Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_F_B18
         (760 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    24   1.5  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    23   2.0  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    22   6.1  

>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 8/31 (25%), Positives = 16/31 (51%)
 Frame = -1

Query: 445 CINTLSSVSPKNCNYFIQYIISYCHLLWVIV 353
           C+ T  SV    C + ++Y  +Y H  + ++
Sbjct: 136 CVQTEKSVFDFLCRHTVEYFQNYIHFFYQLL 166


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 14/42 (33%), Positives = 20/42 (47%)
 Frame = -1

Query: 493 ILTILPSKHIL*LKNWCINTLSSVSPKNCNYFIQYIISYCHL 368
           I++    +HIL + N C    S V  K   YF+    +Y HL
Sbjct: 319 IMSAAAVEHILSIVNTCSQIPSEVEDKYTTYFLN---TYPHL 357


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = -1

Query: 751 CYYLQAXCIRYHRIIYTSYVKVALIKF 671
           C+ LQ   I +  +IYT+Y    L+ F
Sbjct: 229 CFGLQILGILFVGVIYTTYTIFLLLIF 255


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,522
Number of Sequences: 336
Number of extensions: 3663
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20338724
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)