Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P16_F_B14
(779 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_58559| Best HMM Match : AA_permease (HMM E-Value=1.5e-07) 180 1e-45
SB_32481| Best HMM Match : No HMM Matches (HMM E-Value=.) 179 2e-45
SB_43214| Best HMM Match : No HMM Matches (HMM E-Value=.) 178 4e-45
SB_24308| Best HMM Match : No HMM Matches (HMM E-Value=.) 175 3e-44
SB_47706| Best HMM Match : No HMM Matches (HMM E-Value=.) 154 9e-38
SB_24307| Best HMM Match : No HMM Matches (HMM E-Value=.) 145 3e-35
SB_28982| Best HMM Match : No HMM Matches (HMM E-Value=.) 142 4e-34
SB_51333| Best HMM Match : Yip1 (HMM E-Value=2.7) 104 7e-23
SB_27096| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 1e-07
SB_52606| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 2e-07
SB_18408| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 5e-06
SB_35680| Best HMM Match : Sushi (HMM E-Value=4.4e-22) 38 0.012
SB_8425| Best HMM Match : EGF (HMM E-Value=0) 38 0.012
SB_44981| Best HMM Match : AA_permease (HMM E-Value=9.6e-13) 36 0.049
SB_11966| Best HMM Match : adh_short (HMM E-Value=4.1e-32) 36 0.049
SB_59534| Best HMM Match : AA_permease (HMM E-Value=3.1e-05) 34 0.15
SB_23660| Best HMM Match : AA_permease (HMM E-Value=1.3e-18) 32 0.45
SB_5139| Best HMM Match : WD40 (HMM E-Value=8.5e-27) 32 0.60
SB_25012| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.4
SB_22151| Best HMM Match : MORN (HMM E-Value=6) 31 1.4
SB_2181| Best HMM Match : RGS (HMM E-Value=0.11) 31 1.4
SB_30749| Best HMM Match : FARP (HMM E-Value=0.032) 30 1.8
SB_34168| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_53813| Best HMM Match : RA (HMM E-Value=1.1) 29 3.2
SB_30249| Best HMM Match : Extensin_2 (HMM E-Value=0.035) 29 3.2
SB_41173| Best HMM Match : Sas10_Utp3 (HMM E-Value=2.8) 29 4.2
SB_19847| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2
SB_18414| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.6
SB_58829| Best HMM Match : HC2 (HMM E-Value=5.8) 28 7.4
SB_57119| Best HMM Match : Ribosomal_L7Ae (HMM E-Value=1.4e-20) 28 7.4
SB_50981| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.4
SB_3481| Best HMM Match : Viral_helicase1 (HMM E-Value=1.1) 28 7.4
SB_28951| Best HMM Match : DUF81 (HMM E-Value=8.5) 28 7.4
SB_22348| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.4
SB_24802| Best HMM Match : Phage_fiber_C (HMM E-Value=1.1) 28 9.8
>SB_58559| Best HMM Match : AA_permease (HMM E-Value=1.5e-07)
Length = 530
Score = 180 bits (438), Expect = 1e-45
Identities = 82/206 (39%), Positives = 127/206 (61%)
Frame = +1
Query: 160 DDGNSNPGDKLEGSDAAPDDPVHLKRRVGLFSGVALIVGTMIGSGIFVSPSGLLARTGSV 339
D+G+S+ GS + + LK+ + + +G+ +I GT+IGSGIF+SP+G+ GS+
