Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_F_A21
         (572 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_02_0366 + 7941550-7942161,7942230-7942775                           28   6.1  
09_02_0445 + 9446171-9447496                                           27   8.0  

>09_02_0366 + 7941550-7942161,7942230-7942775
          Length = 385

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 9/23 (39%), Positives = 18/23 (78%)
 Frame = -1

Query: 497 TKYAFYVCNKTFNLLSRIQLYVY 429
           T+++  VCNKTFN  + +Q++++
Sbjct: 186 TQFSCAVCNKTFNRFNNMQMHMW 208


>09_02_0445 + 9446171-9447496
          Length = 441

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 12/37 (32%), Positives = 22/37 (59%)
 Frame = -2

Query: 244 PSIVGRTASDSAFEVCTRGDDRSLQKYKVITSRVRIY 134
           P+IVG +   S F V   GDD +++  ++I   ++I+
Sbjct: 302 PAIVGESYHPSTFRVIGGGDDGTMRVVRLIGDDLKIF 338


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,410,711
Number of Sequences: 37544
Number of extensions: 196097
Number of successful extensions: 435
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 430
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 435
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1328870592
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)