Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_F_C06
         (743 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U64598-12|AAX88835.1|  408|Caenorhabditis elegans Choline kinase...   116   1e-26
U64598-11|AAK39220.1|  429|Caenorhabditis elegans Choline kinase...   116   1e-26
Z82259-2|CAB05129.1|  474|Caenorhabditis elegans Hypothetical pr...   101   7e-22
AF067937-2|AAF99916.1|  381|Caenorhabditis elegans Choline kinas...    76   3e-14
Z34533-6|CAA84300.2|  371|Caenorhabditis elegans Hypothetical pr...    66   2e-11
AY158690-1|AAN41642.1|  371|Caenorhabditis elegans choline kinas...    66   2e-11
Z34533-7|CAA84301.2|  369|Caenorhabditis elegans Hypothetical pr...    63   2e-10
AY158691-1|AAN41643.1|  369|Caenorhabditis elegans choline kinas...    63   2e-10
Z34533-9|CAA84303.2|  368|Caenorhabditis elegans Hypothetical pr...    58   5e-09
Z30973-5|CAA83224.2|  368|Caenorhabditis elegans Hypothetical pr...    58   5e-09
U58734-3|AAO91673.1|  326|Caenorhabditis elegans Choline kinase ...    36   0.023
U58734-2|AAB52502.1|  342|Caenorhabditis elegans Choline kinase ...    36   0.023
Z19158-1|CAA79574.1|  788|Caenorhabditis elegans Hypothetical pr...    31   1.1  

>U64598-12|AAX88835.1|  408|Caenorhabditis elegans Choline kinase a
           protein 2, isoformb protein.
          Length = 408

 Score =  116 bits (280), Expect = 1e-26
 Identities = 54/102 (52%), Positives = 76/102 (74%)
 Frame = +1

Query: 421 EPKKVLLRIYGQVHGERAMDAIVTESVIFTLLSERRLGPKLHGVFSGGRIEEYIPARPLL 600
           EP KVLLR+Y     E     +V ESVIFTLLSER LGPKL+G+FSGGR+EEYIP+RPL 
Sbjct: 83  EPNKVLLRVYFNPETE---SHLVAESVIFTLLSERHLGPKLYGIFSGGRLEEYIPSRPLS 139

Query: 601 TRELAEPALSMKIAEKMAAIHSMDIPLSKEPNWLWKTMWKWL 726
             E++   +S KIA+++A +H +++P+ KEP++L + + +WL
Sbjct: 140 CHEISLAHMSTKIAKRVAKVHQLEVPIWKEPDYLCEALQRWL 181



 Score = 47.6 bits (108), Expect = 9e-06
 Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 7/83 (8%)
 Frame = +1

Query: 154 TEAEMREVAARICRNYLHGAWKSVDPTELEFRRISGGLSNFLYYVALPE-------DPSK 312
           T  E++E A  +C  +L GAWK+V    L   RI GG+SN L+   L E       +P+K
Sbjct: 27  TIPELKERAHMLCARFLGGAWKTVPLEHLRISRIKGGMSNMLFLCRLSEVYPPIRNEPNK 86

Query: 313 LCTFTKRESSPETELETVASKLV 381
           +    +   +PETE   VA  ++
Sbjct: 87  V--LLRVYFNPETESHLVAESVI 107


>U64598-11|AAK39220.1|  429|Caenorhabditis elegans Choline kinase a
           protein 2, isoforma protein.
          Length = 429

 Score =  116 bits (280), Expect = 1e-26
 Identities = 54/102 (52%), Positives = 76/102 (74%)
 Frame = +1

Query: 421 EPKKVLLRIYGQVHGERAMDAIVTESVIFTLLSERRLGPKLHGVFSGGRIEEYIPARPLL 600
           EP KVLLR+Y     E     +V ESVIFTLLSER LGPKL+G+FSGGR+EEYIP+RPL 
Sbjct: 104 EPNKVLLRVYFNPETE---SHLVAESVIFTLLSERHLGPKLYGIFSGGRLEEYIPSRPLS 160

Query: 601 TRELAEPALSMKIAEKMAAIHSMDIPLSKEPNWLWKTMWKWL 726
             E++   +S KIA+++A +H +++P+ KEP++L + + +WL
Sbjct: 161 CHEISLAHMSTKIAKRVAKVHQLEVPIWKEPDYLCEALQRWL 202



