Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P16_F_A19
(787 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ459355-1|ABE69190.1| 166|Drosophila melanogaster Ctr1B protein. 56 4e-08
AY071033-1|AAL48655.1| 174|Drosophila melanogaster RE11491p pro... 56 4e-08
AE014297-737|AAF54223.1| 174|Drosophila melanogaster CG7459-PA ... 56 4e-08
AY128493-1|AAM75086.1| 231|Drosophila melanogaster RH42635p pro... 50 4e-06
AE014298-918|AAF46182.3| 231|Drosophila melanogaster CG3977-PA ... 50 4e-06
AY075311-1|AAL68178.1| 223|Drosophila melanogaster AT31946p pro... 37 0.027
AE014297-4689|AAF57103.1| 270|Drosophila melanogaster CG15551-P... 37 0.027
AE014297-4688|AAO41618.1| 238|Drosophila melanogaster CG15551-P... 37 0.027
AE014296-3356|AAF51592.1| 2284|Drosophila melanogaster CG5847-PA... 32 0.77
AE014297-2619|AAF55629.2| 1542|Drosophila melanogaster CG6026-PA... 31 1.8
AY071278-1|AAL48900.1| 347|Drosophila melanogaster RE30702p pro... 31 2.4
AE014134-1061|AAF52351.2| 471|Drosophila melanogaster CG13990-P... 31 2.4
BT011327-1|AAR96119.1| 891|Drosophila melanogaster SD22390p pro... 30 4.1
BT001340-1|AAN71095.1| 916|Drosophila melanogaster AT22221p pro... 29 5.4
AY095516-1|AAM12250.1| 1084|Drosophila melanogaster GH13857p pro... 29 5.4
AY058253-1|AAL13482.1| 888|Drosophila melanogaster GH01409p pro... 29 5.4
AE014297-2044|AAF55196.2| 888|Drosophila melanogaster CG5166-PA... 29 5.4
AE014297-2043|AAN13664.2| 1023|Drosophila melanogaster CG5166-PC... 29 5.4
AE014297-2042|AAN13663.1| 1084|Drosophila melanogaster CG5166-PB... 29 5.4
Y15594-1|CAA75689.1| 776|Drosophila melanogaster nicotinic acet... 29 7.2
Y15593-1|CAA75688.1| 795|Drosophila melanogaster nicotinic acet... 29 7.2
AE014298-1164|AAF46361.2| 783|Drosophila melanogaster CG2302-PA... 29 7.2
AE014298-2404|AAF48609.1| 511|Drosophila melanogaster CG9968-PB... 29 9.5
AE014298-1976|AAF48332.1| 802|Drosophila melanogaster CG11071-P... 29 9.5
AE014297-4066|AAF56664.3| 979|Drosophila melanogaster CG6124-PA... 29 9.5
>DQ459355-1|ABE69190.1| 166|Drosophila melanogaster Ctr1B protein.
Length = 166
Score = 56.4 bits (130), Expect = 4e-08
Identities = 42/138 (30%), Positives = 65/138 (47%), Gaps = 3/138 (2%)
Frame = +1
Query: 352 LFSGLIISTRWAFALTWIALFFVALLFEGSKVYLAKV-QREAHNKLYPYRSDERRNLLCD 528
L+ G + ST F L+ +A+F V+ L+E K ++ +REA +++RR
Sbjct: 22 LWRGWVASTVTEFVLSALAIFLVSFLYEALKFLRQQLARREARRASEQLAAEQRRKNEAP 81
Query: 529 RERGAMEPTTSRNTTTAQVSRWGLIKVRALVNAH--HSVVFLAHNVVGYLLMLAVMVYNV 702
G + + W R ++H S++ L V+ YLLML M +N
Sbjct: 82 AAGGCCSEAPLAEPR--EQTYWQ----RLFASSHIVQSLLNLLQIVISYLLMLIFMTFNY 135
Query: 703 HLLLAVVFGMMLGYFLFG 756
L LAV+ G+ LGYF FG
Sbjct: 136 WLCLAVILGLGLGYFFFG 153
>AY071033-1|AAL48655.1| 174|Drosophila melanogaster RE11491p
protein.