Sbjct: 82 DEGSSSSS----GSTDSERGKITLKKNITMVNGIGIIAGTVIGSGIFISPTGIQKEAGSI 137
Query: 340 GISFIIWMACXXXXXXXXXXXXXXXTMNTSSGAEYAYFMDAFGGPPAFLFSWVSTLVLKP 519
G++ +IW+ C + T SGAEYAY M+AFG PA+LF+W S L+++P
Sbjct: 138 GLALLIWLGCGILAMLGCLCYAELGALVTKSGAEYAYLMEAFGRIPAYLFAWTSILIIRP 197
Query: 520 SQMAIICLSFAKYAVEPFVAECEPPDSLVKLVAVISIVMILXVNCYSVNLATNVQNIFTA 699
+ AII L F +Y +PF +C PP +VK++A + +V++ VNC+SV AT VQ++FT
Sbjct: 198 ASGAIIALIFGEYVAKPFFPDCPPPPEVVKILACVCLVVVTGVNCWSVKWATRVQDVFTY 257
Query: 700 AKLVAIAIIVCGGAYKLILXNTRHLQ 777
AKL+ IA++ G +L T H Q
Sbjct: 258 AKLLCIAMLTITGIVELCRGKTEHFQ 283
>SB_32481| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 499
Score = 179 bits (436), Expect = 2e-45
Identities = 85/185 (45%), Positives = 118/185 (63%)
Frame = +1
Query: 223 VHLKRRVGLFSGVALIVGTMIGSGIFVSPSGLLARTGSVGISFIIWMACXXXXXXXXXXX 402
V L++RV L SG++ IVGT+IGSGIF+SP+G+L T S+G+S ++W C
Sbjct: 36 VGLEKRVTLLSGISFIVGTVIGSGIFISPTGILGTTQSIGLSLMVWFGCGFLALLACLCY 95
Query: 403 XXXXTMNTSSGAEYAYFMDAFGGPPAFLFSWVSTLVLKPSQMAIICLSFAKYAVEPFVAE 582
T SGAEYAY M+AFG PAFLF+W ++ +P+ AI+ L FA+Y +PF E
Sbjct: 96 TELGTAVQKSGAEYAYLMEAFGPIPAFLFAWTGIIINRPAITAIVSLIFAEYVAKPFFPE 155
Query: 583 CEPPDSLVKLVAVISIVMILXVNCYSVNLATNVQNIFTAAKLVAIAIIVCGGAYKLILXN 762
C PP ++VKL+ + IV + +NC+SV AT VQ IFT AKL+ IA++V G +L
Sbjct: 156 CAPPPAVVKLLGLACIVTVTGINCWSVRWATRVQRIFTYAKLLCIAMLVIIGVVELCKGK 215
Query: 763 TRHLQ 777
T +LQ
Sbjct: 216 TENLQ 220
>SB_43214| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 424
Score = 178 bits (434), Expect = 4e-45
Identities = 86/185 (46%), Positives = 117/185 (63%), Gaps = 3/185 (1%)
Frame = +1
Query: 193 EGSDAAPDD--PVHLKRRVGLFSGVALIVGTMIGSGIFVSPSGLLARTGSVGISFIIWMA 366
E D P + +HLK+ V L +GVAL+VG MIGSGIF+SP G+L +TGSVG+S ++W
Sbjct: 21 ENGDIPPVEIKEIHLKKEVSLINGVALVVGVMIGSGIFISPKGVLQQTGSVGLSLVVWAG 80
Query: 367 CXXXXXXXXXXXXXXXTMNTSSGAEYAYFMDAFGGPPAFLFSWVSTLVLKPSQMAIICLS 546
C TM SGAEY+Y DAFG PAFL+SW L+++PS +AI+ L+
Sbjct: 81 CGLLALFGSLCYCEMGTMIPKSGAEYSYLKDAFGPLPAFLYSWTLALIIRPSSLAIVSLT 140
Query: 547 FAKYAVEPFVAECE-PPDSLVKLVAVISIVMILXVNCYSVNLATNVQNIFTAAKLVAIAI 723
FA+Y +PF CE P S+ K++A + + L +NC SV AT +Q+ FT KL+AIAI
Sbjct: 141 FARYVTQPFFPNCEISPLSVRKILAACCLALTLFINCASVRWATRIQDSFTLGKLIAIAI 200
Query: 724 IVCGG 738
+V G
Sbjct: 201 LVILG 205
>SB_24308| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 740
Score = 175 bits (427), Expect = 3e-44
Identities = 96/201 (47%), Positives = 120/201 (59%), Gaps = 7/201 (3%)
Frame = +1
Query: 169 NSNPGDKLEGSDAAPDDPVHLKRRVGLFSGVALIVGTMIGSGIFVSPSGLLARTGSVGIS 348
N+N G+ L A P L+ VGL G++LIVGTMIGSGIF S SG+ TGS G+
Sbjct: 226 NNNMGEGL----ATSGSPATLRPEVGLLGGISLIVGTMIGSGIFASASGVFMYTGSAGLG 281
Query: 349 FIIWMACXXXXXXXXXXXXXXXTMNTSSGAEYAYFMDAFGGPPAFLFSWVSTLVLKPSQM 528
