Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P16_F_C05
(764 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024860-3|AAK29985.1| 345|Caenorhabditis elegans Hypothetical ... 33 0.29
AC024859-23|ABD63209.1| 299|Caenorhabditis elegans Hypothetical... 33 0.29
AF025465-6|AAB71030.1| 299|Caenorhabditis elegans Hypothetical ... 32 0.51
DQ178237-1|ABA18179.1| 1161|Caenorhabditis elegans sodium depend... 31 0.90
U64859-10|AAC69091.2| 383|Caenorhabditis elegans Hypothetical p... 29 2.7
U00031-9|AAK18871.1| 470|Caenorhabditis elegans Hypothetical pr... 29 2.7
U58727-4|AAB00584.2| 148|Caenorhabditis elegans Hypothetical pr... 29 3.6
U28735-11|AAM69114.1| 358|Caenorhabditis elegans Hypothetical p... 29 4.8
U28735-10|AAM69112.1| 2427|Caenorhabditis elegans Hypothetical p... 29 4.8
U28735-9|AAM69113.1| 1299|Caenorhabditis elegans Hypothetical pr... 29 4.8
Z70205-11|CAD44096.1| 409|Caenorhabditis elegans Hypothetical p... 28 6.3
Z70205-10|CAA94122.2| 887|Caenorhabditis elegans Hypothetical p... 28 6.3
Z68003-6|CAD44105.1| 409|Caenorhabditis elegans Hypothetical pr... 28 6.3
Z68003-5|CAA91979.2| 887|Caenorhabditis elegans Hypothetical pr... 28 6.3
AC006720-7|AAF60444.1| 511|Caenorhabditis elegans Cytochrome p4... 28 6.3
Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical p... 28 8.4
U97008-4|AAB52312.1| 430|Caenorhabditis elegans Hypothetical pr... 28 8.4
U41263-2|ABB88212.1| 1015|Caenorhabditis elegans Hypothetical pr... 28 8.4
U41263-1|AAC24429.1| 1028|Caenorhabditis elegans Hypothetical pr... 28 8.4
AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical ... 28 8.4
AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha... 28 8.4
>AC024860-3|AAK29985.1| 345|Caenorhabditis elegans Hypothetical
protein Y71H2AR.2 protein.
Length = 345
Score = 32.7 bits (71), Expect = 0.29
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +1
Query: 676 YWAVGGTIGGSWGEEHYXKL 735
YW V G+ G SWGE+ Y KL
Sbjct: 260 YWIVKGSFGTSWGEQGYMKL 279
>AC024859-23|ABD63209.1| 299|Caenorhabditis elegans Hypothetical
protein Y71H2AM.25 protein.
Length = 299
Score = 32.7 bits (71), Expect = 0.29
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +1
Query: 676 YWAVGGTIGGSWGEEHYXKL 735
YW V G+ G SWGE+ Y KL
Sbjct: 260 YWIVKGSFGTSWGEQGYMKL 279
>AF025465-6|AAB71030.1| 299|Caenorhabditis elegans Hypothetical
protein K02E7.10 protein.
Length = 299
Score = 31.9 bits (69), Expect = 0.51
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = +1
Query: 676 YWAVGGTIGGSWGEEHYXKL 735
YW V G+ G SWGE Y KL
Sbjct: 258 YWIVKGSFGTSWGEHGYMKL 277
>DQ178237-1|ABA18179.1| 1161|Caenorhabditis elegans sodium dependent
chloride bicarbonateanion exchanger alternative variant
a protein.
Length = 1161
Score = 31.1 bits (67), Expect = 0.90
Identities = 19/56 (33%), Positives = 26/56 (46%)
Frame = +2
Query: 422 MEQEMDHSENYQILLSHSENPAGRLTRRYLAALSLRMKMNLHLENTDINDFQKIAR 589
ME+E D +I S S P G +R + SL M M +H+EN+ K R
Sbjct: 1 MEEETDEESPAKIARSRSCEPPGSSSRSRESRGSLWMSMGVHVENSRRRRMSKARR 56
>U64859-10|AAC69091.2| 383|Caenorhabditis elegans Hypothetical
protein R09F10.1 protein.