Length = 174
Score = 56.4 bits (130), Expect = 4e-08
Identities = 42/138 (30%), Positives = 65/138 (47%), Gaps = 3/138 (2%)
Frame = +1
Query: 352 LFSGLIISTRWAFALTWIALFFVALLFEGSKVYLAKV-QREAHNKLYPYRSDERRNLLCD 528
L+ G + ST F L+ +A+F V+ L+E K ++ +REA +++RR
Sbjct: 30 LWRGWVASTVTEFVLSALAIFLVSFLYEALKFLRQQLARREARRASEQLAAEQRRKNEAP 89
Query: 529 RERGAMEPTTSRNTTTAQVSRWGLIKVRALVNAH--HSVVFLAHNVVGYLLMLAVMVYNV 702
G + + W R ++H S++ L V+ YLLML M +N
Sbjct: 90 AAGGCCSEAPLAEPR--EQTYWQ----RLFASSHIVQSLLNLLQIVISYLLMLIFMTFNY 143
Query: 703 HLLLAVVFGMMLGYFLFG 756
L LAV+ G+ LGYF FG
Sbjct: 144 WLCLAVILGLGLGYFFFG 161
>AE014297-737|AAF54223.1| 174|Drosophila melanogaster CG7459-PA
protein.
Length = 174
Score = 56.4 bits (130), Expect = 4e-08
Identities = 42/138 (30%), Positives = 65/138 (47%), Gaps = 3/138 (2%)
Frame = +1
Query: 352 LFSGLIISTRWAFALTWIALFFVALLFEGSKVYLAKV-QREAHNKLYPYRSDERRNLLCD 528
L+ G + ST F L+ +A+F V+ L+E K ++ +REA +++RR
Sbjct: 30 LWRGWVASTVTEFVLSALAIFLVSFLYEALKFLRQQLARREARRASEQLAAEQRRKNEAP 89
Query: 529 RERGAMEPTTSRNTTTAQVSRWGLIKVRALVNAH--HSVVFLAHNVVGYLLMLAVMVYNV 702
G + + W R ++H S++ L V+ YLLML M +N
Sbjct: 90 AAGGCCSEAPLAEPR--EQTYWQ----RLFASSHIVQSLLNLLQIVISYLLMLIFMTFNY 143
Query: 703 HLLLAVVFGMMLGYFLFG 756
L LAV+ G+ LGYF FG
Sbjct: 144 WLCLAVILGLGLGYFFFG 161
>AY128493-1|AAM75086.1| 231|Drosophila melanogaster RH42635p
protein.
Length = 231
Score = 50.0 bits (114), Expect = 4e-06
Identities = 46/149 (30%), Positives = 71/149 (47%), Gaps = 1/149 (0%)
Frame = +1
Query: 310 MHMWMWFGYDLGDFLFSGLIISTRWAFALTWIALFFVALLFEGSKVYLAKVQREAHNKL- 486
M M FGY+ LFS I T + IA+F +AL++EG K Y + + +N L
Sbjct: 79 MPMAFHFGYN-ETILFSWWHIETVAGLIGSMIAIFLLALMYEGLKYYREYLFWKTYNLLE 137
Query: 487 YPYRSDERRNLLCDRERGAMEPTTSRNTTTAQVSRWGLIKVRALVNAHHSVVFLAHNVVG 666
Y + +RN E + + + Q S ++ + L+ +++ + +
Sbjct: 138 YRPVTGPQRN----PEAPRIPSPAAAAPSPVQPS---MLSINHLLQ---TLLHVLQVTLS 187
Query: 667 YLLMLAVMVYNVHLLLAVVFGMMLGYFLF 753
+LLML M YNV L L VV G +GYFLF
Sbjct: 188 FLLMLIFMTYNVWLCLMVVLGAAVGYFLF 216
>AE014298-918|AAF46182.3| 231|Drosophila melanogaster CG3977-PA
protein.
Length = 231
Score = 50.0 bits (114), Expect = 4e-06
Identities = 46/149 (30%), Positives = 71/149 (47%), Gaps = 1/149 (0%)
Frame = +1
Query: 310 MHMWMWFGYDLGDFLFSGLIISTRWAFALTWIALFFVALLFEGSKVYLAKVQREAHNKL- 486
M M FGY+ LFS I T + IA+F +AL++EG K Y + + +N L
Sbjct: 79 MPMAFHFGYN-ETILFSWWHIETVAGLIGSMIAIFLLALMYEGLKYYREYLFWKTYNLLE 137
Query: 487 YPYRSDERRNLLCDRERGAMEPTTSRNTTTAQVSRWGLIKVRALVNAHHSVVFLAHNVVG 666
Y + +RN E + + + Q S ++ + L+ +++ + +
Sbjct: 138 YRPVTGPQRN----PEAPRIPSPAAAAPSPVQPS---MLSINHLLQ---TLLHVLQVTLS 187
Query: 667 YLLMLAVMVYNVHLLLAVVFGMMLGYFLF 753
+LLML M YNV L L VV G +GYFLF
Sbjct: 188 FLLMLIFMTYNVWLCLMVVLGAAVGYFLF 216
>AY075311-1|AAL68178.1| 223|Drosophila melanogaster AT31946p
protein.
