQANVNAFDMSFIPRTIRTWN 124
>SB_8123| Best HMM Match : Tfb2 (HMM E-Value=0.00019)
Length = 448
Score = 29.1 bits (62), Expect = 3.4
Identities = 16/45 (35%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = +2
Query: 170 RTIRLWNELPSTVFPERYDM-SFFKRGLWRVLSGRQRLGSAPGIA 301
+ +R+W E+PS V +RY+M + F+ + L G + GS P I+
Sbjct: 59 KQLRIWREVPSGVH-KRYEMNATFRTNMKAALCGGESPGSNPIIS 102
>SB_47667| Best HMM Match : Ldl_recept_a (HMM E-Value=0)
Length = 3891
Score = 28.7 bits (61), Expect = 4.4
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +3
Query: 165 CHVPSGYGMSSPPRCFPSAMTCPSSNEA 248
C P GY + +P RC S +C SS A
Sbjct: 2147 CSCPQGYRLENPYRCVLSNASCASSEFA 2174
Score = 27.9 bits (59), Expect = 7.7
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +3
Query: 129 CGHPQCVSRDLFCHVPSGYGMSSPPRCFPSAMTCPS 236
C +C+SRD C + G SS + +TCP+
Sbjct: 3053 CPSGRCISRDWLCDGDNDCGDSSDEKAGECHVTCPA 3088
>SB_58576| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 28.3 bits (60), Expect = 5.9
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +2
Query: 128 LRSSTVRFQRSFLPRTIRLWN 190
L+++ F SF+PRTIR WN
Sbjct: 104 LQANVNAFGMSFIPRTIRTWN 124
>SB_56220| Best HMM Match : RVT_1 (HMM E-Value=3.7e-16)
Length = 453
Score = 28.3 bits (60), Expect = 5.9
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +2
Query: 128 LRSSTVRFQRSFLPRTIRLWN 190
L+++ F SF+PRTIR WN
Sbjct: 398 LQANVNAFGMSFIPRTIRTWN 418
>SB_48902| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 28.3 bits (60), Expect = 5.9
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +2
Query: 128 LRSSTVRFQRSFLPRTIRLWN 190
L+++ F SF+PRTIR WN
Sbjct: 104 LQANVNAFGMSFIPRTIRTWN 124
>SB_40983| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 28.3 bits (60), Expect = 5.9
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +2
Query: 128 LRSSTVRFQRSFLPRTIRLWN 190
L+++ F SF+PRTIR WN
Sbjct: 104 LQANVNAFGMSFIPRTIRTWN 124
>SB_40552| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 28.3 bits (60), Expect = 5.9
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +2
Query: 128 LRSSTVRFQRSFLPRTIRLWN 190
L+++ F SF+PRTIR WN
Sbjct: 104 LQANVNAFGMSFIPRTIRTWN 124
>SB_38731| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 28.3 bits (60), Expect = 5.9
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +2
Query: 128 LRSSTVRFQRSFLPRTIRLWN 190
L+++ F SF+PRTIR WN
Sbjct: 104 LQANVNAFGMSFIPRTIRTWN 124
>SB_38717| Best HMM Match : Cornifin (HMM E-Value=7.2)
Length = 318
Score = 28.3 bits (60), Expect = 5.9
Identities = 15/31 (48%), Positives = 17/31 (54%)
Frame = +3
Query: 273 SGLALPLALLKSMGDGNHSPSGGPYARLPTK 365
SG+ PLA S D H P GGP A PT+
Sbjct: 33 SGIFSPLASSTSASDSRHRPVGGP-AYSPTE 62
>SB_34180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 28.3 bits (60), Expect = 5.9
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +2
Query: 128 LRSSTVRFQRSFLPRTIRLWN 190
L+++ F SF+PRTIR WN
Sbjct: 104 LQANVNAFGMSFIPRTIRTWN 124
>SB_34116| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 522
Score = 28.3 bits (60), Expect = 5.9
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +2
Query: 128 LRSSTVRFQRSFLPRTIRLWN 190
L+++ F SF+PRTIR WN
Sbjct: 467 LQANVNAFGMSFIPRTIRTWN 487
>SB_33284| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 263
Score = 28.3 bits (60), Expect = 5.9
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +2
Query: 128 LRSSTVRFQRSFLPRTIRLWN 190
L+++ F SF+PRTIR WN
Sbjct: 208 LQANVNAFGMSFIPRTIRTWN 228
>SB_32643| Best HMM Match : Carla_C4 (HMM E-Value=9.9)
