Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P16_F_B11
(909 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB026846-1|BAA90302.2| 4219|Caenorhabditis elegans kettin protein. 31 0.86
AF067220-1|AAK84500.1| 1014|Caenorhabditis elegans Hypothetical ... 30 2.0
Z35400-1|CAA84584.1| 532|Caenorhabditis elegans putative transp... 30 2.6
U64848-2|AAM29669.2| 376|Caenorhabditis elegans Hypothetical pr... 30 2.6
U12433-1|AAA20582.1| 532|Caenorhabditis elegans putative transp... 30 2.6
Z46676-1|CAA86661.1| 799|Caenorhabditis elegans Hypothetical pr... 29 4.6
X16473-1|CAA34493.1| 799|Caenorhabditis elegans zyg-11 protein ... 29 4.6
Z81492-10|CAB04029.2| 322|Caenorhabditis elegans Hypothetical p... 29 6.1
U64855-1|AAB04980.1| 594|Caenorhabditis elegans Hypothetical pr... 29 6.1
U29535-14|AAK31455.3| 516|Caenorhabditis elegans Hypothetical p... 29 6.1
U28941-6|AAC71101.2| 1788|Caenorhabditis elegans Hypothetical pr... 29 6.1
AY314774-1|AAQ84881.1| 1757|Caenorhabditis elegans methuselah-li... 29 6.1
AF078157-4|AAN84816.1| 365|Caenorhabditis elegans Hypothetical ... 28 8.0
>AB026846-1|BAA90302.2| 4219|Caenorhabditis elegans kettin protein.
Length = 4219
Score = 31.5 bits (68), Expect = 0.86
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +1
Query: 709 TFFLKNETNRYLNIVERVPYY 771
TFFLKN TNRYL + E P +
Sbjct: 889 TFFLKNTTNRYLQVEEGEPIH 909
>AF067220-1|AAK84500.1| 1014|Caenorhabditis elegans Hypothetical
protein C33E10.6 protein.
Length = 1014
Score = 30.3 bits (65), Expect = 2.0
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = -2
Query: 821 HFFIIKSVAFALNVGLL*YGTRSTIFKYLFVSFFKK 714
H+ ++K++ F L G+ + IF+Y F SF+ K
Sbjct: 166 HYCLVKNIKFLLGKGISSHAGAKYIFRYCFNSFWSK 201
>Z35400-1|CAA84584.1| 532|Caenorhabditis elegans putative
transposase protein.
Length = 532
Score = 29.9 bits (64), Expect = 2.6
Identities = 17/72 (23%), Positives = 32/72 (44%)
Frame = +1
Query: 259 IGNLLLIDMASQNKDVHFILNAFKSTDMLYVSWAIKKSNWLITEKTYSNFINPNYLNSDI 438
I L +A Q D H + F+++D W KK+N L++ + NY+N ++
Sbjct: 172 IDKFTLRRLAVQLNDEHVHIEGFQASDGWLKKW--KKTNGLVSRHVTTFITRANYVNKEL 229
Query: 439 FPHMMTKAINKL 474
K + ++
Sbjct: 230 TEQAAKKFVEEV 241
>U64848-2|AAM29669.2| 376|Caenorhabditis elegans Hypothetical
protein C50E3.6 protein.
Length = 376
Score = 29.9 bits (64), Expect = 2.6
Identities = 22/97 (22%), Positives = 44/97 (45%), Gaps = 4/97 (4%)
Frame = +1
Query: 349 VSWAIKKSNWLITEKTYSNFINPNYLNSDIFPHMMTKAINKLMLHIRLHLKDEERVEQFY 528
V W + ++ WL EK + +N + + K + +L+L+ +L D + + +
Sbjct: 93 VVWTLNETVWLKIEKGHQRVVNGESTFNK--RRVSGKTVMRLLLNNARYLFDYDELTGDF 150
Query: 529 RNEKVP----SDAAKWLCNCSVKFIEDNVNKHNNDNR 627
E P SD+ W C+ +V+ ++N H +R
Sbjct: 151 SMEISPVLWSSDSGAWQCHVTVR--QENGKSHTLTSR 185
>U12433-1|AAA20582.1| 532|Caenorhabditis elegans putative
transposase protein.
Length = 532
Score = 29.9 bits (64), Expect = 2.6
Identities = 17/72 (23%), Positives = 32/72 (44%)
Frame = +1
Query: 259 IGNLLLIDMASQNKDVHFILNAFKSTDMLYVSWAIKKSNWLITEKTYSNFINPNYLNSDI 438
I L +A Q D H + F+++D W KK+N L++ + NY+N ++
Sbjct: 172 IDKFTLRRLAVQLNDEHVHIEGFQASDGWLKKW--KKTNGLVSRHVTTFITRANYVNKEL 229
Query: 439 FPHMMTKAINKL 474
K + ++
Sbjct: 230 TEQAAKKFVEEV 241
>Z46676-1|CAA86661.1| 799|Caenorhabditis elegans Hypothetical
protein C08B11.1 protein.
Length = 799
Score = 29.1 bits (62), Expect = 4.6
Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Frame = +1
Query: 508 ERVEQFYRNEKVPSDAAKWLCNCSVKFIEDNVNKHNNDNRLLKRLCEKSISILEKID-NH 684
ER+ + N+ +P K + +CS E K +++ L+ +C S + KID
Sbjct: 24 ERIAELIENDALPEFDHKVIASCSNDIFEVLRQKKKLNHQTLQTMCSTSRFQINKIDLMG 83
Query: 685 NSVLLQ 702
N V LQ
Sbjct: 84 NKVELQ 89
>X16473-1|CAA34493.1| 799|Caenorhabditis elegans zyg-11 protein
protein.
