Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P16_F_B18
(760 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69384-1|CAA93416.1| 520|Caenorhabditis elegans Hypothetical pr... 247 6e-66
Z69384-2|CAD89746.1| 521|Caenorhabditis elegans Hypothetical pr... 241 4e-64
S68230-1|AAD14008.1| 514|Caenorhabditis elegans histidyl tRNA s... 220 1e-57
L13152-1|AAB38116.1| 525|Caenorhabditis elegans histidyl tRNA s... 220 1e-57
Z75714-3|CAB00060.1| 1149|Caenorhabditis elegans Hypothetical pr... 36 0.041
U00037-4|AAU20840.1| 454|Caenorhabditis elegans Prolyl trna syn... 35 0.072
U00037-3|AAA50660.1| 581|Caenorhabditis elegans Prolyl trna syn... 35 0.072
AC024798-12|AAK29920.2| 1725|Caenorhabditis elegans Hypothetical... 32 0.38
AL034543-2|CAA22515.1| 1696|Caenorhabditis elegans Hypothetical ... 31 0.67
AL132898-1|CAC14405.1| 357|Caenorhabditis elegans Hypothetical ... 31 0.89
Z81015-6|CAE17725.1| 209|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z81525-1|CAB04256.1| 897|Caenorhabditis elegans Hypothetical pr... 30 1.6
U19615-1|AAB51351.1| 897|Caenorhabditis elegans Nucampholin pro... 30 1.6
AC024781-1|AAN39662.2| 367|Caenorhabditis elegans Hypothetical ... 30 1.6
Z70271-4|CAA94235.1| 1026|Caenorhabditis elegans Hypothetical pr... 28 6.3
>Z69384-1|CAA93416.1| 520|Caenorhabditis elegans Hypothetical
protein T11G6.1a protein.
Length = 520
Score = 247 bits (605), Expect = 6e-66
Identities = 122/204 (59%), Positives = 149/204 (73%), Gaps = 4/204 (1%)
Frame = +2
Query: 161 ADPQGHLLLKIQEQGDLVRKLKAAKESNERVKEEVSKLLALKAQLVTEDAGPQK---FTL 331
A+ + L+ + Q GD +R+LK K +KE+V+ L+ K + E P+K F L
Sbjct: 3 AERKAILMQEAQALGDEIRQLKLDKADQAIIKEKVA-LMQAKRKEAGETGAPEKPGKFVL 61
Query: 332 KTPKGTRDYNPQQMTIRNNVLDKIITVFRRHGAECIDTPVFELKDVLTGKYGEDS-KLIY 508
KT KGTRDY P Q +RN+VL + F R+GAE IDTPVFEL+DVL GKYGE+ KL+Y
Sbjct: 62 KTGKGTRDYGPAQSALRNSVLQTVTETFNRYGAETIDTPVFELRDVLMGKYGEEGGKLVY 121
Query: 509 DLKDQGGEILSLRYDLTVPLARYLAMNKITTLKRYHIAKVYRRDNPAMTRGRYREFYQCD 688
DL+DQGGE+LSLRYDLTVP ARYLAMNKIT + RY IAKVYRRD P M+RGRYREFYQCD
Sbjct: 122 DLQDQGGELLSLRYDLTVPFARYLAMNKITNITRYQIAKVYRRDQPVMSRGRYREFYQCD 181
Query: 689 FDIAGVYDPMVPDAXCLKVVTEIL 760
FDIAG YD M+P+A CL +V E+L
Sbjct: 182 FDIAGQYDLMLPEAECLGIVDELL 205
>Z69384-2|CAD89746.1| 521|Caenorhabditis elegans Hypothetical
protein T11G6.1b protein.
Length = 521
Score = 241 bits (590), Expect = 4e-64
Identities = 118/199 (59%), Positives = 147/199 (73%), Gaps = 5/199 (2%)
Frame = +2
Query: 179 LLLKIQEQGDLVR-KLKAAKESNERVKEEVSKLLALKAQLVTEDAGPQK---FTLKTPKG 346
L +++ + V+ ++ A+ S R+KE+V+ L+ K + E P+K F LKT KG
Sbjct: 9 LAFSVRQAEETVKPRIAYAQRSGRRIKEKVA-LMQAKRKEAGETGAPEKPGKFVLKTGKG 67
Query: 347 TRDYNPQQMTIRNNVLDKIITVFRRHGAECIDTPVFELKDVLTGKYGEDS-KLIYDLKDQ 523
TRDY P Q +RN+VL + F R+GAE IDTPVFEL+DVL GKYGE+ KL+YDL+DQ
Sbjct: 68 TRDYGPAQSALRNSVLQTVTETFNRYGAETIDTPVFELRDVLMGKYGEEGGKLVYDLQDQ 127
Query: 524 GGEILSLRYDLTVPLARYLAMNKITTLKRYHIAKVYRRDNPAMTRGRYREFYQCDFDIAG 703
GGE+LSLRYDLTVP ARYLAMNKIT + RY IAKVYRRD P M+RGRYREFYQCDFDIAG
Sbjct: 128 GGELLSLRYDLTVPFARYLAMNKITNITRYQIAKVYRRDQPVMSRGRYREFYQCDFDIAG 187
Query: 704 VYDPMVPDAXCLKVVTEIL 760
YD M+P+A CL +V E+L
Sbjct: 188 QYDLMLPEAECLGIVDELL 206
>S68230-1|AAD14008.1| 514|Caenorhabditis elegans histidyl tRNA
synthetase protein.