Length = 383
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +1
Query: 625 GSSVLAIILLCGLSLASYWAVGGTIGGSWGEEHYXKL 735
G+ L II G ++YW V + G SWG Y +L
Sbjct: 328 GAHALTIIGYGGEGESAYWIVKNSWGTSWGASGYFRL 364
>U00031-9|AAK18871.1| 470|Caenorhabditis elegans Hypothetical
protein B0361.8 protein.
Length = 470
Score = 29.5 bits (63), Expect = 2.7
Identities = 18/64 (28%), Positives = 26/64 (40%)
Frame = +1
Query: 553 EHRYQRFSENSTFMQRVCDMMPGTGSSVLAIILLCGLSLASYWAVGGTIGGSWGEEHYXK 732
E R + F+ +ST Q + G + C LA A G + GSW + H
Sbjct: 189 ESRQETFNNSSTIAQ---SNVLSWGKLTYYRLFACLYWLAGKAAHVGMVNGSWTQRHITS 245
Query: 733 LWER 744
+W R
Sbjct: 246 IWSR 249
>U58727-4|AAB00584.2| 148|Caenorhabditis elegans Hypothetical
protein D1005.5 protein.
Length = 148
Score = 29.1 bits (62), Expect = 3.6
Identities = 15/34 (44%), Positives = 23/34 (67%)
Frame = +2
Query: 332 SITKQINNQNI*KTMENHPKVLTVIQKRR*MEQE 433
SI ++ + I K++ NHPKVL VI+KR +E +
Sbjct: 13 SIQILMSGEKIPKSILNHPKVLFVIKKRIPIENQ 46
>U28735-11|AAM69114.1| 358|Caenorhabditis elegans Hypothetical
protein F48E3.8c protein.
Length = 358
Score = 28.7 bits (61), Expect = 4.8
Identities = 13/45 (28%), Positives = 20/45 (44%)
Frame = +3
Query: 609 YDAWNWFKCTSHNLVVRVVPCKLLGSRRYHRWVLGRGALXETMGE 743
YD W T+H + V + + L R RW + + ET+ E
Sbjct: 103 YDQSLWLHSTNHEIGVNSITREDLSGRTQERWYKEQKGMRETLAE 147
>U28735-10|AAM69112.1| 2427|Caenorhabditis elegans Hypothetical
protein F48E3.8a protein.
Length = 2427
Score = 28.7 bits (61), Expect = 4.8
Identities = 13/45 (28%), Positives = 20/45 (44%)
Frame = +3
Query: 609 YDAWNWFKCTSHNLVVRVVPCKLLGSRRYHRWVLGRGALXETMGE 743
YD W T+H + V + + L R RW + + ET+ E
Sbjct: 2172 YDQSLWLHSTNHEIGVNSITREDLSGRTQERWYKEQKGMRETLAE 2216
>U28735-9|AAM69113.1| 1299|Caenorhabditis elegans Hypothetical protein
F48E3.8b protein.
Length = 1299
Score = 28.7 bits (61), Expect = 4.8
Identities = 13/45 (28%), Positives = 20/45 (44%)
Frame = +3
Query: 609 YDAWNWFKCTSHNLVVRVVPCKLLGSRRYHRWVLGRGALXETMGE 743
YD W T+H + V + + L R RW + + ET+ E
Sbjct: 1044 YDQSLWLHSTNHEIGVNSITREDLSGRTQERWYKEQKGMRETLAE 1088
>Z70205-11|CAD44096.1| 409|Caenorhabditis elegans Hypothetical
protein E02H4.3b protein.
Length = 409
Score = 28.3 bits (60), Expect = 6.3
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = -2
Query: 745 FSPIVSXNAPRPRTHRWYRRLPNNLQ 668
F P+ P HR++ RLP NL+
Sbjct: 368 FEPLARMKLPEALQHRYFNRLPENLK 393
>Z70205-10|CAA94122.2| 887|Caenorhabditis elegans Hypothetical
protein E02H4.3a protein.
Length = 887
Score = 28.3 bits (60), Expect = 6.3
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = -2
Query: 745 FSPIVSXNAPRPRTHRWYRRLPNNLQ 668
F P+ P HR++ RLP NL+
Sbjct: 846 FEPLARMKLPEALQHRYFNRLPENLK 871
>Z68003-6|CAD44105.1| 409|Caenorhabditis elegans Hypothetical
protein E02H4.3b protein.
