Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_F_C05
         (764 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    26   0.29 
AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like pr...    26   0.38 
AM295016-1|CAL25731.1|   96|Tribolium castaneum ecdysone recepto...    25   0.88 
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    24   1.2  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    23   2.0  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   4.7  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    22   4.7  
AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    22   6.2  
AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    22   6.2  
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    22   6.2  

>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 26.2 bits (55), Expect = 0.29
 Identities = 20/81 (24%), Positives = 38/81 (46%), Gaps = 4/81 (4%)
 Frame = -2

Query: 439 IHFLLHSATFLYDCQYLWMILHCFLDILIVYLLRNRDDNLCYHSK--LINQFSNPEICRK 266
           ++F+LH     + C Y W++L+    +  V L++     +    K  ++NQ+   ++C+ 
Sbjct: 150 LNFMLHCNNTTWRCLYRWIVLYTLSKMSQVMLIQFCAFVVVLKQKFCVVNQYIK-QVCKL 208

Query: 265 NH-RTKQFRSH-RHFHQTFLV 209
           N+   K F S     H   LV
Sbjct: 209 NNGHYKNFLSQVEIIHNEILV 229


>AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like
           protein protein.
          Length = 242

 Score = 25.8 bits (54), Expect = 0.38
 Identities = 15/39 (38%), Positives = 22/39 (56%)
 Frame = +1

Query: 181 LKKMPKIPYKPEKSGGNDDDYEIVSFDDFSDKSPGSKTD 297
           LKK  K+ ++P K+  +DDD  +VS  D  +K    K D
Sbjct: 142 LKKENKMTWEP-KNKTDDDDDALVSDSDDREKDEEDKRD 179


>AM295016-1|CAL25731.1|   96|Tribolium castaneum ecdysone receptor
           (isoform B) protein.
          Length = 96

 Score = 24.6 bits (51), Expect = 0.88
 Identities = 11/39 (28%), Positives = 21/39 (53%)
 Frame = +2

Query: 377 ENHPKVLTVIQKRR*MEQEMDHSENYQILLSHSENPAGR 493
           +NHP+ LT+IQ    +      + N+ +  S + + +GR
Sbjct: 52  QNHPRGLTIIQNGYGLPGHTIIASNHHLAKSDTSSASGR 90


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 10/32 (31%), Positives = 18/32 (56%)
 Frame = +2

Query: 431 EMDHSENYQILLSHSENPAGRLTRRYLAALSL 526
           ++   EN+ + +      AG+L R +LAA S+
Sbjct: 73  DLGRHENFSLFIPKHRKVAGKLIRIFLAAESI 104


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 7/13 (53%), Positives = 12/13 (92%)
 Frame = -2

Query: 643 WLVHLNQFQASYR 605
           WL ++NQF+A++R
Sbjct: 406 WLNYINQFEANFR 418


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = -2

Query: 382 ILHCFLDILIVYLLRNR 332
           ++HC+L   +V +L+NR
Sbjct: 535 VVHCYLASELVLMLKNR 551


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 8/26 (30%), Positives = 16/26 (61%)
 Frame = -2

Query: 277 ICRKNHRTKQFRSHRHFHQTFLVYMV 200
           +CR  H  + F+++ HF    L+Y++
Sbjct: 147 LCR--HTVEYFQNYIHFFYQLLLYLI 170


>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 12/34 (35%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
 Frame = -2

Query: 322 LCYHSKLINQFSNPEICRKNHRTKQFRSHRH-FH 224
           LC  S L       E+ R +  T+ F +HR  FH
Sbjct: 226 LCVVSTLSCYLERTELLRSSGETRLFLTHRKPFH 259


>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = -3

Query: 720 LLAPGPTDGTADCPITCKGQPAQQDYG 640
           L+ P P     D P   + +P +QD G
Sbjct: 15  LMPPQPYMNAQDAPAGGENEPRKQDIG 41


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -2

Query: 709 RTHRWYRRLPNNLQGTTRTT 650
           RTH  +    +N +GT RTT
Sbjct: 277 RTHTRHTTTSHNTRGTPRTT 296


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 186,615
Number of Sequences: 336
Number of extensions: 4325
Number of successful extensions: 13
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20546262
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)