Length = 514
Score = 220 bits (537), Expect = 1e-57
Identities = 101/139 (72%), Positives = 114/139 (82%), Gaps = 1/139 (0%)
Frame = +2
Query: 314 PQKFTLKTPKGTRDYNPQQMTIRNNVLDKIITVFRRHGAECIDTPVFELKDVLTGKYGED 493
P KF LKT KGTRDY P Q +RN+VL + F R+GAE IDTPVFEL+DVL GKYGE+
Sbjct: 6 PGKFVLKTGKGTRDYGPAQSALRNSVLQTVTETFNRYGAETIDTPVFELRDVLMGKYGEE 65
Query: 494 S-KLIYDLKDQGGEILSLRYDLTVPLARYLAMNKITTLKRYHIAKVYRRDNPAMTRGRYR 670
KL+YDL+DQGGE+LSLRYDLTVP ARYLAMNKIT + RY IAKVYRRD P M+RGRYR
Sbjct: 66 GGKLVYDLQDQGGELLSLRYDLTVPFARYLAMNKITNITRYQIAKVYRRDQPVMSRGRYR 125
Query: 671 EFYQCDFDIAGVYDPMVPD 727
EFYQCDFDIAG YD M+P+
Sbjct: 126 EFYQCDFDIAGQYDLMLPE 144
>L13152-1|AAB38116.1| 525|Caenorhabditis elegans histidyl tRNA
synthetase protein.
Length = 525
Score = 220 bits (537), Expect = 1e-57
Identities = 101/139 (72%), Positives = 114/139 (82%), Gaps = 1/139 (0%)
Frame = +2
Query: 314 PQKFTLKTPKGTRDYNPQQMTIRNNVLDKIITVFRRHGAECIDTPVFELKDVLTGKYGED 493
P KF LKT KGTRDY P Q +RN+VL + F R+GAE IDTPVFEL+DVL GKYGE+
Sbjct: 17 PGKFVLKTGKGTRDYGPAQSALRNSVLQTVTETFNRYGAETIDTPVFELRDVLMGKYGEE 76
Query: 494 S-KLIYDLKDQGGEILSLRYDLTVPLARYLAMNKITTLKRYHIAKVYRRDNPAMTRGRYR 670
KL+YDL+DQGGE+LSLRYDLTVP ARYLAMNKIT + RY IAKVYRRD P M+RGRYR
Sbjct: 77 GGKLVYDLQDQGGELLSLRYDLTVPFARYLAMNKITNITRYQIAKVYRRDQPVMSRGRYR 136
Query: 671 EFYQCDFDIAGVYDPMVPD 727
EFYQCDFDIAG YD M+P+
Sbjct: 137 EFYQCDFDIAGQYDLMLPE 155
>Z75714-3|CAB00060.1| 1149|Caenorhabditis elegans Hypothetical
protein ZC434.5 protein.