Length = 799
Score = 29.1 bits (62), Expect = 4.6
Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Frame = +1
Query: 508 ERVEQFYRNEKVPSDAAKWLCNCSVKFIEDNVNKHNNDNRLLKRLCEKSISILEKID-NH 684
ER+ + N+ +P K + +CS E K +++ L+ +C S + KID
Sbjct: 24 ERIAELIENDALPEFDHKVIASCSNDIFEVLRQKKKLNHQTLQTMCSTSRFQINKIDLMG 83
Query: 685 NSVLLQ 702
N V LQ
Sbjct: 84 NKVELQ 89
>Z81492-10|CAB04029.2| 322|Caenorhabditis elegans Hypothetical
protein E03H4.3 protein.
Length = 322
Score = 28.7 bits (61), Expect = 6.1
Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 11/78 (14%)
Frame = +1
Query: 376 WLITEKTYSNFINPNYLNSDIFPHMMTKAINKLMLHIR-----LHLKDEERVEQF----- 525
+L+ + Y++F P ++ ++FP T++I+KL+ I L L + ++ F
Sbjct: 33 FLMPVELYTHF--PAIIHQELFPP--TRSIDKLIPGIEHSASTLRLPNSGQIFCFVETSE 88
Query: 526 -YRNEKVPSDAAKWLCNC 576
Y N++VPS AA WL C
Sbjct: 89 RYYNDRVPSIAATWLRRC 106
>U64855-1|AAB04980.1| 594|Caenorhabditis elegans Hypothetical
protein ZK742.2 protein.
Length = 594
Score = 28.7 bits (61), Expect = 6.1
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = +1
Query: 628 LLKRLCEKSISILEKIDNHNSVLLQKTTFFLKNETNRYLNIVERVPYYN 774
+LKR K S ++ IDN +++ + F++ T+ E +PY N
Sbjct: 1 MLKRRQPKYCSFMDSIDNSTTIIRKNLNRFIRELTDDGKLDFESIPYQN 49
>U29535-14|AAK31455.3| 516|Caenorhabditis elegans Hypothetical
protein C25H3.4 protein.
Length = 516
Score = 28.7 bits (61), Expect = 6.1
Identities = 16/59 (27%), Positives = 29/59 (49%)
Frame = +1
Query: 589 IEDNVNKHNNDNRLLKRLCEKSISILEKIDNHNSVLLQKTTFFLKNETNRYLNIVERVP 765
++ N N+ N+D+R L ++ ++ ID V K T F + N Y +++VP
Sbjct: 8 VKKNTNQRNSDSRKLFNRLKEEVNGESNIDKKGQVAQVKLTTFEGTQMNVY--TIDKVP 64
>U28941-6|AAC71101.2| 1788|Caenorhabditis elegans Hypothetical protein
F31D5.5 protein.
Length = 1788
Score = 28.7 bits (61), Expect = 6.1
Identities = 18/60 (30%), Positives = 32/60 (53%)
Frame = -2
Query: 878 VGI*MLIAYFSKLFMIRXGHFFIIKSVAFALNVGLL*YGTRSTIFKYLFVSFFKKNVVFC 699
+G+ M+ +FS + G ++ S AL++GL+ T + I + SFFK++ FC
Sbjct: 1593 IGLRMVCHFFSPKLRLFFG---VMTSPPAALSIGLIVPFTFTLILALVDTSFFKRDDCFC 1649
>AY314774-1|AAQ84881.1| 1757|Caenorhabditis elegans methuselah-like
protein MTH-1 protein.
Length = 1757
Score = 28.7 bits (61), Expect = 6.1
Identities = 18/60 (30%), Positives = 32/60 (53%)
Frame = -2
Query: 878 VGI*MLIAYFSKLFMIRXGHFFIIKSVAFALNVGLL*YGTRSTIFKYLFVSFFKKNVVFC 699
+G+ M+ +FS + G ++ S AL++GL+ T + I + SFFK++ FC
Sbjct: 1562 IGLRMVCHFFSPKLRLFFG---VMTSPPAALSIGLIVPFTFTLILALVDTSFFKRDDCFC 1618
>AF078157-4|AAN84816.1| 365|Caenorhabditis elegans Hypothetical
protein F25E5.16 protein.
Length = 365
Score = 28.3 bits (60), Expect = 8.0
Identities = 32/125 (25%), Positives = 56/125 (44%), Gaps = 1/125 (0%)
Frame = +1
Query: 334 TDMLYVSWAIKKSNWLITEKTYSNFINPNYLNSDIFPHMMTKAINKLMLHIRLHLKD-EE 510
TD L+V A +K NW T F + +YL DI+ H +I R +K
Sbjct: 34 TDKLFVCQA-EKYNWT-THFYRGQFFDEDYLIVDIYCH---SSIPSWSCDARTEVKFWNT 88
Query: 511 RVEQFYRNEKVPSDAAKWLCNCSVKFIEDNVNKHNNDNRLLKRLCEKSISILEKIDNHNS 690
++ + ++ + C +K+ +D +++ NN R + +CE IS + K N N
Sbjct: 89 TIQDIEHHYEMKRNCMS--CPPFIKW-KDLISRENNYVRNGRIVCEVLISEVPKKANKNQ 145
Query: 691 VLLQK 705
++ K
Sbjct: 146 AVIVK 150
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,572,059
Number of Sequences: 27780
Number of extensions: 396730
Number of successful extensions: 1078
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1024
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1078
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2318293978
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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