Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P16_F_B23
(543 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024201-6|AAF36016.1| 183|Caenorhabditis elegans Hypothetical ... 143 6e-35
Z81113-6|CAD21647.2| 295|Caenorhabditis elegans Hypothetical pr... 111 2e-25
AF045646-11|AAK29829.1| 205|Caenorhabditis elegans Hypothetical... 105 3e-23
U28412-5|AAC46595.1| 229|Caenorhabditis elegans Hypothetical pr... 67 7e-12
AL110490-5|CAB54441.1| 424|Caenorhabditis elegans Hypothetical ... 39 0.002
AF077541-5|AAC64629.1| 380|Caenorhabditis elegans Hypothetical ... 35 0.044
L16559-7|AAA27930.1| 161|Caenorhabditis elegans Hypothetical pr... 31 0.71
U97403-3|AAB52473.1| 142|Caenorhabditis elegans Hypothetical pr... 30 1.2
AC024843-10|AAF60845.2| 526|Caenorhabditis elegans Hypothetical... 30 1.2
Z83128-7|CAB05634.2| 243|Caenorhabditis elegans Hypothetical pr... 29 2.2
Z69794-4|CAA93678.3| 654|Caenorhabditis elegans Hypothetical pr... 29 2.2
AF078157-18|AAG24080.1| 338|Caenorhabditis elegans Seven tm rec... 29 2.2
AL132948-21|CAC51051.2| 453|Caenorhabditis elegans Hypothetical... 29 2.9
Z82051-6|CAB04821.1| 354|Caenorhabditis elegans Hypothetical pr... 28 3.8
U58737-2|AAM69081.1| 479|Caenorhabditis elegans Hypothetical pr... 28 3.8
U58737-1|ABC48238.1| 474|Caenorhabditis elegans Hypothetical pr... 28 3.8
AL132951-1|CAC44310.2| 707|Caenorhabditis elegans Hypothetical ... 28 3.8
U97407-1|AAB52478.2| 411|Caenorhabditis elegans Hypothetical pr... 28 5.0
>AC024201-6|AAF36016.1| 183|Caenorhabditis elegans Hypothetical
protein Y71F9B.3 protein.
Length = 183
Score = 143 bits (347), Expect = 6e-35
Identities = 69/155 (44%), Positives = 94/155 (60%)
Frame = +3
Query: 57 PNYNEYKDXXXQSLNDKSKPWTKYFELAEQXVGVNRLYIFLGLVAFTGLYLXFGFGAELI 236
P + D + L++ S T EQ GV RL++ LG+V LYL FG A+L+
Sbjct: 5 PQVQKVLDDVDKQLHEPSTV-TNVLATVEQKTGVKRLHLVLGVVGLQALYLIFGHSAQLV 63
Query: 237 CNSIGFVYPAYMSXKALESPHKDDDTKWLTYWVVYACFPIVEYFSDFIVGWFPLYWLLKC 416
CN +GFVYPAYMS KA+ES +K+DDT+WLTYWV++A +VE+FS IV FP+YWL K
Sbjct: 64 CNFMGFVYPAYMSIKAIESSNKEDDTQWLTYWVIFAILSVVEFFSVQIVAVFPVYWLFKS 123
Query: 417 IFVIWCYLPTEYNGSLVXXXXXXXXXXQXHHGRID 521
IF+++ YLP+ + G+ H G ID
Sbjct: 124 IFLLYLYLPS-FLGAAKLYHRFVKPVAARHSGSID 157
>Z81113-6|CAD21647.2| 295|Caenorhabditis elegans Hypothetical
protein T03F6.6 protein.
Length = 295
Score = 111 bits (268), Expect = 2e-25
Identities = 47/109 (43%), Positives = 69/109 (63%)
Frame = +3
Query: 141 EQXVGVNRLYIFLGLVAFTGLYLXFGFGAELICNSIGFVYPAYMSXKALESPHKDDDTKW 320
E G+ R + GL+ +Y+ G GAE +CN IG YPAY+S KA+ + DDDT W
Sbjct: 49 EDATGLKREMLAYGLIGLNCVYMIIGSGAEFVCNLIGVAYPAYVSVKAIRTEGTDDDTMW 108
Query: 321 LTYWVVYACFPIVEYFSDFIVGWFPLYWLLKCIFVIWCYLPTEYNGSLV 467
L YW V+ F I+++F+ I+ +FP+YW+ K F+++ YLP E +GS V
Sbjct: 109 LIYWTVFGAFSIIDFFAASIMSYFPIYWVAKAAFLLYLYLP-ETHGSHV 156
>AF045646-11|AAK29829.1| 205|Caenorhabditis elegans Hypothetical
protein F56B3.6 protein.