Length = 159
Score = 28.3 bits (60), Expect = 5.9
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +2
Query: 128 LRSSTVRFQRSFLPRTIRLWN 190
L+++ F SF+PRTIR WN
Sbjct: 104 LQANVNAFGMSFIPRTIRTWN 124
>SB_30890| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 28.3 bits (60), Expect = 5.9
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +2
Query: 128 LRSSTVRFQRSFLPRTIRLWN 190
L+++ F SF+PRTIR WN
Sbjct: 104 LQANVNAFGMSFIPRTIRTWN 124
>SB_29924| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 28.3 bits (60), Expect = 5.9
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +2
Query: 128 LRSSTVRFQRSFLPRTIRLWN 190
L+++ F SF+PRTIR WN
Sbjct: 104 LQANVNAFGMSFIPRTIRTWN 124
>SB_28979| Best HMM Match : RVT_1 (HMM E-Value=1.6e-40)
Length = 892
Score = 28.3 bits (60), Expect = 5.9
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +2
Query: 128 LRSSTVRFQRSFLPRTIRLWN 190
L+++ F SF+PRTIR WN
Sbjct: 837 LQANVNAFGMSFIPRTIRTWN 857
>SB_24244| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 28.3 bits (60), Expect = 5.9
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +2
Query: 128 LRSSTVRFQRSFLPRTIRLWN 190
L+++ F SF+PRTIR WN
Sbjct: 104 LQANVNAFGMSFIPRTIRTWN 124
>SB_22251| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 497
Score = 28.3 bits (60), Expect = 5.9
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +2
Query: 128 LRSSTVRFQRSFLPRTIRLWN 190
L+++ F SF+PRTIR WN
Sbjct: 442 LQANVNAFGMSFIPRTIRTWN 462
>SB_36764| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 28.3 bits (60), Expect = 5.9
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +2
Query: 128 LRSSTVRFQRSFLPRTIRLWN 190
L+++ F SF+PRTIR WN
Sbjct: 104 LQANVNAFGMSFIPRTIRTWN 124
>SB_36762| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 28.3 bits (60), Expect = 5.9
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +2
Query: 128 LRSSTVRFQRSFLPRTIRLWN 190
L+++ F SF+PRTIR WN
Sbjct: 104 LQANVNAFGMSFIPRTIRTWN 124
>SB_29800| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 28.3 bits (60), Expect = 5.9
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +2
Query: 128 LRSSTVRFQRSFLPRTIRLWN 190
L+++ F SF+PRTIR WN
Sbjct: 104 LQANVNAFGMSFIPRTIRTWN 124
>SB_24298| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 28.3 bits (60), Expect = 5.9
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +2
Query: 128 LRSSTVRFQRSFLPRTIRLWN 190
L+++ F SF+PRTIR WN
Sbjct: 104 LQANVNAFGMSFIPRTIRTWN 124
>SB_19305| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 28.3 bits (60), Expect = 5.9
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +2
Query: 128 LRSSTVRFQRSFLPRTIRLWN 190
L+++ F SF+PRTIR WN
Sbjct: 104 LQANVNAFGMSFIPRTIRTWN 124
>SB_14496| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 110
Score = 28.3 bits (60), Expect = 5.9
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +2
Query: 128 LRSSTVRFQRSFLPRTIRLWN 190
L+++ F SF+PRTIR WN
Sbjct: 55 LQANVNAFGMSFIPRTIRTWN 75
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,235,895
Number of Sequences: 59808
Number of extensions: 455459
Number of successful extensions: 1320
Number of sequences better than 10.0: 68
Number of HSP's better than 10.0 without gapping: 1252
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1319
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1693527500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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