+W C TM SGAEYAY AFG AFLFSW ST++LKPSQ+
Sbjct: 282 IAVWALCGVIAMMGSLCYAELGTMIVKSGAEYAYLNAAFGERVAFLFSWTSTILLKPSQI 341
Query: 529 AIICLSFAKYAVEPFVAECE--PPDS-----LVKLVAVISIVMILXVNCYSVNLATNVQN 687
AI+ L+F +Y VEPF C PD L KL+A + I +I VNC+SV LAT VQ
Sbjct: 342 AIVSLAFGQYVVEPFFPTCSGFDPDRLDLKILEKLLAAVCIGVITYVNCFSVKLATRVQV 401
Query: 688 IFTAAKLVAIAIIVCGGAYKL 750
+FTAAKL+AIA+++ G +L
Sbjct: 402 VFTAAKLIAIAMLIITGLVRL 422
Score = 113 bits (271), Expect = 2e-25
Identities = 54/140 (38%), Positives = 77/140 (55%)
Frame = +1
Query: 220 PVHLKRRVGLFSGVALIVGTMIGSGIFVSPSGLLARTGSVGISFIIWMACXXXXXXXXXX 399
P L+R++G G+++IVG+MIGSGIF S ++ +GSVG + ++W C
Sbjct: 35 PARLERKIGFVGGISIIVGSMIGSGIFASARWVMVYSGSVGFTLVVWSLCGLLCSFGALS 94
Query: 400 XXXXXTMNTSSGAEYAYFMDAFGGPPAFLFSWVSTLVLKPSQMAIICLSFAKYAVEPFVA 579
SG E YF AFG PAFL+SW LV+KPS +A+I L+FA Y VE F
Sbjct: 95 YIELGLAIPKSGGERTYFKAAFGELPAFLYSWTVMLVIKPSALALILLTFATYLVEAFFP 154
Query: 580 ECEPPDSLVKLVAVISIVMI 639
C + L L+ +++ I
Sbjct: 155 GCGNREDLAPLLKLLAAAAI 174
>SB_47706| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 539
Score = 154 bits (373), Expect = 9e-38
Identities = 79/180 (43%), Positives = 103/180 (57%), Gaps = 1/180 (0%)
Frame = +1
Query: 241 VGLFSGVALIVGTMIGSGIFVSPSGLLARTGSVGISFIIWMACXXXXXXXXXXXXXXXTM 420
+ L GVA+I+G MIGSGIFVSP +L TGSVG+ + W C T+
Sbjct: 16 ITLLQGVAIIIGIMIGSGIFVSPKFVLENTGSVGMMVVAWALCGLVATLGSLCYCELGTL 75
Query: 421 NTSSGAEYAYFMDAFGGPPAFLFSWVSTLVLKPSQMAIICLSFAKYAVEPFVAECEP-PD 597
SG E YF +AFG PAFL SW LVLKPS +AII ++FA YA PF+A P P
Sbjct: 76 IQKSGGELVYFREAFGSLPAFLVSWTIILVLKPSSIAIISMAFASYAYLPFMAPGTPEPT 135
Query: 598 SLVKLVAVISIVMILXVNCYSVNLATNVQNIFTAAKLVAIAIIVCGGAYKLILXNTRHLQ 777
+ +KL+A I+++ VNC S A Q +F KL AIA++V GAY +T++ Q
Sbjct: 136 TTIKLIAAGCIILLTIVNCVSTQFAAKSQVVFMVMKLTAIAVVVLLGAYHAFSGHTKNFQ 195
>SB_24307| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 407
Score = 145 bits (352), Expect = 3e-35
Identities = 70/160 (43%), Positives = 95/160 (59%), Gaps = 2/160 (1%)
Frame = +1
Query: 169 NSNPGDKLEGSDAAPDDPVH--LKRRVGLFSGVALIVGTMIGSGIFVSPSGLLARTGSVG 342
N D L S PV L+RRVGL SG++LIVGTMIGSGIF SP ++ GSVG
Sbjct: 25 NDRTTDNLLASSEIEGSPVFIGLQRRVGLTSGISLIVGTMIGSGIFASPRYVMENCGSVG 84
Query: 343 ISFIIWMACXXXXXXXXXXXXXXXTMNTSSGAEYAYFMDAFGGPPAFLFSWVSTLVLKPS 522
++ I+W C TM SGAEY Y +AFG P FL++W ST++LKPS
Sbjct: 85 LTLIVWGLCGLLAISGALCYSELGTMIPRSGAEYTYLYEAFGPLPGFLYAWTSTIILKPS 144
Query: 523 QMAIICLSFAKYAVEPFVAECEPPDSLVKLVAVISIVMIL 642
Q+AIICL+F Y +EPF C + L+ L+ +++ + ++
Sbjct: 145 QVAIICLAFGAYVIEPFFPACSGREDLIPLIKLLAAMAVV 184
Score = 119 bits (286), Expect = 3e-27
Identities = 60/139 (43%), Positives = 84/139 (60%), Gaps = 3/139 (2%)
Frame = +1
Query: 223 VHLKRRVGLFSGVALIVGTMIGSGIFVSPSGLLARTGSVGISFIIWMACXXXXXXXXXXX 402
