Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P16_F_C03
(721 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_56457| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 4e-04
SB_42728| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.54
SB_11425| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.54
SB_7392| Best HMM Match : Ricin_B_lectin (HMM E-Value=4.6e-32) 32 0.54
SB_58669| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.94
SB_33095| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.94
SB_58680| Best HMM Match : Sas10_Utp3 (HMM E-Value=0.13) 31 1.2
SB_6600| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_22633| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_49742| Best HMM Match : Dam (HMM E-Value=5.8) 30 2.2
SB_45378| Best HMM Match : DUF843 (HMM E-Value=4.7) 30 2.2
SB_17041| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_32879| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_10355| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0037) 29 3.8
SB_14664| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_29782| Best HMM Match : RnaseH (HMM E-Value=0.15) 29 5.0
SB_7623| Best HMM Match : SURF6 (HMM E-Value=2.6) 29 5.0
SB_47305| Best HMM Match : I-set (HMM E-Value=0) 29 5.0
SB_30333| Best HMM Match : DUF1168 (HMM E-Value=3.6) 29 5.0
SB_2434| Best HMM Match : Vicilin_N (HMM E-Value=0.01) 29 5.0
SB_20802| Best HMM Match : Phage_integr_N (HMM E-Value=1.2) 28 6.6
SB_34371| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.8
SB_29723| Best HMM Match : EGF_2 (HMM E-Value=0.55) 28 8.8
>SB_56457| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 42.3 bits (95), Expect = 4e-04
Identities = 18/38 (47%), Positives = 26/38 (68%)
Frame = +2
Query: 527 KAMERDKKNYYQETWKQLRSKIKTFMGIPAQYSVYLQE 640
KAM +DK+NYYQ T KQL+ K + F+ +S YL++
Sbjct: 74 KAMSKDKENYYQHTPKQLKRKCEAFLRSSQDFSEYLKD 111
>SB_42728| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 138
Score = 31.9 bits (69), Expect = 0.54
Identities = 17/67 (25%), Positives = 32/67 (47%)
Frame = +2
Query: 224 EAWNNKKTSARNLREMGLVSDPNKTIKIPNFKQTQIQRAKQMVNQIDSDEEVETVVRLPP 403
E W K + ++L L PNK ++I +F+ T + + ++ Q E V P
Sbjct: 47 ETWKPKSKNTKHLDSHELSIPPNKLLRIQDFQSTYVTQIPRIAQQ---GENGAKVFNSPS 103
Query: 404 KKEVAEK 424
+KE+ ++
Sbjct: 104 EKEIEKE 110
>SB_11425| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 339
Score = 31.9 bits (69), Expect = 0.54
Identities = 16/36 (44%), Positives = 21/36 (58%)
Frame = +2
Query: 353 NQIDSDEEVETVVRLPPKKEVAEKLEKQAKAPRKRK 460
NQ D DE+ ET +E+A+ LEK K P KR+
Sbjct: 84 NQTDQDEDEETNSFKITAEEIAKNLEKYKKRPAKRQ 119
>SB_7392| Best HMM Match : Ricin_B_lectin (HMM E-Value=4.6e-32)
Length = 594
Score = 31.9 bits (69), Expect = 0.54
Identities = 17/67 (25%), Positives = 32/67 (47%)
Frame = +2