 Score = 47.6 bits (108), Expect = 9e-06
 Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 7/83 (8%)
 Frame = +1

Query: 154 TEAEMREVAARICRNYLHGAWKSVDPTELEFRRISGGLSNFLYYVALPE-------DPSK 312
           T  E++E A  +C  +L GAWK+V    L   RI GG+SN L+   L E       +P+K
Sbjct: 48  TIPELKERAHMLCARFLGGAWKTVPLEHLRISRIKGGMSNMLFLCRLSEVYPPIRNEPNK 107

Query: 313 LCTFTKRESSPETELETVASKLV 381
           +    +   +PETE   VA  ++
Sbjct: 108 V--LLRVYFNPETESHLVAESVI 128


>Z82259-2|CAB05129.1|  474|Caenorhabditis elegans Hypothetical
           protein C28D4.2 protein.
          Length = 474

 Score =  101 bits (241), Expect = 7e-22
 Identities = 51/102 (50%), Positives = 72/102 (70%)
 Frame = +1

Query: 421 EPKKVLLRIYGQVHGERAMDAIVTESVIFTLLSERRLGPKLHGVFSGGRIEEYIPARPLL 600
           EP+K LLR    VH +  +D +++ESV+FTLLSER LGPK+ GVF GGR E++IP+R L 
Sbjct: 140 EPEKALLR----VHCQSDIDQLLSESVVFTLLSERNLGPKMLGVFPGGRFEQFIPSRALQ 195

Query: 601 TRELAEPALSMKIAEKMAAIHSMDIPLSKEPNWLWKTMWKWL 726
             E+++P LS  IA  +A +H++D P+ KEP  L +T  +WL
Sbjct: 196 CLEISKPGLSKLIAPIVARVHTLDAPIPKEPQTL-QTARQWL 236



 Score = 44.0 bits (99), Expect = 1e-04
 Identities = 18/37 (48%), Positives = 23/37 (62%)
 Frame = +1

Query: 187 ICRNYLHGAWKSVDPTELEFRRISGGLSNFLYYVALP 297
           +C  YL GAW+ V   E   R I+GG+SN L+ V LP
Sbjct: 95  LCAKYLGGAWRKVKIEEFRIRAITGGMSNLLFLVELP 131


>AF067937-2|AAF99916.1|  381|Caenorhabditis elegans Choline kinase b
           protein 4 protein.
          Length = 381

 Score = 75.8 bits (178), Expect = 3e-14
 Identities = 38/113 (33%), Positives = 66/113 (58%)
 Frame = +1

Query: 349 TELETVASKLVKKSMARSNSFSIEEPKKVLLRIYGQVHGERAMDAIVTESVIFTLLSERR 528
           T++    S ++  + + S   S + P   L+RI+ Q     A   + TE+V+F++LSER 
Sbjct: 46  TQITGGQSNILYLATSASTKLSPDTPSCFLIRIHRQ-----APSQVFTETVVFSVLSERG 100

Query: 529 LGPKLHGVFSGGRIEEYIPARPLLTRELAEPALSMKIAEKMAAIHSMDIPLSK 687
           LGPKL+G F GGR+EE++P+R L    +  P ++ ++       H +++P+SK
Sbjct: 101 LGPKLYGFFPGGRLEEFLPSRTLDVDSIKLPEIARQVGSLYPKYHDIEVPISK 153



 Score = 34.7 bits (76), Expect = 0.070
 Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 6/70 (8%)
 Frame = +1

Query: 196 NYLHGAWKSVDPTELEFRRISGGLSNFLYYVA------LPEDPSKLCTFTKRESSPETEL 357
           +YL G W  V+ +E+   +I+GG SN LY          P+ PS       R++  +   
Sbjct: 29  DYLRGGWALVEKSEVTVTQITGGQSNILYLATSASTKLSPDTPSCFLIRIHRQAPSQVFT 88

Query: 358 ETVASKLVKK 387
           ETV   ++ +
Sbjct: 89  ETVVFSVLSE 98


>Z34533-6|CAA84300.2|  371|Caenorhabditis elegans Hypothetical
           protein B0285.8 protein.
          Length = 371

