Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_F_B23
         (543 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    25   0.32 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   1.3  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      22   4.0  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      22   4.0  
DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    21   9.2  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    21   9.2  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    21   9.2  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    21   9.2  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    21   9.2  

>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 25.4 bits (53), Expect = 0.32
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = +3

Query: 153 GVNRLYIFLGLVAFTGLYLXFGFGAELICN 242
           GV ++YIF G +  +G+    G+    IC+
Sbjct: 86  GVVQIYIFSGFIVPSGVVYKIGYWLHQICH 115


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.4 bits (48), Expect = 1.3
 Identities = 14/37 (37%), Positives = 16/37 (43%), Gaps = 7/37 (18%)
 Frame = +1

Query: 451  TTGPW*STTVSFVLTTKXTMVVSMI-------WPTQG 540
            TT PW +TT +   TT      S         WPTQG
Sbjct: 1047 TTSPWWTTTTTRRTTTTRPTTTSTTTRPTTTNWPTQG 1083


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.8 bits (44), Expect = 4.0
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = +2

Query: 434 LPAD*IQRVPGDLLPYHSSLLPKXP 508
           LP+D  +  P  L+P H  L P  P
Sbjct: 217 LPSDFYRFSPTGLIPPHPGLSPHPP 241



 Score = 20.6 bits (41), Expect = 9.2
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -1

Query: 480 YGSRSPGTRCIQSAGSTRSRRC 415
           Y + +PGT   QS   +R ++C
Sbjct: 617 YHAVAPGTDIRQSIALSRKKKC 638


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.8 bits (44), Expect = 4.0
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = +2

Query: 434 LPAD*IQRVPGDLLPYHSSLLPKXP 508
           LP+D  +  P  L+P H  L P  P
Sbjct: 109 LPSDFYRFSPTGLIPPHPGLSPHPP 133



 Score = 20.6 bits (41), Expect = 9.2
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -1

Query: 480 YGSRSPGTRCIQSAGSTRSRRC 415
           Y + +PGT   QS   +R ++C
Sbjct: 509 YHAVAPGTDIRQSIALSRKKKC 530


>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 20.6 bits (41), Expect = 9.2
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = +3

Query: 294 PHKDDDTKWLTY 329
           P+K D T W++Y
Sbjct: 305 PYKYDGTNWVSY 316


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 20.6 bits (41), Expect = 9.2
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -3

Query: 418 MHFNSQYNGNQPTMKSEKYS 359
           MHF +QY  NQ      K++
Sbjct: 282 MHFPNQYQMNQEYRTDRKHT 301



 Score = 20.6 bits (41), Expect = 9.2
 Identities = 6/7 (85%), Positives = 6/7 (85%)
 Frame = +3

Query: 54  HPNYNEY 74
           HPNYN Y
Sbjct: 385 HPNYNHY 391


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 20.6 bits (41), Expect = 9.2
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = -3

Query: 397 NGNQPTMKSEKYSTIG 350
           NGN  T  S  Y+TIG
Sbjct: 65  NGNGMTSSSMGYTTIG 80


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 20.6 bits (41), Expect = 9.2
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -3

Query: 418 MHFNSQYNGNQPTMKSEKYS 359
           MHF +QY  NQ      K++
Sbjct: 230 MHFPNQYQMNQEYRTDRKHT 249



 Score = 20.6 bits (41), Expect = 9.2
 Identities = 6/7 (85%), Positives = 6/7 (85%)
 Frame = +3

Query: 54  HPNYNEY 74
           HPNYN Y
Sbjct: 333 HPNYNHY 339


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 20.6 bits (41), Expect = 9.2
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -3

Query: 418 MHFNSQYNGNQPTMKSEKYS 359
           MHF +QY  NQ      K++
Sbjct: 413 MHFPNQYQMNQEYRTDRKHT 432


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,929
Number of Sequences: 336
Number of extensions: 2575
Number of successful extensions: 13
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13306679
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)