Query: 224 EAWNNKKTSARNLREMGLVSDPNKTIKIPNFKQTQIQRAKQMVNQIDSDEEVETVVRLPP 403
E W K + ++L L PNK ++I +F+ T + + ++ Q E V P
Sbjct: 23 ETWKPKSKNTKHLDSHELSIPPNKLLRIQDFQSTYVTQIPRIAQQ---GENGAKVFNSPS 79
Query: 404 KKEVAEK 424
+KE+ ++
Sbjct: 80 EKEIEKE 86
>SB_58669| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3038
Score = 31.1 bits (67), Expect = 0.94
Identities = 28/110 (25%), Positives = 51/110 (46%), Gaps = 7/110 (6%)
Frame = +2
Query: 167 RRMNRKQKSTG---NVQCSIVKEAWNNKKTSARNLREMGLVSDPNKTIKIPNFKQ----T 325
R++ ++ K G N +C K+ K + E G+ +DP KT I +F + T
Sbjct: 2388 RKVLQRLKDAGVTLNEKCEFSKQ---RMKFLGHVISEDGVEADPEKTKAIQDFPRPTTVT 2444
Query: 326 QIQRAKQMVNQIDSDEEVETVVRLPPKKEVAEKLEKQAKAPRKRKFMLPK 475
++QR MVNQ+ + P ++ +A++ + P++R F K
Sbjct: 2445 ELQRFNGMVNQLAKFIPDLATINEPLRQLLAKEQQWLWDQPQERAFQAIK 2494
>SB_33095| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 833
Score = 31.1 bits (67), Expect = 0.94
Identities = 28/110 (25%), Positives = 51/110 (46%), Gaps = 7/110 (6%)
Frame = +2
Query: 167 RRMNRKQKSTG---NVQCSIVKEAWNNKKTSARNLREMGLVSDPNKTIKIPNFKQ----T 325
R++ ++ K G N +C K+ K + E G+ +DP KT I +F + T
Sbjct: 156 RKVLQRLKDAGVTLNEKCEFSKQ---RMKFLGHVISEDGVEADPEKTKAIQDFPRPTTVT 212
Query: 326 QIQRAKQMVNQIDSDEEVETVVRLPPKKEVAEKLEKQAKAPRKRKFMLPK 475
++QR MVNQ+ + P ++ +A++ + P++R F K
Sbjct: 213 ELQRFNGMVNQLAKFIPDLATINEPLRQLLAKEQQWLWDQPQERAFQAIK 262
>SB_58680| Best HMM Match : Sas10_Utp3 (HMM E-Value=0.13)
Length = 660
Score = 30.7 bits (66), Expect = 1.2
Identities = 24/93 (25%), Positives = 44/93 (47%), Gaps = 6/93 (6%)
Frame = +2
Query: 362 DSDEEVETVVRLPPKKEVAEKLEKQAKAPRKRK----FMLPKGQVEFITYLLDKYGND-- 523
D DE+VE KK++ ++K + K++ F PK EF T ++ K+ D
Sbjct: 354 DEDEQVEISNAKKHKKDLMSSVKKSSSVAAKKELPFTFNAPKNYSEF-TSMISKWKRDDA 412
Query: 524 YKAMERDKKNYYQETWKQLRSKIKTFMGIPAQY 622
+ER K + + + +SK++ F I ++
Sbjct: 413 LTIIERIKACNHPKILPENKSKMEIFFSILLEF 445
>SB_6600| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 245
Score = 30.7 bits (66), Expect = 1.2
Identities = 21/95 (22%), Positives = 49/95 (51%)
Frame = +2
Query: 299 IKIPNFKQTQIQRAKQMVNQIDSDEEVETVVRLPPKKEVAEKLEKQAKAPRKRKFMLPKG 478
+++ K+ + ++ + ++++++EVET + KKEV + EK+ + RK + +G
Sbjct: 25 MEVETEKEVETEKEVETEKEVETEKEVETEKEVETKKEV--ETEKEVEGSRKWR---REG 79
Query: 479 QVEFITYLLDKYGNDYKAMERDKKNYYQETWKQLR 583
+ +K K +E+ +K ++ W+Q R
Sbjct: 80 SGDRERSGGEKEVETEKEVEKRRKWRHRRKWRQRR 114
>SB_22633| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 260
Score = 30.3 bits (65), Expect = 1.6
Identities = 28/99 (28%), Positives = 46/99 (46%), Gaps = 2/99 (2%)
Frame = +2
Query: 179 RKQKSTGNVQCSIVKEAWNNKKTSARNLREMGLVSDPNKTIKIPNFKQTQIQRAKQMVNQ 358
R +K G ++ W +++ R LRE KT+++ I RA + +
Sbjct: 172 RFEKKYGKMEDETQLYEWVDEEEEERKLRERR-----EKTLRL----NAHIWRA-EAERK 221
Query: 359 IDSDEEVETVVRLPPKKEVAEKL--EKQAKAPRKRKFML 469