V+LK+ VG+ SG+++IVGTMIGSGIF SP ++ +GS+G + ++W+ C
Sbjct: 267 VNLKKEVGVVSGMSIIVGTMIGSGIFASPRWVMMFSGSLGFTLVVWVLCGLLSLLGALCY 326
Query: 403 XXXXTMNTSSGAEYAYFMDAFGGPPAFLFSWVSTLVLKPSQMAIICLSFAKYAVEPFVAE 582
SGAEYAY + FG +FLFSW LV +P+ AII L+FA Y +EP
Sbjct: 327 IELGLAVPKSGAEYAYLGEGFGALASFLFSWTQVLVYRPASFAIILLTFAYYVMEPIFPG 386
Query: 583 C-EPPD--SLVKLVAVISI 630
C E PD L+KL+A ++I
Sbjct: 387 CLERPDLQPLLKLLAAVAI 405
>SB_28982| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1287
Score = 142 bits (343), Expect = 4e-34
Identities = 75/196 (38%), Positives = 110/196 (56%), Gaps = 7/196 (3%)
Frame = +1
Query: 184 DKLEGSDAAP----DDPVHLKRRVGLFSGVALIVGTMIGSGIFVSPSGLLARTGSVGISF 351
+ L+ +A P D+ + L+R VGL VA +VGT+IGSGIF +P +L TGSVG+S
Sbjct: 787 EPLQDENACPKQTQDEYIGLRRNVGLSGAVAFLVGTIIGSGIFATPRWVLLYTGSVGLSL 846
Query: 352 IIWMACXXXXXXXXXXXXXXXTMNTSSGAEYAYFMDAFGGPPAFLFSWVSTLVLKPSQMA 531
++W C M G EYAY M AFG AFL+SW+S LKP+ +
Sbjct: 847 LVWALCGMIALFGSLSYVELALMIPRCGGEYAYLMQAFGPFAAFLYSWISVCFLKPATV- 905
Query: 532 IICLSFAKYAVEPFVAECEPPDSLV---KLVAVISIVMILXVNCYSVNLATNVQNIFTAA 702
+I L+F Y +EPF C + LV K++A ++ +I VNC SV ++ +Q FT
Sbjct: 906 LILLAFGAYVIEPFFPHCSHREDLVPVIKILAASALGVITIVNCASVKWSSRIQIAFTVG 965
Query: 703 KLVAIAIIVCGGAYKL 750
K++AI ++V G ++
Sbjct: 966 KMIAILMLVLTGIVRI 981
>SB_51333| Best HMM Match : Yip1 (HMM E-Value=2.7)
Length = 171
Score = 104 bits (250), Expect = 7e-23
Identities = 57/162 (35%), Positives = 88/162 (54%), Gaps = 6/162 (3%)
Frame = +1
Query: 160 DDGNSNPGDKLEGSDAAPDDPVH------LKRRVGLFSGVALIVGTMIGSGIFVSPSGLL 321
+D N N + + D APD+ ++ LKR +G+ +GV+L+VG +IGSGIF +P ++
Sbjct: 6 EDPNENVTLRAD-EDGAPDESLNVEPSVTLKRPLGVPTGVSLLVGIIIGSGIFATPKWVM 64
Query: 322 ARTGSVGISFIIWMACXXXXXXXXXXXXXXXTMNTSSGAEYAYFMDAFGGPPAFLFSWVS 501
+GSVG+S ++W M SG EY Y ++AFG PAFLF+W+
Sbjct: 65 VYSGSVGLSLVVWCLGGLISLFGSLCYIELGLMIPVSGGEYEYLLEAFGPLPAFLFAWLY 124
Query: 502 TLVLKPSQMAIICLSFAKYAVEPFVAECEPPDSLVKLVAVIS 627
+L +K + I+ L F Y EPF C + L +L +I+
Sbjct: 125 SLFIKNMGIVILLLVFGAYVTEPFYPGCNEREDLERLRKLIA 166
>SB_27096| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 949
Score = 54.4 bits (125), Expect = 1e-07
Identities = 23/67 (34%), Positives = 40/67 (59%)
Frame = +1
Query: 169 NSNPGDKLEGSDAAPDDPVHLKRRVGLFSGVALIVGTMIGSGIFVSPSGLLARTGSVGIS 348
+ P ++ + + L+R +GL + ++L G M+GSGIF+S +L +GSVG+S
Sbjct: 240 SGEPVASVDAGNGKKSEEFGLRRDLGLCASISLSGGAMVGSGIFISAQWVLVYSGSVGMS 299
Query: 349 FIIWMAC 369
+IW+ C
Sbjct: 300 LLIWLLC 306
>SB_52606| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 104
Score = 53.2 bits (122), Expect = 2e-07
Identities = 22/47 (46%), Positives = 34/47 (72%)
Frame = +1
Query: 229 LKRRVGLFSGVALIVGTMIGSGIFVSPSGLLARTGSVGISFIIWMAC 369