Length = 205
Score = 105 bits (251), Expect = 3e-23
Identities = 47/100 (47%), Positives = 65/100 (65%)
Frame = +3
Query: 168 YIFLGLVAFTGLYLXFGFGAELICNSIGFVYPAYMSXKALESPHKDDDTKWLTYWVVYAC 347
Y GL+AF +L FG A L+CN IGF YP Y S KA+ SP DDDT WL YW +A
Sbjct: 84 YAAFGLIAF---FLVFGSVARLLCNLIGFGYPTYASVKAIRSPGGDDDTVWLIYWTCFAV 140
Query: 348 FPIVEYFSDFIVGWFPLYWLLKCIFVIWCYLPTEYNGSLV 467
+V++FS+ I+ WFP Y++ K F+++ YLP + GS++
Sbjct: 141 LYLVDFFSEAILSWFPFYYIAKACFLVYLYLP-QTQGSVM 179
>U28412-5|AAC46595.1| 229|Caenorhabditis elegans Hypothetical
protein T19C3.4 protein.
Length = 229
Score = 67.3 bits (157), Expect = 7e-12
Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Frame = +3
Query: 225 AELICNSIGFVYPAYMSXKALESPHKDDDTKWLTYWVVYACFPIVEYFSDFIVG-WFPLY 401
+ L+ + G +YPAY S KA+ + + KW+ YW+V+A + +E D ++ WFP Y
Sbjct: 6 SRLLIITAGTLYPAYRSYKAVRTKDTREYVKWMMYWIVFAIYSFLENLLDLVLAFWFPFY 65
Query: 402 WLLKCIFVIWCYLPTEYNGSLV 467
+ LK +F+ W P S++
Sbjct: 66 FQLKIVFIFWLLSPWTKGASIL 87
>AL110490-5|CAB54441.1| 424|Caenorhabditis elegans Hypothetical
protein Y48B6A.5 protein.
Length = 424
Score = 39.1 bits (87), Expect = 0.002
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Frame = +3
Query: 171 IFLGLVAFTGLYLXFGFGAELICNSIGFVYPAYMSXKALESP--HKDDDTKWLTYWVVYA 344
IF+ + LYL G A+++C ++ V PA S K L +P K+ L YW +Y
Sbjct: 74 IFVMTMISVALYLIEGEHAQVVCTALTSVPPAIFSYKVLMNPKSSKEGYHSILFYWTLYG 133
Query: 345 CFPIVEYF 368
+++ F
Sbjct: 134 ILAVIDQF 141
>AF077541-5|AAC64629.1| 380|Caenorhabditis elegans Hypothetical
protein Y23H5A.4 protein.
Length = 380
Score = 34.7 bits (76), Expect = 0.044
Identities = 29/94 (30%), Positives = 39/94 (41%), Gaps = 2/94 (2%)
Frame = +3
Query: 141 EQXVGVNRLYIFLGLVAFTGLYLXFGFGAELICNSIGFVYPAYMSXKALESPHKDDD--T 314
E VG L I L LYL G A+ IC ++ V PA S + L + D
Sbjct: 52 EGLVGTKELVILSALTMC--LYLINGEYAQTICTALTSVPPALFSYRVLTNQMTDKQGYH 109
Query: 315 KWLTYWVVYACFPIVEYFSDFIVGWFPLYWLLKC 416
L YW +Y +++ F+ G Y L KC
Sbjct: 110 SILFYWTLYGLTALIDQFAGTAQG----YNLCKC 139
>L16559-7|AAA27930.1| 161|Caenorhabditis elegans Hypothetical
protein C06E1.1 protein.
Length = 161
Score = 30.7 bits (66), Expect = 0.71
Identities = 21/81 (25%), Positives = 32/81 (39%)
Frame = +3
Query: 123 KYFELAEQXVGVNRLYIFLGLVAFTGLYLXFGFGAELICNSIGFVYPAYMSXKALESPHK 302
K F AE+ G+ R I +Y+ G L + I +P S L K
Sbjct: 27 KTFTQAEKFSGIPRERIVSMAFLMLSIYVLLGNFLPLFSHIICIFWPVKESFMILRQ-QK 85
Query: 303 DDDTKWLTYWVVYACFPIVEY 365
+ L YW++YA + +Y
Sbjct: 86 NPSDNILLYWILYAMVSLFDY 106
>U97403-3|AAB52473.1| 142|Caenorhabditis elegans Hypothetical
protein T10E9.6 protein.
Length = 142
Score = 29.9 bits (64), Expect = 1.2
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +3
Query: 327 YWVVYACFPIVEYFSDFIVGWFPLYWLLKCIFVIWCYLP 443
YW ++ F Y D I+ + PLY+++K I +LP
Sbjct: 91 YWTIFGFF----YLFDRILEYIPLYYIIKLAVFIGLFLP 125
>AC024843-10|AAF60845.2| 526|Caenorhabditis elegans Hypothetical
protein Y61A9LA.1 protein.
Length = 526
Score = 29.9 bits (64), Expect = 1.2
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +3
Query: 306 DDTKWLTYWVVYACFPIVEYFSDFIVGW 389
D T L + ++ CFPI F F+ GW
Sbjct: 85 DSTLHLLWSLLNVCFPIATIFGQFLAGW 112
>Z83128-7|CAB05634.2| 243|Caenorhabditis elegans Hypothetical
protein W01D2.3 protein.