+ +E E L K+E+ E+L EK+ K +KRKF L
Sbjct: 222 TEEEESAEKEKALRRKQELEERLKREKEKKMMKKRKFSL 260
>SB_49742| Best HMM Match : Dam (HMM E-Value=5.8)
Length = 219
Score = 29.9 bits (64), Expect = 2.2
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +2
Query: 224 EAWNNKKTSARNLREMGLVSDPNKTIKIP 310
E WNN K + R +G + P K++ IP
Sbjct: 75 ECWNNVKETVSLFRRLGFIIHPEKSVFIP 103
>SB_45378| Best HMM Match : DUF843 (HMM E-Value=4.7)
Length = 228
Score = 29.9 bits (64), Expect = 2.2
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +2
Query: 224 EAWNNKKTSARNLREMGLVSDPNKTIKIP 310
E WNN K + R +G + P K++ IP
Sbjct: 98 ECWNNVKETVSLFRRLGFIIHPQKSVFIP 126
>SB_17041| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 668
Score = 29.5 bits (63), Expect = 2.9
Identities = 21/76 (27%), Positives = 39/76 (51%)
Frame = +2
Query: 164 RRRMNRKQKSTGNVQCSIVKEAWNNKKTSARNLREMGLVSDPNKTIKIPNFKQTQIQRAK 343
RR+ ++K+K+ +C+ VK+A NKK + + E S TIK N ++ ++ K
Sbjct: 66 RRKSDKKEKAKDPRECN-VKKATRNKK-AKKEKSEKSHFSFKVNTIKNTNAEKVNKKKRK 123
Query: 344 QMVNQIDSDEEVETVV 391
+ Q S + ++V
Sbjct: 124 DRILQKKSSQPDPSIV 139
>SB_32879| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 126
Score = 29.1 bits (62), Expect = 3.8
Identities = 14/45 (31%), Positives = 25/45 (55%)
Frame = +2
Query: 458 KFMLPKGQVEFITYLLDKYGNDYKAMERDKKNYYQETWKQLRSKI 592
+F++ G F LLD+ +YKA+E+ K E +K+ S++
Sbjct: 70 RFIVTLGNKLFSAKLLDRTTPEYKALEKQVKESVIELYKEAASEL 114
>SB_10355| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0037)
Length = 1127
Score = 29.1 bits (62), Expect = 3.8
Identities = 12/49 (24%), Positives = 25/49 (51%)
Frame = +2
Query: 473 KGQVEFITYLLDKYGNDYKAMERDKKNYYQETWKQLRSKIKTFMGIPAQ 619
K + + L KY DY+ +E+ K ++ E+ + ++S + + AQ
Sbjct: 407 KANINELNSKLSKYEGDYEELEKQYKTHFMESGEHIQSLKEEISKVTAQ 455
>SB_14664| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 61
Score = 29.1 bits (62), Expect = 3.8
Identities = 12/42 (28%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
Frame = +2
Query: 338 AKQMVNQIDSDE-EVETVVRLPPKKEVAEKLEKQAKAPRKRK 460
+K+ +NQ D + + E ++++ KK+ +K++K+ K +K+K
Sbjct: 1 SKREINQKDKKQIKKEEIIKIKKKKKSKKKIKKKKKKKKKKK 42
>SB_29782| Best HMM Match : RnaseH (HMM E-Value=0.15)
Length = 781
Score = 28.7 bits (61), Expect = 5.0
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +2
Query: 224 EAWNNKKTSARNLREMGLVSDPNKTIKIP 310
E WNN K + + +G + P+K++ IP
Sbjct: 327 ECWNNVKETVSLFQRLGFIIHPDKSVFIP 355
>SB_7623| Best HMM Match : SURF6 (HMM E-Value=2.6)
Length = 256
Score = 28.7 bits (61), Expect = 5.0
Identities = 23/97 (23%), Positives = 47/97 (48%), Gaps = 4/97 (4%)
Frame = +2
Query: 317 KQTQIQRAKQMVNQIDSDEEVETVVRLPPKKEVAEKLEKQAKAPRKRKFMLPKGQVEF-- 490
KQ ++R+KQ ++ + +E L ++E+ ++EK+ + KR+ + K ++E
Sbjct: 76 KQRGLERSKQEAQRLLALQEQH----LKEEQEIKNEVEKERQEEEKRRMEIEKQRMESEK 131