Length = 409
Score = 28.3 bits (60), Expect = 6.3
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = -2
Query: 745 FSPIVSXNAPRPRTHRWYRRLPNNLQ 668
F P+ P HR++ RLP NL+
Sbjct: 368 FEPLARMKLPEALQHRYFNRLPENLK 393
>Z68003-5|CAA91979.2| 887|Caenorhabditis elegans Hypothetical
protein E02H4.3a protein.
Length = 887
Score = 28.3 bits (60), Expect = 6.3
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = -2
Query: 745 FSPIVSXNAPRPRTHRWYRRLPNNLQ 668
F P+ P HR++ RLP NL+
Sbjct: 846 FEPLARMKLPEALQHRYFNRLPENLK 871
>AC006720-7|AAF60444.1| 511|Caenorhabditis elegans Cytochrome p450
family protein 31A3 protein.
Length = 511
Score = 28.3 bits (60), Expect = 6.3
Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +1
Query: 571 FSENSTFM-QRVCDMMPGTGSSVLAIILLCGLSLASYWAVGGTIGGSWGEEH 723
F+E S + Q++C + VL++I LC L + ++G IG E +
Sbjct: 148 FNEQSKILVQKMCSLGAEEEVDVLSVITLCTLDIICETSMGKAIGAQLAENN 199
>Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 27.9 bits (59), Expect = 8.4
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +1
Query: 328 RLYYEADKQSKYLENNGESSKGIDSHTETSLNGARNGSFR 447
R YYE QS +L N + ++ ETSL G+ G+ R
Sbjct: 2875 RNYYEVSTQSSHLVMNPNGEETVEKTCETSL-GSLQGAVR 2913
>U97008-4|AAB52312.1| 430|Caenorhabditis elegans Hypothetical
protein C03G6.12 protein.
Length = 430
Score = 27.9 bits (59), Expect = 8.4
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = -2
Query: 376 HCFLDILIVYLLRNRDDNLCYHSKLINQFS 287
+CF DILI + LRN D + ++LI F+
Sbjct: 363 YCFADILINHCLRNYTDGPGHFAELIGIFN 392
>U41263-2|ABB88212.1| 1015|Caenorhabditis elegans Hypothetical
protein T19D12.4b protein.
Length = 1015
Score = 27.9 bits (59), Expect = 8.4
Identities = 13/31 (41%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
Frame = -2
Query: 367 LDILIVYLLRNRD-DNLCYHSKLINQFSNPE 278
LD+ ++ L+N+D D + Y +KL+NQFS +
Sbjct: 776 LDVAVLVDLQNKDYDFMNYITKLLNQFSTQD 806
>U41263-1|AAC24429.1| 1028|Caenorhabditis elegans Hypothetical
protein T19D12.4a protein.
Length = 1028
Score = 27.9 bits (59), Expect = 8.4
Identities = 13/31 (41%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
Frame = -2
Query: 367 LDILIVYLLRNRD-DNLCYHSKLINQFSNPE 278
LD+ ++ L+N+D D + Y +KL+NQFS +
Sbjct: 789 LDVAVLVDLQNKDYDFMNYITKLLNQFSTQD 819
>AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 27.9 bits (59), Expect = 8.4
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +1
Query: 328 RLYYEADKQSKYLENNGESSKGIDSHTETSLNGARNGSFR 447
R YYE QS +L N + ++ ETSL G+ G+ R
Sbjct: 2875 RNYYEVSTQSSHLVMNPNGEETVEKTCETSL-GSLQGAVR 2913
>AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3102
Score = 27.9 bits (59), Expect = 8.4
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +1
Query: 328 RLYYEADKQSKYLENNGESSKGIDSHTETSLNGARNGSFR 447
R YYE QS +L N + ++ ETSL G+ G+ R
Sbjct: 2875 RNYYEVSTQSSHLVMNPNGEETVEKTCETSL-GSLQGAVR 2913
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,099,267
Number of Sequences: 27780
Number of extensions: 397696
Number of successful extensions: 1374
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1296
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1374
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1830096852
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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