 Score = 66.1 bits (154), Expect = 2e-11
 Identities = 34/85 (40%), Positives = 53/85 (62%)
 Frame = +1

Query: 436 LLRIYGQVHGERAMDAIVTESVIFTLLSERRLGPKLHGVFSGGRIEEYIPARPLLTRELA 615
           LLRI+ Q      MD     +V F + SER LGPKL+G F GGR+EE++P+R L +  + 
Sbjct: 68  LLRIHRQGPSHVFMD-----TVNFAIFSERGLGPKLYGFFDGGRMEEFLPSRTLDSDCIL 122

Query: 616 EPALSMKIAEKMAAIHSMDIPLSKE 690
           +P +S ++       H++D+P+SK+
Sbjct: 123 DPEISRRVGAVYPKYHAIDVPVSKK 147


>AY158690-1|AAN41642.1|  371|Caenorhabditis elegans choline kinase
           CKB-1 protein.
          Length = 371

 Score = 66.1 bits (154), Expect = 2e-11
 Identities = 34/85 (40%), Positives = 53/85 (62%)
 Frame = +1

Query: 436 LLRIYGQVHGERAMDAIVTESVIFTLLSERRLGPKLHGVFSGGRIEEYIPARPLLTRELA 615
           LLRI+ Q      MD     +V F + SER LGPKL+G F GGR+EE++P+R L +  + 
Sbjct: 68  LLRIHRQGPSHVFMD-----TVNFAIFSERGLGPKLYGFFDGGRMEEFLPSRTLDSDCIL 122

Query: 616 EPALSMKIAEKMAAIHSMDIPLSKE 690
           +P +S ++       H++D+P+SK+
Sbjct: 123 DPEISRRVGAVYPKYHAIDVPVSKK 147


>Z34533-7|CAA84301.2|  369|Caenorhabditis elegans Hypothetical
           protein B0285.9 protein.
          Length = 369

 Score = 63.3 bits (147), Expect = 2e-10
 Identities = 35/97 (36%), Positives = 55/97 (56%)
 Frame = +1

Query: 436 LLRIYGQVHGERAMDAIVTESVIFTLLSERRLGPKLHGVFSGGRIEEYIPARPLLTRELA 615
           LLRI+ Q   +     + T++V   + SER LGPKL+G F GGR+EE++P++     ++ 
Sbjct: 68  LLRIHRQPPSQ-----VFTDTVNLAIFSERGLGPKLYGFFEGGRMEEFLPSKTFDVNDVL 122

Query: 616 EPALSMKIAEKMAAIHSMDIPLSKEPNWLWKTMWKWL 726
            P  S KI       HS+++P+SK    +   M +WL
Sbjct: 123 VPENSRKIGAIFPLYHSINVPVSKSRRCV-HLMREWL 158


>AY158691-1|AAN41643.1|  369|Caenorhabditis elegans choline kinase
           CKB-2 protein.
          Length = 369

 Score = 63.3 bits (147), Expect = 2e-10
 Identities = 35/97 (36%), Positives = 55/97 (56%)
 Frame = +1

Query: 436 LLRIYGQVHGERAMDAIVTESVIFTLLSERRLGPKLHGVFSGGRIEEYIPARPLLTRELA 615
           LLRI+ Q   +     + T++V   + SER LGPKL+G F GGR+EE++P++     ++ 
Sbjct: 68  LLRIHRQPPSQ-----VFTDTVNLAIFSERGLGPKLYGFFEGGRMEEFLPSKTFDVNDVL 122

Query: 616 EPALSMKIAEKMAAIHSMDIPLSKEPNWLWKTMWKWL 726
            P  S KI       HS+++P+SK    +   M +WL
Sbjct: 123 VPENSRKIGAIFPLYHSINVPVSKSRRCV-HLMREWL 158


>Z34533-9|CAA84303.2|  368|Caenorhabditis elegans Hypothetical
           protein B0285.10 protein.
          Length = 368

 Score = 58.4 bits (135), Expect = 5e-09
 Identities = 26/66 (39%), Positives = 41/66 (62%)
 Frame = +1