Query: 491 --ITYLLDKYGNDYKAMERDKKNYYQETWKQLRSKIK 595
I K + K D + + +E K+L K+K
Sbjct: 132 KRILESKQKRIEESKDTIHDNEKFLEEQRKRLVEKVK 168
>SB_47305| Best HMM Match : I-set (HMM E-Value=0)
Length = 5832
Score = 28.7 bits (61), Expect = 5.0
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = +2
Query: 308 PNFKQTQIQRAKQMVNQIDSDEEVETVVRLPPKKEVA 418
P F + + Q A +V + DS+ E+ VVR PK EVA
Sbjct: 4647 PFFPEDEGQGAVPVVTRQDSEVELGAVVRGSPKPEVA 4683
>SB_30333| Best HMM Match : DUF1168 (HMM E-Value=3.6)
Length = 213
Score = 28.7 bits (61), Expect = 5.0
Identities = 25/101 (24%), Positives = 48/101 (47%), Gaps = 2/101 (1%)
Frame = +2
Query: 161 NRRRMNRKQKSTGNVQCSIVKEAWNNKKTSARNLREMGLVSDPNKTIKIPNFKQTQIQRA 340
N+ + + + ++Q +V + +K ARN + L S + + K T +++A
Sbjct: 69 NQTNIEARSEQATDIQLPVVVK--EKRKDQARNSKPKVLDSLFGPSSRKATGK-TVVEKA 125
Query: 341 KQ--MVNQIDSDEEVETVVRLPPKKEVAEKLEKQAKAPRKR 457
KQ + ++ DS+ +T+V K+V +K KQ R R
Sbjct: 126 KQEKLQSRKDSERPPKTIVPRQDGKQVTDKKGKQRPTRRNR 166
>SB_2434| Best HMM Match : Vicilin_N (HMM E-Value=0.01)
Length = 317
Score = 28.7 bits (61), Expect = 5.0
Identities = 23/97 (23%), Positives = 47/97 (48%), Gaps = 4/97 (4%)
Frame = +2
Query: 317 KQTQIQRAKQMVNQIDSDEEVETVVRLPPKKEVAEKLEKQAKAPRKRKFMLPKGQVEF-- 490
KQ ++R+KQ ++ + +E L ++E+ ++EK+ + KR+ + K ++E
Sbjct: 194 KQRGLERSKQEAQRLLALQEQH----LKEEQEIKNEVEKERQEEEKRRMEIEKQRMESEK 249
Query: 491 --ITYLLDKYGNDYKAMERDKKNYYQETWKQLRSKIK 595
I K + K D + + +E K+L K+K
Sbjct: 250 KRILESKQKRIEESKDTIHDNEKFLEEQRKRLVEKVK 286
>SB_20802| Best HMM Match : Phage_integr_N (HMM E-Value=1.2)
Length = 566
Score = 28.3 bits (60), Expect = 6.6
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = +2
Query: 224 EAWNNKKTSARNLREMGLVSDPNKTIKIP 310
E WNN K + + +G + P K++ IP
Sbjct: 98 ECWNNVKETVSLFQRLGFIIHPEKSVFIP 126
>SB_34371| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 644
Score = 27.9 bits (59), Expect = 8.8
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +2
Query: 263 REMGLVSDPNKTIKIPNFKQTQIQ 334
RE G+ DP+ T K+P + TQ Q
Sbjct: 250 REAGITEDPHGTSKLPRRRSTQTQ 273
>SB_29723| Best HMM Match : EGF_2 (HMM E-Value=0.55)
Length = 319
Score = 27.9 bits (59), Expect = 8.8
Identities = 10/28 (35%), Positives = 19/28 (67%)
Frame = -1
Query: 376 FFI*IDLVYHLFRPLNLSLFEIWYFYSF 293
+F+ + L++H+ + L +S FE + FY F
Sbjct: 9 WFVYVALLWHIVQVLRVSAFESYLFYDF 36
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,117,202
Number of Sequences: 59808
Number of extensions: 317014
Number of successful extensions: 1048
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 988
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1042
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1913853903
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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