Length = 243
Score = 29.1 bits (62), Expect = 2.2
Identities = 25/110 (22%), Positives = 41/110 (37%), Gaps = 8/110 (7%)
Frame = +3
Query: 129 FELAEQXVGVNRLYIFLGLVAFTGLYLXFGFGAELICNSIGFVYPAYMSXKALESPHKDD 308
F E+ G R + F G + + I + + P +M+ A+ S +
Sbjct: 88 FREIERVFGRRREHCFYGALGVLLTLVLLNDAVGAITAFMTLIIPTFMTVTAISSTSSYE 147
Query: 309 DTKWLT--------YWVVYACFPIVEYFSDFIVGWFPLYWLLKCIFVIWC 434
+ +L YW VYA F E F ++ W L + IF+ C
Sbjct: 148 NPSFLKNHQDFFVRYWTVYAVFVTGESFLSSLIHWD--LRLFRLIFMSMC 195
>Z69794-4|CAA93678.3| 654|Caenorhabditis elegans Hypothetical
protein R03G8.3 protein.
Length = 654
Score = 29.1 bits (62), Expect = 2.2
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -3
Query: 382 TMKSEKYSTIGKQAYTTQYVSHFVSSSLCGDSRAXI 275
T KSE+Y+ IG YT ++ V ++C D + +
Sbjct: 129 TRKSERYNVIGNWTYTPGPINCEVVEAVCADGKKDV 164
>AF078157-18|AAG24080.1| 338|Caenorhabditis elegans Seven tm
receptor protein 28 protein.
Length = 338
Score = 29.1 bits (62), Expect = 2.2
Identities = 12/38 (31%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = +3
Query: 330 WVVYACFPIVEYFSDFIVGWFPLYWLLKCIFV--IWCY 437
++ AC +S GW +YWLL C+ + +W Y
Sbjct: 110 FIYRACVLARPIWSKIFDGWKLIYWLLYCLIIGGLWSY 147
>AL132948-21|CAC51051.2| 453|Caenorhabditis elegans Hypothetical
protein Y39B6A.29 protein.
Length = 453
Score = 28.7 bits (61), Expect = 2.9
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +1
Query: 283 LWSHRTRMTIQNGLHIGWC 339
L SH TR TI++ ++I WC
Sbjct: 129 LTSHSTRKTIESNINIAWC 147
>Z82051-6|CAB04821.1| 354|Caenorhabditis elegans Hypothetical
protein T23D5.9 protein.
Length = 354
Score = 28.3 bits (60), Expect = 3.8
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +3
Query: 348 FPIVEYFSDFIVGWFPLYWLLKCIFVI 428
FPI+ Y +D V W +Y+L+ +F+I
Sbjct: 182 FPIIPYAADGSVRWNNIYFLIIGVFII 208
>U58737-2|AAM69081.1| 479|Caenorhabditis elegans Hypothetical
protein ZK54.1a protein.
Length = 479
Score = 28.3 bits (60), Expect = 3.8
Identities = 10/37 (27%), Positives = 17/37 (45%)
Frame = +3
Query: 324 TYWVVYACFPIVEYFSDFIVGWFPLYWLLKCIFVIWC 434
+Y+ P+ Y + GW ++W + VIWC
Sbjct: 191 SYFGTVVAMPLSAYLGEHF-GWPMIFWFFGALGVIWC 226
>U58737-1|ABC48238.1| 474|Caenorhabditis elegans Hypothetical
protein ZK54.1b protein.
Length = 474
Score = 28.3 bits (60), Expect = 3.8
Identities = 10/37 (27%), Positives = 17/37 (45%)
Frame = +3
Query: 324 TYWVVYACFPIVEYFSDFIVGWFPLYWLLKCIFVIWC 434
+Y+ P+ Y + GW ++W + VIWC
Sbjct: 186 SYFGTVVAMPLSAYLGEHF-GWPMIFWFFGALGVIWC 221
>AL132951-1|CAC44310.2| 707|Caenorhabditis elegans Hypothetical
protein Y67H2A.1 protein.
Length = 707
Score = 28.3 bits (60), Expect = 3.8
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -3
Query: 292 DSRAXIDMYAGYTKPIELHINSAPXPNXKYKPVNATKPK 176
DS DMYA LH + P P+ KY P N++ P+
Sbjct: 581 DSNPVYDMYADSVVAAILHAQANPVPD-KYLPSNSSFPQ 618
>U97407-1|AAB52478.2| 411|Caenorhabditis elegans Hypothetical
protein C34G6.5 protein.
Length = 411
Score = 27.9 bits (59), Expect = 5.0
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = -1
Query: 237 ILIQLRXRTXNINR*TRPSLRKCTICSRRPXVRLVQNISSMACFCRSDF 91
+++ LR ++ R S + CTIC +R N S CFCR ++
Sbjct: 305 LILCLRFGFDHVRRHCSSSRQPCTICQKRSF-----NNSMGVCFCRKNY 348
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,231,674
Number of Sequences: 27780
Number of extensions: 251713
Number of successful extensions: 715
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 690
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 714
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1091917214
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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