Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P16_F_C02
(680 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB201717-1|BAD90662.1| 107|Apis mellifera apime-corazonin prepr... 25 0.67
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 24 1.2
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 24 1.5
DQ257415-1|ABB81846.1| 430|Apis mellifera yellow-like protein p... 23 2.0
DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex det... 23 3.6
DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex det... 23 3.6
DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex det... 23 3.6
DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex det... 23 3.6
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 23 3.6
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 23 3.6
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 23 3.6
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 23 3.6
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 23 3.6
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 22 6.2
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 21 8.2
>AB201717-1|BAD90662.1| 107|Apis mellifera apime-corazonin
preprohormone protein.
Length = 107
Score = 25.0 bits (52), Expect = 0.67
Identities = 13/45 (28%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +3
Query: 99 LLVCEAQLTFTPGWGQGKRSEA-TDYRNDGCSSEDSVYTIYKLIK 230
+++C+ T++ GW GKRS + + N D+V+ +L K
Sbjct: 18 IVMCQT-FTYSHGWTNGKRSTSLEELANRNAIQSDNVFANCELQK 61
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 24.2 bits (50), Expect = 1.2
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = +2
Query: 341 ISYVTLSYLYKHILHNYLPMYLSII 415
IS ++ +Y Y + +NY P+Y +II
Sbjct: 315 ISSLSNNYNYNNYNNNYKPLYYNII 339
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 23.8 bits (49), Expect = 1.5
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = -2
Query: 145 WPQPGVNVS*ASQTNKAADQNQHKYQSATH 56
WP +S S T+ +NQ+K Q+ H
Sbjct: 93 WPGDATGLSNRSSTSSNDPKNQYKNQNNNH 122
>DQ257415-1|ABB81846.1| 430|Apis mellifera yellow-like protein
protein.
Length = 430
Score = 23.4 bits (48), Expect = 2.0
Identities = 7/23 (30%), Positives = 14/23 (60%)
Frame = +1
Query: 49 EDNGSRFGTCVDSGPLPCWSAKL 117
++NG +F +D + CW++ L
Sbjct: 323 DENGLQFFNLIDQNAVGCWNSLL 345
>DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 22.6 bits (46), Expect = 3.6
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = +2
Query: 341 ISYVTLSYLYKHILHNYLPMYLSI 412
IS ++ +Y Y + +NY P+Y +I
Sbjct: 82 ISSLSNNYNYNNYNNNYKPLYYNI 105
>DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 22.6 bits (46), Expect = 3.6
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = +2
Query: 341 ISYVTLSYLYKHILHNYLPMYLSI 412
IS ++ +Y Y + +NY P+Y +I
Sbjct: 82 ISSLSNNYNYNNYNNNYKPLYYNI 105
>DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 22.6 bits (46), Expect = 3.6
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = +2
Query: 341 ISYVTLSYLYKHILHNYLPMYLSI 412
IS ++ +Y Y + +NY P+Y +I
Sbjct: 82 ISSLSNNYNYNNYNNNYKPLYYNI 105
>DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 22.6 bits (46), Expect = 3.6
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = +2
Query: 341 ISYVTLSYLYKHILHNYLPMYLSI 412
IS ++ +Y Y + +NY P+Y +I
Sbjct: 82 ISSLSNNYNYNNYNNNYKPLYYNI 105
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.6 bits (46), Expect = 3.6
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = +2
Query: 341 ISYVTLSYLYKHILHNYLPMYLSI 412
IS ++ +Y Y + +NY P+Y +I
Sbjct: 315 ISSLSNNYNYNNYNNNYKPLYYNI 338
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.6 bits (46), Expect = 3.6
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = +2
Query: 341 ISYVTLSYLYKHILHNYLPMYLSI 412
IS ++ +Y Y + +NY P+Y +I
Sbjct: 315 ISSLSNNYNYNNYNNNYKPLYYNI 338
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.6 bits (46), Expect = 3.6
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = +2
Query: 341 ISYVTLSYLYKHILHNYLPMYLSI 412
IS ++ +Y Y + +NY P+Y +I
Sbjct: 315 ISSLSNNYNYNNYNNNYKPLYYNI 338
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 22.6 bits (46), Expect = 3.6
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = +2
Query: 341 ISYVTLSYLYKHILHNYLPMYLSI 412
IS ++ +Y Y + +NY P+Y +I
Sbjct: 304 ISSLSNNYNYNNYNNNYKPLYYNI 327
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 22.6 bits (46), Expect = 3.6
Identities = 8/28 (28%), Positives = 18/28 (64%)
Frame = +3
Query: 480 NYXQNENFQMHHWNNYCLQRIIFENFTL 563
NY N N +++NNY +++ ++N+ +
Sbjct: 321 NYNYNNNNYKYNYNNY-NKKLYYKNYII 347
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 21.8 bits (44), Expect = 6.2
Identities = 11/46 (23%), Positives = 24/46 (52%)
Frame = +3
Query: 315 LIPLSNIVK*VT*LYLIFINIYYTITYLCTYQ*FNIAFIV*MLHRL 452
+IP +++ + YL+F + T++ + T N+ F + HR+
Sbjct: 288 IIPPTSLTVPLLGKYLLFTMVLVTLSVVVTIAVLNVNFRSPVTHRM 333
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 21.4 bits (43), Expect = 8.2
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +3
Query: 264 LNHIEPHRRC 293
LNH P+RRC
Sbjct: 1692 LNHCAPNRRC 1701
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,733
Number of Sequences: 438
Number of extensions: 3507
Number of successful extensions: 19
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20708550
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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