Query: 490 TESVIFTLLSERRLGPKLHGVFSGGRIEEYIPARPLLTRELAEPALSMKIAEKMAAIHSM 669
           T+ V F + SER LGPKL+G F  GR+EE++P+  L   ++    +S KI       H++
Sbjct: 81  TDIVNFAIFSERGLGPKLYGFFEEGRMEEFLPSVTLKLNDVLNTEISRKIGAAFPKYHAI 140

Query: 670 DIPLSK 687
           ++P+SK
Sbjct: 141 NVPVSK 146


>Z30973-5|CAA83224.2|  368|Caenorhabditis elegans Hypothetical
           protein B0285.10 protein.
          Length = 368

 Score = 58.4 bits (135), Expect = 5e-09
 Identities = 26/66 (39%), Positives = 41/66 (62%)
 Frame = +1

Query: 490 TESVIFTLLSERRLGPKLHGVFSGGRIEEYIPARPLLTRELAEPALSMKIAEKMAAIHSM 669
           T+ V F + SER LGPKL+G F  GR+EE++P+  L   ++    +S KI       H++
Sbjct: 81  TDIVNFAIFSERGLGPKLYGFFEEGRMEEFLPSVTLKLNDVLNTEISRKIGAAFPKYHAI 140

Query: 670 DIPLSK 687
           ++P+SK
Sbjct: 141 NVPVSK 146


>U58734-3|AAO91673.1|  326|Caenorhabditis elegans Choline kinase c
           protein 1, isoformb protein.
          Length = 326

 Score = 36.3 bits (80), Expect = 0.023
 Identities = 27/109 (24%), Positives = 49/109 (44%)
 Frame = +1

Query: 340 SPETELETVASKLVKKSMARSNSFSIEEPKKVLLRIYGQVHGERAMDAIVTESVIFTLLS 519
           SPE   E  +  +  K    S  F  E    V+ R++G  H    +     E + +  L+
Sbjct: 38  SPEITFEYFSVGITNKIF--SAGFGTEH---VIFRVFG--HNTNKVIDRENEVIAWKQLA 90

Query: 520 ERRLGPKLHGVFSGGRIEEYIPARPLLTRELAEPALSMKIAEKMAAIHS 666
           E      L+G F+ G I  ++  + L   ++ +   +M IA+++A +HS
Sbjct: 91  EYGFAAPLYGKFNNGLICGFLEGKSLAIEQMRDSKFNMNIAKRIAQLHS 139


>U58734-2|AAB52502.1|  342|Caenorhabditis elegans Choline kinase c
           protein 1, isoforma protein.
          Length = 342

 Score = 36.3 bits (80), Expect = 0.023
 Identities = 27/109 (24%), Positives = 49/109 (44%)
 Frame = +1

Query: 340 SPETELETVASKLVKKSMARSNSFSIEEPKKVLLRIYGQVHGERAMDAIVTESVIFTLLS 519
           SPE   E  +  +  K    S  F  E    V+ R++G  H    +     E + +  L+
Sbjct: 38  SPEITFEYFSVGITNKIF--SAGFGTEH---VIFRVFG--HNTNKVIDRENEVIAWKQLA 90

Query: 520 ERRLGPKLHGVFSGGRIEEYIPARPLLTRELAEPALSMKIAEKMAAIHS 666
           E      L+G F+ G I  ++  + L   ++ +   +M IA+++A +HS
Sbjct: 91  EYGFAAPLYGKFNNGLICGFLEGKSLAIEQMRDSKFNMNIAKRIAQLHS 139


>Z19158-1|CAA79574.1|  788|Caenorhabditis elegans Hypothetical
           protein T23G5.1 protein.
          Length = 788

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 20/76 (26%), Positives = 38/76 (50%)
 Frame = +1

Query: 376 LVKKSMARSNSFSIEEPKKVLLRIYGQVHGERAMDAIVTESVIFTLLSERRLGPKLHGVF 555
           L +  + + N   +E P+++L+R+   +HG+    AI T    + L+SER +      +F
Sbjct: 157 LERSYLLKINKEIVERPQQMLMRVSIGIHGDDITSAIET----YNLMSERYMTHASPTLF 212

Query: 556 SGGRIEEYIPARPLLT 603
           + G     + +  LLT
Sbjct: 213 NSGTCRPQMSSCFLLT 228


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,702,568
Number of Sequences: 27780
Number of extensions: 313776
Number of successful extensions: 1010
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 899
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1007
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1756472266
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)