Length = 1149
Score = 35.5 bits (78), Expect = 0.041
Identities = 16/35 (45%), Positives = 24/35 (68%)
Frame = +2
Query: 188 KIQEQGDLVRKLKAAKESNERVKEEVSKLLALKAQ 292
+I+ QG LVR+LK ++ K+ ++KLLALK Q
Sbjct: 881 QIESQGALVRELKGKDAKSQATKDAIAKLLALKKQ 915
Score = 32.7 bits (71), Expect = 0.29
Identities = 16/37 (43%), Positives = 25/37 (67%)
Frame = +2
Query: 179 LLLKIQEQGDLVRKLKAAKESNERVKEEVSKLLALKA 289
LL +I+EQG +VR K+ ++ + ++KLLALKA
Sbjct: 1089 LLKEIEEQGAVVRDAKSKDPKSQDSADAINKLLALKA 1125
Score = 31.9 bits (69), Expect = 0.51
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = +2
Query: 191 IQEQGDLVRKLKAAKESNERVKEEVSKLLALKAQ 292
I+ QG LVR+LK ++ K+ ++KLL LK Q
Sbjct: 808 IEAQGLLVRELKGKDAKSQATKDAIAKLLELKKQ 841
Score = 30.7 bits (66), Expect = 1.2
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +2
Query: 191 IQEQGDLVRKLKAAKESNERVKEEVSKLLALK 286
I++QG +VR LK ++ K+ ++KLL LK
Sbjct: 737 IEQQGGIVRDLKTKDAKSQATKDAIAKLLDLK 768
Score = 30.3 bits (65), Expect = 1.6
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +2
Query: 188 KIQEQGDLVRKLKAAKESNERVKEEVSKLLALK 286
+I+ QG LVR LK ++ K+ ++KLL LK
Sbjct: 948 QIEAQGVLVRDLKNKDSKSQETKDAIAKLLELK 980
Score = 30.3 bits (65), Expect = 1.6
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +2
Query: 188 KIQEQGDLVRKLKAAKESNERVKEEVSKLLALKAQ 292
+I +Q LVR+LK ++ K+ ++KLL LK Q
Sbjct: 1020 QIDDQALLVRELKMKDAKSQETKDAIAKLLQLKKQ 1054
>U00037-4|AAU20840.1| 454|Caenorhabditis elegans Prolyl trna
synthetase protein1, isoform b protein.
Length = 454
Score = 34.7 bits (76), Expect = 0.072
Identities = 18/34 (52%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Frame = +2
Query: 188 KIQEQGDLVRKLKAAKESNERVKEE-VSKLLALK 286
+I+EQG VR++K K S E K+E + KLLALK
Sbjct: 10 EIEEQGAEVRRVKGDKNSTEEAKKEAIDKLLALK 43
>U00037-3|AAA50660.1| 581|Caenorhabditis elegans Prolyl trna
synthetase protein1, isoform a protein.
Length = 581
Score = 34.7 bits (76), Expect = 0.072
Identities = 18/34 (52%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Frame = +2
Query: 188 KIQEQGDLVRKLKAAKESNERVKEE-VSKLLALK 286
+I+EQG VR++K K S E K+E + KLLALK
Sbjct: 10 EIEEQGAEVRRVKGDKNSTEEAKKEAIDKLLALK 43
>AC024798-12|AAK29920.2| 1725|Caenorhabditis elegans Hypothetical
protein Y48G9A.1 protein.
Length = 1725
Score = 32.3 bits (70), Expect = 0.38
Identities = 20/78 (25%), Positives = 36/78 (46%)
Frame = +2
Query: 206 DLVRKLKAAKESNERVKEEVSKLLALKAQLVTEDAGPQKFTLKTPKGTRDYNPQQMTIRN 385
D+ R + A + ++R + + + L L A L ++ Q + P G D + RN
Sbjct: 282 DVGRLQREAIDESDR-RSGIGQTLVLLAGLCRQEEAEQLIRIVAPDGLSD---RAQECRN 337
Query: 386 NVLDKIITVFRRHGAECI 439
+ + + RRHGA C+
Sbjct: 338 ELRNAAVETIRRHGAACM 355
>AL034543-2|CAA22515.1| 1696|Caenorhabditis elegans Hypothetical
protein Y81G3A.3 protein.
Length = 1696
Score = 31.5 bits (68), Expect = 0.67
Identities = 16/65 (24%), Positives = 31/65 (47%)
Frame = +2
Query: 509 DLKDQGGEILSLRYDLTVPLARYLAMNKITTLKRYHIAKVYRRDNPAMTRGRYREFYQCD 688
++ D+ G ++L DL R+ N + +KR++ +VY + + G E ++C
Sbjct: 1105 EVLDRSGVPVALPMDLRQNFVRFCVRNSVQRMKRFNFGRVYSQTS---ANGHPHERWECC 1161
Query: 689 FDIAG 703
D G
Sbjct: 1162 VDCIG 1166
>AL132898-1|CAC14405.1| 357|Caenorhabditis elegans Hypothetical
protein Y59A8B.2 protein.
Length = 357
Score = 31.1 bits (67), Expect = 0.89
Identities = 15/47 (31%), Positives = 26/47 (55%)
Frame = -3
Query: 662 FL*SWQDCLFCTPSLYDISLK*LFYSLLNTEPKVQSNHILMKEFLHL 522
F+ + CLF TP L ++ K +F S +NT+ ++ S ++ F L
Sbjct: 34 FMSATLQCLFQTPGLAEVFTKKVFVSKVNTQSRLGSKGVISAGFASL 80
>Z81015-6|CAE17725.1| 209|Caenorhabditis elegans Hypothetical
protein C11E4.8 protein.
