Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_F_A21
         (572 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z78418-2|CAB01695.1|  817|Caenorhabditis elegans Hypothetical pr...    27   7.2  
Z49966-5|CAA90245.1|  445|Caenorhabditis elegans Hypothetical pr...    27   9.5  

>Z78418-2|CAB01695.1|  817|Caenorhabditis elegans Hypothetical
           protein F25D7.3 protein.
          Length = 817

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 11/22 (50%), Positives = 16/22 (72%)
 Frame = -1

Query: 497 TKYAFYVCNKTFNLLSRIQLYV 432
           T+YA   CNKTF  LS ++++V
Sbjct: 506 TRYACKDCNKTFGQLSNLKVHV 527


>Z49966-5|CAA90245.1|  445|Caenorhabditis elegans Hypothetical
           protein F35C11.5 protein.
          Length = 445

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 18/61 (29%), Positives = 31/61 (50%)
 Frame = -1

Query: 503 KFTKYAFYVCNKTFNLLSRIQLYVYVELAIRLPTINTLMHY*XMSSLQQHGPSVVANCDR 324
           KF    F  CN +F LL+ ++ +++ +  IRL  +N L       S + H P+ +  C R
Sbjct: 44  KFISSIFVCCN-SFLLLNFVESFLFYKKEIRLFFLNNL-------STKNHQPNFLLVCRR 95

Query: 323 Y 321
           +
Sbjct: 96  F 96


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,786,228
Number of Sequences: 27780
Number of extensions: 171393
Number of successful extensions: 387
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 384
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 387
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1184216096
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)