L+R +GL + ++L G M+GSGIF+S +L +GSVG+S +IW+ C
Sbjct: 25 LRRDLGLCASISLSGGVMVGSGIFISAQWVLVYSGSVGMSLLIWLLC 71
>SB_18408| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 43
Score = 48.8 bits (111), Expect = 5e-06
Identities = 22/39 (56%), Positives = 30/39 (76%)
Frame = +1
Query: 634 MILXVNCYSVNLATNVQNIFTAAKLVAIAIIVCGGAYKL 750
+I VNC+SV LAT VQ +FTAAKL+AIA+++ G +L
Sbjct: 2 VITYVNCFSVKLATRVQVVFTAAKLIAIAMLIITGLVRL 40
>SB_35680| Best HMM Match : Sushi (HMM E-Value=4.4e-22)
Length = 442
Score = 37.5 bits (83), Expect = 0.012
Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +1
Query: 106 WRGCSASCDAEDGTTGAFDDGNSNPGD-KLEGSDAAPDDPVH 228
W G +ASC DG DDG+ + GD +G+D DD H
Sbjct: 94 WTGSTASCTGNDGHEDGHDDGDGDDGDADGDGNDHGDDDGFH 135
>SB_8425| Best HMM Match : EGF (HMM E-Value=0)
Length = 1955
Score = 37.5 bits (83), Expect = 0.012
Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +1
Query: 106 WRGCSASCDAEDGTTGAFDDGNSNPGD-KLEGSDAAPDDPVH 228
W G +ASC DG DDG+ + GD +G+D DD H
Sbjct: 1607 WTGSTASCTGNDGHEDGHDDGDGDDGDADGDGNDHGDDDGFH 1648
>SB_44981| Best HMM Match : AA_permease (HMM E-Value=9.6e-13)
Length = 446
Score = 35.5 bits (78), Expect = 0.049
Identities = 45/206 (21%), Positives = 77/206 (37%), Gaps = 16/206 (7%)
Frame = +1
Query: 193 EGSDAAPDDPVHLKRRVGLFSGVALIVGTMIGSGIFVSPSGLLARTGSVGISFIIWMACX 372
+G D P D L+R + F +L VGT++G+G++V +G LAR + I +
Sbjct: 15 KGQDFGPSDSP-LRRCLNTFDLTSLGVGTVVGAGLYV-VTGELARDVAGPAVVISFFIAA 72
Query: 373 XXXXXXXXXXXXXXTMNTSSGAEYAYFMDAFGGPPAFLFSW--VSTLVLKPSQMAIICLS 546
+ +G+ Y Y G AF+ W + ++ + +A C
Sbjct: 73 VAALLSGLCYAEFGSRIPKAGSAYVYTYVTLGELLAFIVGWNMILEYLIASATLARSCSE 132
Query: 547 FAKY----AVEPF---------VAECEP-PDSLVKLVAVISIVMILXVNCYSVNLATNVQ 684
+ A+ F V P PD L +A I +++ C+ V +
Sbjct: 133 YINAISGGAIYKFFMSDIATWHVKALGPFPDFLALAIATIITIIV----CFGVKHSAWFN 188
Query: 685 NIFTAAKLVAIAIIVCGGAYKLILXN 762
I + I +C G Y + N
Sbjct: 189 KITLLVNMAVIVFTICVGLYFIDTSN 214
>SB_11966| Best HMM Match : adh_short (HMM E-Value=4.1e-32)
Length = 728
Score = 35.5 bits (78), Expect = 0.049
Identities = 45/206 (21%), Positives = 77/206 (37%), Gaps = 16/206 (7%)
Frame = +1
Query: 193 EGSDAAPDDPVHLKRRVGLFSGVALIVGTMIGSGIFVSPSGLLARTGSVGISFIIWMACX 372
+G D P D L+R + F +L VGT++G+G++V +G LAR + I +
Sbjct: 297 KGQDFGPSDSP-LRRCLNTFDLTSLGVGTVVGAGLYV-VTGELARDVAGPAVVISFFIAA 354
Query: 373 XXXXXXXXXXXXXXTMNTSSGAEYAYFMDAFGGPPAFLFSW--VSTLVLKPSQMAIICLS 546
+ +G+ Y Y G AF+ W + ++ + +A C
Sbjct: 355 VAALLSGLCYAEFGSRIPKAGSAYVYTYVTLGELLAFIVGWNMILEYLIASATLARSCSE 414
Query: 547 FAKY----AVEPF---------VAECEP-PDSLVKLVAVISIVMILXVNCYSVNLATNVQ 684
+ A+ F V P PD L +A I +++ C+ V +
Sbjct: 415 YINAISGGAIYKFFMSDIATWHVKALGPFPDFLALAIATIITIIV----CFGVKHSAWFN 470
Query: 685 NIFTAAKLVAIAIIVCGGAYKLILXN 762