Length = 209
Score = 30.7 bits (66), Expect = 1.2
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = -1
Query: 385 ISYCHLLWVIVSCSLWCFKS 326
I+YC ++W++ CS W +S
Sbjct: 42 IAYCEIMWIVSQCSFWTAES 61
>Z81525-1|CAB04256.1| 897|Caenorhabditis elegans Hypothetical
protein F33A8.1 protein.
Length = 897
Score = 30.3 bits (65), Expect = 1.6
Identities = 23/75 (30%), Positives = 33/75 (44%)
Frame = +2
Query: 197 EQGDLVRKLKAAKESNERVKEEVSKLLALKAQLVTEDAGPQKFTLKTPKGTRDYNPQQMT 376
E G V KL E NE V EE+ K + A + ED G + + + +
Sbjct: 415 ENGLNVFKLDPEFEKNEEVYEEIRKEIIGNADISDEDGGDELDDEEEGSDVEEAPKKTTE 474
Query: 377 IRNNVLDKIITVFRR 421
I +N D+ +T FRR
Sbjct: 475 IIDNT-DQNLTAFRR 488
>U19615-1|AAB51351.1| 897|Caenorhabditis elegans Nucampholin
protein.
Length = 897
Score = 30.3 bits (65), Expect = 1.6
Identities = 23/75 (30%), Positives = 33/75 (44%)
Frame = +2
Query: 197 EQGDLVRKLKAAKESNERVKEEVSKLLALKAQLVTEDAGPQKFTLKTPKGTRDYNPQQMT 376
E G V KL E NE V EE+ K + A + ED G + + + +
Sbjct: 415 ENGLNVFKLDPEFEKNEEVYEEIRKEIIGNADISDEDGGDELDDEEEGSDVEEAPKKTTE 474
Query: 377 IRNNVLDKIITVFRR 421
I +N D+ +T FRR
Sbjct: 475 IIDNT-DQNLTAFRR 488
>AC024781-1|AAN39662.2| 367|Caenorhabditis elegans Hypothetical
protein Y43H11AL.1 protein.
Length = 367
Score = 30.3 bits (65), Expect = 1.6
Identities = 31/98 (31%), Positives = 44/98 (44%), Gaps = 2/98 (2%)
Frame = +2
Query: 440 DTPVFELKDVLTGKYGEDSKL-IYDLKDQGGEILSLRYDLTVPLARYLAMNKITTLKRYH 616
DT E + V G+ D K I +L ++ +L+ R TV A Y +N++ YH
Sbjct: 52 DTQKSEKERVEAGRKLADLKCRIRELAEKK-TLLAERNHRTVQ-AVYTKLNELA----YH 105
Query: 617 IAKVYRRDNPAMTRGRYREFYQ-CDFDIAGVYDPMVPD 727
DNP T R R FYQ D + G Y +P+
Sbjct: 106 CKCELETDNPGSTEQRERVFYQTLDKNYRGEYQSSIPN 143
>Z70271-4|CAA94235.1| 1026|Caenorhabditis elegans Hypothetical
protein W08D2.7 protein.
Length = 1026
Score = 28.3 bits (60), Expect = 6.3
Identities = 51/199 (25%), Positives = 83/199 (41%), Gaps = 16/199 (8%)
Frame = +2
Query: 212 VRKLKAAKESNERVKEEVSKLLALKAQLVTEDAGPQKFTLKTPKGTR---DYNPQQMTIR 382
+ KL +AK+ R E+++ LLA + D G F T K R + ++ +
Sbjct: 28 MEKLDSAKKRQAR--EDMTNLLAN----MHNDVGVGNFDEATSKRARVEEEEEVEEARME 81
Query: 383 NNVLDKIITVFRRHGAECIDTPVFELKDVLTGKYGEDSKLIYDLKD--QGGEILSLRYDL 556
N ++ I T E P E ++ E +K D Q IL + +
Sbjct: 82 NIIVHTIRTDNENCTHEVAIPPNAEFAELRENSGTEPAKYYPFQLDAFQKQAILCIDNNQ 141
Query: 557 TVPLARYLAMNKITTLKRYHIAK--------VYRRDNPAMTRGRYREFYQCDFDIAGVYD 712
+V ++ + + K T + Y IAK +Y A++ +YRE + +F G+
Sbjct: 142 SVLVSAHTSAGK-TVVATYAIAKCLREKQRVIYTSPIKALSNQKYRELEE-EFKDVGLMT 199
Query: 713 PMV---PDAXCLKVVTEIL 760
V PDA CL + TEIL
Sbjct: 200 GDVTLNPDASCLVMTTEIL 218
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,453,204
Number of Sequences: 27780
Number of extensions: 335013
Number of successful extensions: 944
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 898
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 940
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1809061256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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