Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_F_B11
         (909 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    23   2.5  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    23   3.3  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    23   3.3  
AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    23   4.4  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    23   4.4  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    22   5.8  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    22   7.6  

>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 11/40 (27%), Positives = 21/40 (52%)
 Frame = +1

Query: 313 ILNAFKSTDMLYVSWAIKKSNWLITEKTYSNFINPNYLNS 432
           I+N F S   +++   I  S+  + +  Y +  NP+ L+S
Sbjct: 26  IINTFYSNKEIFLRELISNSSDALDKIRYESLTNPSRLDS 65


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 13/50 (26%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
 Frame = +1

Query: 412 NPNYLNSDIFPHMMTKAINKLMLHIRLHLKDE-ERVEQFYRNEKVPSDAA 558
           +PNY++ ++FP+    AI      ++    D      QFY +E   +  A
Sbjct: 446 DPNYISPEVFPN-TNNAIMTPPASVQTESSDNYNSFHQFYSSESSQNQVA 494


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 13/50 (26%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
 Frame = +1

Query: 412 NPNYLNSDIFPHMMTKAINKLMLHIRLHLKDE-ERVEQFYRNEKVPSDAA 558
           +PNY++ ++FP+    AI      ++    D      QFY +E   +  A
Sbjct: 394 DPNYISPEVFPN-TNNAIMTPPASVQTESSDNYNSFHQFYSSESSQNQVA 442


>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 7/26 (26%), Positives = 14/26 (53%)
 Frame = +1

Query: 364 KKSNWLITEKTYSNFINPNYLNSDIF 441
           K + W  T + ++ F N   ++ +IF
Sbjct: 309 KTAGWSATSRVFATFYNKPLIHKEIF 334


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = -3

Query: 691 RSYGYRFSPGCLLIFHTNVLINDYRYCVY 605
           R +G+    GCL+ F  N ++  + YC Y
Sbjct: 532 RIFGFIIIIGCLIQF--NTIVFAFCYCYY 558


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 22.2 bits (45), Expect = 5.8
 Identities = 10/30 (33%), Positives = 18/30 (60%)
 Frame = -1

Query: 546 RYLFVSVKLFNTFFVLQMQSYV*HKFINSL 457
           RY+FV+  L   +FV + Q Y  ++ ++ L
Sbjct: 139 RYVFVTSYLLFDYFVQRNQEYKYYQILSHL 168


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.8 bits (44), Expect = 7.6
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -1

Query: 69  TVYCVYYRVHQ 37
           TVY +YY VH+
Sbjct: 155 TVYYIYYSVHE 165


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 206,297
Number of Sequences: 336
Number of extensions: 4248
Number of successful extensions: 13
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 25341085
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)