I + I +C G Y + N
Sbjct: 471 KITLLVNMAVIVFTICVGLYFIDTSN 496
>SB_59534| Best HMM Match : AA_permease (HMM E-Value=3.1e-05)
Length = 889
Score = 33.9 bits (74), Expect = 0.15
Identities = 14/41 (34%), Positives = 27/41 (65%)
Frame = +1
Query: 634 MILXVNCYSVNLATNVQNIFTAAKLVAIAIIVCGGAYKLIL 756
+++ +NC SV ++ +Q FT AK+VAI ++V G ++ +
Sbjct: 576 VVVFLNCASVKWSSRIQVGFTVAKMVAIVMLVFTGVVRIAM 616
>SB_23660| Best HMM Match : AA_permease (HMM E-Value=1.3e-18)
Length = 573
Score = 32.3 bits (70), Expect = 0.45
Identities = 21/89 (23%), Positives = 38/89 (42%)
Frame = +1
Query: 229 LKRRVGLFSGVALIVGTMIGSGIFVSPSGLLARTGSVGISFIIWMACXXXXXXXXXXXXX 408
LKR + +F +L VG +G+G++V +G +AR + + +
Sbjct: 25 LKRCLNVFDLTSLGVGATVGAGLYV-VTGQIARDVAGPAVVLSFFIAAVAAFLAGICYAE 83
Query: 409 XXTMNTSSGAEYAYFMDAFGGPPAFLFSW 495
T++G+ Y Y + G AF+ W
Sbjct: 84 FGCRITTAGSAYVYTYTSIGEVWAFIIGW 112
>SB_5139| Best HMM Match : WD40 (HMM E-Value=8.5e-27)
Length = 855
Score = 31.9 bits (69), Expect = 0.60
Identities = 21/74 (28%), Positives = 36/74 (48%)
Frame = +1
Query: 496 VSTLVLKPSQMAIICLSFAKYAVEPFVAECEPPDSLVKLVAVISIVMILXVNCYSVNLAT 675
V+ +V P+ I CLSF+K + E P SL L+ +I+I I+ ++ + T
Sbjct: 60 VTGVVAYPAGKTISCLSFSKDGKYLVIGEVTP--SLFVLIIIITIFFIIIISITTFIPVT 117
Query: 676 NVQNIFTAAKLVAI 717
+ N F ++ I
Sbjct: 118 VITNSFIVMIIIII 131
>SB_25012| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 436
Score = 30.7 bits (66), Expect = 1.4
Identities = 16/51 (31%), Positives = 21/51 (41%)
Frame = +1
Query: 64 GNACNGSTREGGLVWRGCSASCDAEDGTTGAFDDGNSNPGDKLEGSDAAPD 216
G+ C+ GG GC A CD+ D G + G +G DA D
Sbjct: 58 GDGCDAGCDSGGPDGDGCDAGCDSGGPDGDGCDAGCDSGGPDGDGCDAGCD 108
Score = 29.5 bits (63), Expect = 3.2
Identities = 15/52 (28%), Positives = 21/52 (40%)
Frame = +1
Query: 64 GNACNGSTREGGLVWRGCSASCDAEDGTTGAFDDGNSNPGDKLEGSDAAPDD 219
G+ C+ GG GC A CD+ D G + G +G D+ D
Sbjct: 6 GDGCDAGCDSGGPDGDGCDAGCDSGGPDGDGCDAGCDSGGPDGDGCDSGGPD 57
Score = 29.1 bits (62), Expect = 4.2
Identities = 18/51 (35%), Positives = 23/51 (45%)
Frame = +1
Query: 64 GNACNGSTREGGLVWRGCSASCDAEDGTTGAFDDGNSNPGDKLEGSDAAPD 216
G+ C+ GG GC A CD+ G G DG + G +G DA D
Sbjct: 20 GDGCDAGCDSGGPDGDGCDAGCDS-GGPDG---DGCDSGGPDGDGCDAGCD 66
>SB_22151| Best HMM Match : MORN (HMM E-Value=6)
Length = 186
Score = 30.7 bits (66), Expect = 1.4
Identities = 30/92 (32%), Positives = 42/92 (45%), Gaps = 3/92 (3%)
Frame = +3
Query: 75 QREHTRRR-IGLARVLSQLRCRRRHDGSVRRWQLKPRRQAGGVGRSSG--RPCSPQETGG 245
+RE RRR + R + + R R RR +++ RR+ GVGR SG R + G
Sbjct: 46 RREMERRREMERRREMERRREMERRREMERRREMERRRERSGVGRWSGGERWSGVERWSG 105
Query: 246 TLQWGGSNCRHYDWIRNIRIALWAFGAYRLSG 341
+W G R R +A W+ G R SG
Sbjct: 106 GERWSGVE-RWSGVARWSGVARWS-GVARWSG 135
>SB_2181| Best HMM Match : RGS (HMM E-Value=0.11)
