Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_F_B06
         (773 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL356752-1|CAI16578.1| 1134|Homo sapiens ATPase, Class VI, type ...    31   6.1  
AL356740-1|CAH70242.1| 1134|Homo sapiens ATPase, Class VI, type ...    31   6.1  
AL139384-1|CAI16947.1| 1134|Homo sapiens ATPase, Class VI, type ...    31   6.1  
AB028944-1|BAA82973.2| 1102|Homo sapiens KIAA1021 protein protein.     31   6.1  
AK123032-1|BAC85519.1|  274|Homo sapiens  factor.  protein.            30   8.0  

>AL356752-1|CAI16578.1| 1134|Homo sapiens ATPase, Class VI, type 11A
            protein.
          Length = 1134

 Score = 30.7 bits (66), Expect = 6.1
 Identities = 22/87 (25%), Positives = 38/87 (43%)
 Frame = -2

Query: 280  KTITFQVPQIVSQFANWSSRFEIHN*NFQTRYAHKECILIPLLSPSYLRQELRHQTTNIK 101
            K + F  PQ + QF    S+  +++  + T Y +     +P+L  S + Q +        
Sbjct: 889  KNVCFIFPQFLYQFFCGFSQQTLYDTAYLTLY-NISFTSLPILLYSLMEQHVGIDVLKRD 947

Query: 100  TELFTIIKKKGLSVWGVIIYFLILKTF 20
              L+  + K  L  W V IY+ +L  F
Sbjct: 948  PTLYRDVAKNALLRWRVFIYWTLLGLF 974


>AL356740-1|CAH70242.1| 1134|Homo sapiens ATPase, Class VI, type 11A
            protein.
          Length = 1134

 Score = 30.7 bits (66), Expect = 6.1
 Identities = 22/87 (25%), Positives = 38/87 (43%)
 Frame = -2

Query: 280  KTITFQVPQIVSQFANWSSRFEIHN*NFQTRYAHKECILIPLLSPSYLRQELRHQTTNIK 101
            K + F  PQ + QF    S+  +++  + T Y +     +P+L  S + Q +        
Sbjct: 889  KNVCFIFPQFLYQFFCGFSQQTLYDTAYLTLY-NISFTSLPILLYSLMEQHVGIDVLKRD 947

Query: 100  TELFTIIKKKGLSVWGVIIYFLILKTF 20
              L+  + K  L  W V IY+ +L  F
Sbjct: 948  PTLYRDVAKNALLRWRVFIYWTLLGLF 974


>AL139384-1|CAI16947.1| 1134|Homo sapiens ATPase, Class VI, type 11A
            protein.
          Length = 1134

 Score = 30.7 bits (66), Expect = 6.1
 Identities = 22/87 (25%), Positives = 38/87 (43%)
 Frame = -2

Query: 280  KTITFQVPQIVSQFANWSSRFEIHN*NFQTRYAHKECILIPLLSPSYLRQELRHQTTNIK 101
            K + F  PQ + QF    S+  +++  + T Y +     +P+L  S + Q +        
Sbjct: 889  KNVCFIFPQFLYQFFCGFSQQTLYDTAYLTLY-NISFTSLPILLYSLMEQHVGIDVLKRD 947

Query: 100  TELFTIIKKKGLSVWGVIIYFLILKTF 20
              L+  + K  L  W V IY+ +L  F
Sbjct: 948  PTLYRDVAKNALLRWRVFIYWTLLGLF 974


>AB028944-1|BAA82973.2| 1102|Homo sapiens KIAA1021 protein protein.
          Length = 1102

 Score = 30.7 bits (66), Expect = 6.1
 Identities = 22/87 (25%), Positives = 38/87 (43%)
 Frame = -2

Query: 280  KTITFQVPQIVSQFANWSSRFEIHN*NFQTRYAHKECILIPLLSPSYLRQELRHQTTNIK 101
            K + F  PQ + QF    S+  +++  + T Y +     +P+L  S + Q +        
Sbjct: 857  KNVCFIFPQFLYQFFCGFSQQTLYDTAYLTLY-NISFTSLPILLYSLMEQHVGIDVLKRD 915

Query: 100  TELFTIIKKKGLSVWGVIIYFLILKTF 20
              L+  + K  L  W V IY+ +L  F
Sbjct: 916  PTLYRDVAKNALLRWRVFIYWTLLGLF 942


>AK123032-1|BAC85519.1|  274|Homo sapiens  factor.  protein.
          Length = 274

 Score = 30.3 bits (65), Expect = 8.0
 Identities = 12/42 (28%), Positives = 21/42 (50%), Gaps = 7/42 (16%)
 Frame = +3

Query: 387 IHIRLSMRGCLCFIVSLC-------HYFLCIYYIVYLLVTFF 491
           +H+ + M  C+C  + +C       H FLC++  VY  +  F
Sbjct: 24  VHVGICMHACVCLCMCMCVCACGNLHAFLCVFVSVYTCMGVF 65


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,684,851
Number of Sequences: 237096
Number of extensions: 1629009
Number of successful extensions: 4674
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 4600
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4673
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9367263024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)