Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P16_F_C06
(743 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF017415-2|AAB70263.1| 284|Tribolium castaneum abdominal-A prot... 25 0.64
AF017415-1|AAB70262.1| 343|Tribolium castaneum abdominal-AII pr... 25 0.64
AF017414-2|AAB70261.1| 150|Tribolium castaneum abdominal-A prot... 25 0.64
AF017414-1|AAB70260.1| 209|Tribolium castaneum abdominal-AII pr... 25 0.64
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 22 4.5
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 22 4.5
AY293621-1|AAP46162.1| 392|Tribolium castaneum glass protein pr... 22 4.5
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 22 4.5
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 22 4.5
AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc fin... 22 6.0
>AF017415-2|AAB70263.1| 284|Tribolium castaneum abdominal-A
protein.
Length = 284
Score = 25.0 bits (52), Expect = 0.64
Identities = 17/87 (19%), Positives = 39/87 (44%), Gaps = 1/87 (1%)
Frame = -1
Query: 722 HFHIVFHNQFGSFDRGISIECMAAIFSAIFIERAGSASSRVKRGLAGMYSSILPPEK-TP 546
H H FG+ G + ++ S+ +A+ + R AG+ +++ P +
Sbjct: 10 HHHQAAAAAFGAAASGSMVPSFSSTASSALAAAVDAATDKSCRYTAGLAANVTPADSMVN 69
Query: 545 WSFGPSLLSESKVNMTDSVTIASMALS 465
++ G + + V+ SV+ AS +++
Sbjct: 70 YTLGQHHHNGAAVSAASSVSAASASMA 96
>AF017415-1|AAB70262.1| 343|Tribolium castaneum abdominal-AII
protein.
Length = 343
Score = 25.0 bits (52), Expect = 0.64
Identities = 17/87 (19%), Positives = 39/87 (44%), Gaps = 1/87 (1%)
Frame = -1
Query: 722 HFHIVFHNQFGSFDRGISIECMAAIFSAIFIERAGSASSRVKRGLAGMYSSILPPEK-TP 546
H H FG+ G + ++ S+ +A+ + R AG+ +++ P +
Sbjct: 69 HHHQAAAAAFGAAASGSMVPSFSSTASSALAAAVDAATDKSCRYTAGLAANVTPADSMVN 128
Query: 545 WSFGPSLLSESKVNMTDSVTIASMALS 465
++ G + + V+ SV+ AS +++
Sbjct: 129 YTLGQHHHNGAAVSAASSVSAASASMA 155
>AF017414-2|AAB70261.1| 150|Tribolium castaneum abdominal-A
protein.
Length = 150
Score = 25.0 bits (52), Expect = 0.64
Identities = 17/87 (19%), Positives = 39/87 (44%), Gaps = 1/87 (1%)
Frame = -1
Query: 722 HFHIVFHNQFGSFDRGISIECMAAIFSAIFIERAGSASSRVKRGLAGMYSSILPPEK-TP 546
H H FG+ G + ++ S+ +A+ + R AG+ +++ P +
Sbjct: 10 HHHQAAAAAFGAAASGSMVPSFSSTASSALAAAVDAATDKSCRYTAGLAANVTPADSMVN 69
Query: 545 WSFGPSLLSESKVNMTDSVTIASMALS 465
++ G + + V+ SV+ AS +++
Sbjct: 70 YTLGQHHHNGAAVSAASSVSAASASMA 96
>AF017414-1|AAB70260.1| 209|Tribolium castaneum abdominal-AII
protein.
Length = 209
Score = 25.0 bits (52), Expect = 0.64
Identities = 17/87 (19%), Positives = 39/87 (44%), Gaps = 1/87 (1%)
Frame = -1
Query: 722 HFHIVFHNQFGSFDRGISIECMAAIFSAIFIERAGSASSRVKRGLAGMYSSILPPEK-TP 546
H H FG+ G + ++ S+ +A+ + R AG+ +++ P +
Sbjct: 69 HHHQAAAAAFGAAASGSMVPSFSSTASSALAAAVDAATDKSCRYTAGLAANVTPADSMVN 128
Query: 545 WSFGPSLLSESKVNMTDSVTIASMALS 465
++ G + + V+ SV+ AS +++
Sbjct: 129 YTLGQHHHNGAAVSAASSVSAASASMA 155
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 22.2 bits (45), Expect = 4.5
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +1
Query: 334 ESSPETELETVASKLVKKSMARSNSFSIEEP 426
ES+ ET+ ETV++ K N + IE+P
Sbjct: 1188 ESANETDSETVSTVPQNKRDDLVNPYWIEDP 1218
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 22.2 bits (45), Expect = 4.5
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +1
Query: 334 ESSPETELETVASKLVKKSMARSNSFSIEEP 426
ES+ ET+ ETV++ K N + IE+P
Sbjct: 1188 ESANETDSETVSTVPQNKRDDLVNPYWIEDP 1218
>AY293621-1|AAP46162.1| 392|Tribolium castaneum glass protein
protein.
Length = 392
Score = 22.2 bits (45), Expect = 4.5
Identities = 7/18 (38%), Positives = 12/18 (66%)
Frame = +2
Query: 230 QLNWSLGGSAAVSRTSCT 283
+ NWS G +A + ++CT
Sbjct: 17 ECNWSSGPNATLQSSACT 34
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
protein.
Length = 1558
Score = 22.2 bits (45), Expect = 4.5
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +1
Query: 334 ESSPETELETVASKLVKKSMARSNSFSIEEP 426
ES+ ET+ ETV++ K N + IE+P
Sbjct: 1188 ESANETDSETVSTVPQNKRDDLVNPYWIEDP 1218
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
protein.
Length = 1558
Score = 22.2 bits (45), Expect = 4.5
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +1
Query: 334 ESSPETELETVASKLVKKSMARSNSFSIEEP 426
ES+ ET+ ETV++ K N + IE+P
Sbjct: 1188 ESANETDSETVSTVPQNKRDDLVNPYWIEDP 1218
>AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc finger
protein protein.
Length = 456
Score = 21.8 bits (44), Expect = 6.0
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +2
Query: 515 SPRGGWARSSTESSLAGGSKSTYRP 589
SP+G + SST SSL ST P
Sbjct: 70 SPQGAPSPSSTPSSLPTQRTSTSNP 94
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,755
Number of Sequences: 336
Number of extensions: 3278
Number of successful extensions: 19
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 19819879
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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