Length = 1313
Score = 30.7 bits (66), Expect = 1.4
Identities = 15/63 (23%), Positives = 26/63 (41%)
Frame = +1
Query: 34 EQCITMNSRQGNACNGSTREGGLVWRGCSASCDAEDGTTGAFDDGNSNPGDKLEGSDAAP 213
+ ++ N GN N + G+V + + D DG + DDG+ + G + P
Sbjct: 288 DDVVSANDSDGNDNNDNIDRDGVVGANGNNNDDVTDGARNSGDDGDGSIGGDAQDDRVGP 347
Query: 214 DDP 222
P
Sbjct: 348 HSP 350
>SB_30749| Best HMM Match : FARP (HMM E-Value=0.032)
Length = 2565
Score = 30.3 bits (65), Expect = 1.8
Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 4/53 (7%)
Frame = +3
Query: 72 MQREHTRRRIGLARVLSQLRCRRRHDGSVRRWQ----LKPRRQAGGVGRSSGR 218
++R RRR L R+ + R RRR +RR + L+ RR+ GG R GR
Sbjct: 365 LRRRRNRRRRRLRRIRRRRRRRRRRRRKLRRRRRRRPLRRRRRRGGRRRRRGR 417
>SB_34168| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 454
Score = 29.5 bits (63), Expect = 3.2
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -2
Query: 157 TLPSCRLRHRSWLSTRAKPIRLRVCS 80
T CR+R R +L T P+R+R+CS
Sbjct: 411 TRAPCRVRIRLFLVTTTPPLRVRICS 436
>SB_53813| Best HMM Match : RA (HMM E-Value=1.1)
Length = 553
Score = 29.5 bits (63), Expect = 3.2
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -2
Query: 157 TLPSCRLRHRSWLSTRAKPIRLRVCS 80
T CR+R R +L T P+R+R+CS
Sbjct: 510 TRAPCRVRIRLFLVTTTPPLRVRICS 535
>SB_30249| Best HMM Match : Extensin_2 (HMM E-Value=0.035)
Length = 624
Score = 29.5 bits (63), Expect = 3.2
Identities = 14/44 (31%), Positives = 19/44 (43%)
Frame = +1
Query: 52 NSRQGNACNGSTREGGLVWRGCSASCDAEDGTTGAFDDGNSNPG 183
N G+ +G G GC CD ++G G DDG+ G
Sbjct: 355 NGYGGDVDDGCGDGGDYNNGGCDDGCDGDEGDGGGDDDGDGGDG 398
>SB_41173| Best HMM Match : Sas10_Utp3 (HMM E-Value=2.8)
Length = 405
Score = 29.1 bits (62), Expect = 4.2
Identities = 15/55 (27%), Positives = 28/55 (50%)
Frame = +1
Query: 85 TREGGLVWRGCSASCDAEDGTTGAFDDGNSNPGDKLEGSDAAPDDPVHLKRRVGL 249
+++ G+ A D+E+GT G + G+K+ S ++ D H KR++ L
Sbjct: 283 SQDSGVAEAESPAEQDSEEGTPGMSPPVDETDGNKVHRSTSSISDDGHKKRKLQL 337
>SB_19847| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 151
Score = 29.1 bits (62), Expect = 4.2
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = +1
Query: 91 EGGLVWRGCSASCDAEDGTTGAFDDGNSNPGDKLEGSDAAPDD 219
+GG GC +S D ++ + DDG + D +G D DD
Sbjct: 77 DGGCGGGGCGSSSDGDNDDSNDVDDGGGDGDDDNDG-DGVDDD 118
>SB_18414| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 300
Score = 28.7 bits (61), Expect = 5.6
Identities = 18/56 (32%), Positives = 24/56 (42%)
Frame = +3
Query: 105 LARVLSQLRCRRRHDGSVRRWQLKPRRQAGGVGRSSGRPCSPQETGGTLQWGGSNC 272
+ V+S R RRR D R R+ AG G G+P +E +W NC
Sbjct: 177 MVAVMSMTRIRRRADVGSRNCT---RKTAGQKGTVRGKPLVKKELYAEDRWSKRNC 229
>SB_58829| Best HMM Match : HC2 (HMM E-Value=5.8)
Length = 959
Score = 28.3 bits (60), Expect = 7.4
