Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_F_A21
         (572 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4PEP3 Cluster: Putative uncharacterized protein; n=1; ...    33   3.6  
UniRef50_UPI0000DB6B30 Cluster: PREDICTED: similar to Sloan-Kett...    33   4.8  
UniRef50_Q99296 Cluster: Uncharacterized protein YLR149C; n=3; S...    33   6.3  
UniRef50_Q5CT32 Cluster: Predicted secreted protein; n=2; Crypto...    32   8.3  

>UniRef50_Q4PEP3 Cluster: Putative uncharacterized protein; n=1;
           Ustilago maydis|Rep: Putative uncharacterized protein -
           Ustilago maydis (Smut fungus)
          Length = 281

 Score = 33.5 bits (73), Expect = 3.6
 Identities = 16/54 (29%), Positives = 30/54 (55%)
 Frame = +3

Query: 183 SSPRVHTSNAESEAVRPTMDGLLDSVFIXDVVRVVRSPYEIISLLSVAVAVSDH 344
           +SP +  +   ++AV  +MD  +DS  I D++R +  P   ++L  +AV  + H
Sbjct: 112 TSPEIECAAPHTKAVATSMDEEIDSQEIYDLIRSITDPEHPLTLEQLAVVNASH 165


>UniRef50_UPI0000DB6B30 Cluster: PREDICTED: similar to
           Sloan-Kettering viral oncogene homolog; n=1; Apis
           mellifera|Rep: PREDICTED: similar to Sloan-Kettering
           viral oncogene homolog - Apis mellifera
          Length = 709

 Score = 33.1 bits (72), Expect = 4.8
 Identities = 15/38 (39%), Positives = 26/38 (68%), Gaps = 2/38 (5%)
 Frame = -2

Query: 265 IKTESSNPSIVGRTASDSAFEVCTR--GDDRSLQKYKV 158
           ++TES +PS +G+T  +   +VCT+   D+ S+ K+KV
Sbjct: 231 LRTESCDPSQIGQTQDNIEKKVCTKNDNDEESIVKFKV 268


>UniRef50_Q99296 Cluster: Uncharacterized protein YLR149C; n=3;
           Saccharomycetaceae|Rep: Uncharacterized protein YLR149C
           - Saccharomyces cerevisiae (Baker's yeast)
          Length = 730

 Score = 32.7 bits (71), Expect = 6.3
 Identities = 17/50 (34%), Positives = 27/50 (54%)
 Frame = -3

Query: 261 KRNRAIRPSSDGRPQTRRSRYVHEETIGAYKSTK*SHRGSESTADFRFPP 112
           +R+ +I+PS+ G+  T ++      T G+Y S K  H  SE   +F F P
Sbjct: 85  RRHNSIQPSNSGKNSTEKTSTKGSRTTGSYIS-KNLHVPSEKLVEFNFKP 133


>UniRef50_Q5CT32 Cluster: Predicted secreted protein; n=2;
           Cryptosporidium|Rep: Predicted secreted protein -
           Cryptosporidium parvum Iowa II
          Length = 354

 Score = 32.3 bits (70), Expect = 8.3
 Identities = 16/39 (41%), Positives = 25/39 (64%), Gaps = 2/39 (5%)
 Frame = +3

Query: 138 ILTRDVITLYFCKLRSSPRVH--TSNAESEAVRPTMDGL 248
           ILT   +T  FC L S P+ H  T++++ +A+RP  DG+
Sbjct: 104 ILTWIYLTRAFCTLSSIPKCHFDTNDSDHKALRPDYDGI 142


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 424,715,520
Number of Sequences: 1657284
Number of extensions: 7131501
Number of successful extensions: 16464
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 16144
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16459
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 39154548218
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)