Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_F_B14
         (779 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    28   0.28 
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    27   0.49 
AJ441131-1|CAD29630.1|  567|Anopheles gambiae putative chitin bi...    26   1.5  
AJ439353-6|CAD27928.1|  695|Anopheles gambiae putative G-protein...    26   1.5  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            25   2.0  
U43499-1|AAA93302.1|  278|Anopheles gambiae a-emp protein.             25   3.5  
AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger transc...    23   8.0  

>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
            precursor protein.
          Length = 1623

 Score = 28.3 bits (60), Expect = 0.28
 Identities = 14/40 (35%), Positives = 18/40 (45%)
 Frame = +3

Query: 600  FGQIGCGHFDCDDLXSELLQCQLGNECAKYFHSGQTRCDR 719
            F + GC   DCD   S+  QC    +C    +    RCDR
Sbjct: 979  FSEDGCHACDCDPSGSKGSQCNQYGQCPCNDNVEGRRCDR 1018



 Score = 23.8 bits (49), Expect = 6.1
 Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
 Frame = +3

Query: 609 IGCGHFDCDDLXSELLQCQLGNEC-AKYFHSGQTRCDR 719
           I CG   CD + S  LQC     C  K   +G+ +CDR
Sbjct: 395 INCG---CDPVGSRSLQCNAEGRCQCKPGVTGE-KCDR 428


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 27.5 bits (58), Expect = 0.49
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = +1

Query: 130  DAEDGTTGAFDDGNSNPGDKLEGSDAAP 213
            D+ DG TG+ D+G+ + G  + G    P
Sbjct: 2039 DSGDGATGSGDNGSQHGGGSISGGGGTP 2066


>AJ441131-1|CAD29630.1|  567|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 567

 Score = 25.8 bits (54), Expect = 1.5
 Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
 Frame = -1

Query: 482 NAGGPPKASMK*AY-SAPDDVFIVPNSAYASAPSNESRPHAIQMMKLMPTEPVRAKSPEG 306
           N G  P + M  +Y S P    IVP+     AP  +SRP A+ +    P  P     P+G
Sbjct: 38  NIGVLPASKMPTSYPSLPAP--IVPSPG---APIQQSRPQAVTVRSSAPMLPKGGLPPKG 92

Query: 305 DTNIPDPI 282
             +   P+
Sbjct: 93  VPSSASPV 100


>AJ439353-6|CAD27928.1|  695|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 695

 Score = 25.8 bits (54), Expect = 1.5
 Identities = 18/68 (26%), Positives = 33/68 (48%), Gaps = 5/68 (7%)
 Frame = -1

Query: 488 KRNAGGPPKASMK*AYSAPDDVFIVPNSAYASAPSNESR-----PHAIQMMKLMPTEPVR 324
           +  AG P +A+     + P D+F  P+  YAS  +  +      P    ++K+  ++ +R
Sbjct: 81  EETAGNPVRAAAAGEVTRPPDIFPDPDKIYASFINKSTMKRNHYPGEENVIKVYSSKSLR 140

Query: 323 AKSPEGDT 300
            KSP+  T
Sbjct: 141 -KSPQAHT 147


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 25.4 bits (53), Expect = 2.0
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = +1

Query: 241  VGLFSGVALIVGTMIGSGIFVSPSGLLARTGS 336
            VG+   ++  +G MIGSGI      L A +GS
Sbjct: 2789 VGMGLSLSASIGVMIGSGITFGYFALAASSGS 2820


>U43499-1|AAA93302.1|  278|Anopheles gambiae a-emp protein.
          Length = 278

 Score = 24.6 bits (51), Expect = 3.5
 Identities = 15/29 (51%), Positives = 19/29 (65%)
 Frame = -1

Query: 431 DDVFIVPNSAYASAPSNESRPHAIQMMKL 345
           DDV IVPN    SA S ES+ HA + ++L
Sbjct: 49  DDVVIVPNIPMLSATS-ESK-HAARFLRL 75


>AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger
           transcription factor pannier protein.
          Length = 537

 Score = 23.4 bits (48), Expect = 8.0
 Identities = 13/44 (29%), Positives = 19/44 (43%)
 Frame = +2

Query: 434 ALNTPISWTPSGAHPHSSFHGYRHWF*NHHKWPLFA*ASPNTPL 565
           A N P+    S A PHS +  +   F   + WP     + +T L
Sbjct: 35  AANAPVYVPSSRALPHSQYGAHSANFSAQNGWPTDGFGTTHTQL 78


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 890,976
Number of Sequences: 2352
Number of extensions: 19443
Number of successful extensions: 51
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 51
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 81497388
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)