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = +3
Query: 18 HSTVLRAMHHNEQPTG*CMQREHTRRRIGLARVLSQLRCR 137
H+T+L+ +HHN+ T Q H + L + L +C+
Sbjct: 669 HTTLLKQVHHNQCHTTLLKQAHHNQCHTALLKQLHHNQCQ 708
>SB_57119| Best HMM Match : Ribosomal_L7Ae (HMM E-Value=1.4e-20)
Length = 1423
Score = 28.3 bits (60), Expect = 7.4
Identities = 17/43 (39%), Positives = 22/43 (51%)
Frame = +1
Query: 70 ACNGSTREGGLVWRGCSASCDAEDGTTGAFDDGNSNPGDKLEG 198
+CN T +GG S +CD E G DDG S G++ EG
Sbjct: 1175 SCN--TEQGGPQEAQDSRACDGEHSDDGEADDG-SESGEESEG 1214
>SB_50981| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 88
Score = 28.3 bits (60), Expect = 7.4
Identities = 17/57 (29%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
Frame = +1
Query: 52 NSRQGNACNGSTREGGLVWRGCSASCDA-EDGTTGAFDDGNSNPGDKLEGSDAAPDD 219
N +G+ + GG G +CD +DG G DDG+ + G D DD
Sbjct: 5 NHYEGDDIDDDGGGGGDAEDGNDHTCDGNDDGDDGVGDDGDDGGDNDGSGDDGDDDD 61
>SB_3481| Best HMM Match : Viral_helicase1 (HMM E-Value=1.1)
Length = 1347
Score = 28.3 bits (60), Expect = 7.4
Identities = 17/50 (34%), Positives = 25/50 (50%)
Frame = +1
Query: 193 EGSDAAPDDPVHLKRRVGLFSGVALIVGTMIGSGIFVSPSGLLARTGSVG 342
EG+D P D VH+ + SGV ++ T + I V P L++ T G
Sbjct: 525 EGTDVEPGDIVHVTGVFDINSGVCILDNT-ANNYIIVHPDTLISGTTIAG 573
>SB_28951| Best HMM Match : DUF81 (HMM E-Value=8.5)
Length = 267
Score = 28.3 bits (60), Expect = 7.4
Identities = 16/56 (28%), Positives = 27/56 (48%)
Frame = +1
Query: 571 FVAECEPPDSLVKLVAVISIVMILXVNCYSVNLATNVQNIFTAAKLVAIAIIVCGG 738
FVA+C LV +V +++ ++ V+C +V V + T LV + V G
Sbjct: 38 FVADCVTVGGLVFVVDCVTVGLVFVVDCVTVGGLVFVADCVTVGGLVFVVDCVTVG 93
>SB_22348| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 255
Score = 28.3 bits (60), Expect = 7.4
Identities = 17/55 (30%), Positives = 26/55 (47%)
Frame = +1
Query: 133 AEDGTTGAFDDGNSNPGDKLEGSDAAPDDPVHLKRRVGLFSGVALIVGTMIGSGI 297
AE G A D SNP + + DAA D +H+ + + I+ M+G G+
Sbjct: 161 AEKGERTADQDEQSNPLPEQQTDDAA-SDAIHVTLTTSVALSLYFIITIMMGVGL 214
>SB_24802| Best HMM Match : Phage_fiber_C (HMM E-Value=1.1)
Length = 1072
Score = 27.9 bits (59), Expect = 9.8
Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = -2
Query: 226 EQGRPELRPTPPACLLGLS-CHRRTLPSCRLRHRSWL 119
E G L PA L G++ C RT+PS + SW+
Sbjct: 596 EGGAISLTNAQPAVLSGVTKCESRTVPSATASNHSWI 632
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,080,746
Number of Sequences: 59808
Number of extensions: 624096
Number of successful extensions: 1965
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 1704
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1941
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2131907602
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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