Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_F_C02
         (680 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_01_0309 - 2233573-2234556,2234670-2234721,2235406-2236391,223...    31   0.84 

>06_01_0309 -
           2233573-2234556,2234670-2234721,2235406-2236391,
           2237790-2238050
          Length = 760

 Score = 31.1 bits (67), Expect = 0.84
 Identities = 14/42 (33%), Positives = 24/42 (57%)
 Frame = +2

Query: 197 RFRLYYLQTDQGMKQRSFXRASPKSYRTPSTVLIESTICFNS 322
           RF  Y  Q + G++ +S    +   +++PSTV   ST C+N+
Sbjct: 182 RFPQYSTQENAGVQDQSTPLVAANPHKSPSTVSKSSTKCYNT 223


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,327,443
Number of Sequences: 37544
Number of extensions: 277737
Number of successful extensions: 565
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 562
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 565
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1721314888
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)