Length = 223
Score = 37.1 bits (82), Expect = 0.027
Identities = 16/43 (37%), Positives = 26/43 (60%)
Frame = +1
Query: 658 VVGYLLMLAVMVYNVHLLLAVVFGMMLGYFLFGPKLTRLXMQC 786
++ +LLML M +NV L +AV+ G +GY++F T + C
Sbjct: 180 LISFLLMLVFMTFNVWLCVAVLLGAGVGYYIFCAFRTNVQEHC 222
>AE014297-4689|AAF57103.1| 270|Drosophila melanogaster CG15551-PA,
isoform A protein.
Length = 270
Score = 37.1 bits (82), Expect = 0.027
Identities = 16/43 (37%), Positives = 26/43 (60%)
Frame = +1
Query: 658 VVGYLLMLAVMVYNVHLLLAVVFGMMLGYFLFGPKLTRLXMQC 786
++ +LLML M +NV L +AV+ G +GY++F T + C
Sbjct: 227 LISFLLMLVFMTFNVWLCVAVLLGAGVGYYIFCAFRTNVQEHC 269
>AE014297-4688|AAO41618.1| 238|Drosophila melanogaster CG15551-PB,
isoform B protein.
Length = 238
Score = 37.1 bits (82), Expect = 0.027
Identities = 16/43 (37%), Positives = 26/43 (60%)
Frame = +1
Query: 658 VVGYLLMLAVMVYNVHLLLAVVFGMMLGYFLFGPKLTRLXMQC 786
++ +LLML M +NV L +AV+ G +GY++F T + C
Sbjct: 195 LISFLLMLVFMTFNVWLCVAVLLGAGVGYYIFCAFRTNVQEHC 237
>AE014296-3356|AAF51592.1| 2284|Drosophila melanogaster CG5847-PA
protein.
Length = 2284
Score = 32.3 bits (70), Expect = 0.77
Identities = 20/50 (40%), Positives = 25/50 (50%), Gaps = 8/50 (16%)
Frame = -1
Query: 712 ATDAHCTP---LPPT*AGS-RPRCAPGTRPNGARSP----TPSL*LAPIC 587
+TD C P LPPT + RPRC PG+ G + P TP P+C
Sbjct: 1300 STDPQCQPATYLPPTTVTTVRPRCYPGSNDPGCQPPQTTKTPITTSKPVC 1349
>AE014297-2619|AAF55629.2| 1542|Drosophila melanogaster CG6026-PA
protein.
Length = 1542
Score = 31.1 bits (67), Expect = 1.8
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = -2
Query: 711 QQMHIVHHYRQHEQVADHVVRQEHDRMVRVHQRPHFN*PPS 589
QQ H H +QH+Q +Q+H + HQ+ H PP+
Sbjct: 444 QQHHQQQHQQQHQQQQHQQHQQQHIQQQHQHQQQHQPLPPT 484
>AY071278-1|AAL48900.1| 347|Drosophila melanogaster RE30702p
protein.
Length = 347
Score = 30.7 bits (66), Expect = 2.4
Identities = 18/53 (33%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
Frame = -3
Query: 728 PKTTASNRCTLYTITANMSR*PTTL--CARNTTEWCAFTNALTLISPHLLTCA 576
P+ + CT ++T + PTT CA TT CA T T TCA
Sbjct: 122 PQIITTTTCTPASVTTTTTCAPTTTTTCAPTTTTTCAPTTTTTCAPTTTTTCA 174
>AE014134-1061|AAF52351.2| 471|Drosophila melanogaster CG13990-PA
protein.
Length = 471
Score = 30.7 bits (66), Expect = 2.4
Identities = 18/53 (33%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
Frame = -3
Query: 728 PKTTASNRCTLYTITANMSR*PTTL--CARNTTEWCAFTNALTLISPHLLTCA 576
P+ + CT ++T + PTT CA TT CA T T TCA
Sbjct: 122 PQIITTTTCTPASVTTTTTCAPTTTTTCAPTTTTTCAPTTTTTCAPTTTTTCA 174
>BT011327-1|AAR96119.1| 891|Drosophila melanogaster SD22390p
protein.
Length = 891
Score = 29.9 bits (64), Expect = 4.1
Identities = 19/48 (39%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = +2
Query: 296 EKPLRCTCGCGSVTTSETSCSPV*S-SARGGRSP*PGSRCSLWHSCSK 436
E P +C+C G SE CSPV S + G PG +CS SK
Sbjct: 191 EAPEKCSCNDGYEMDSENRCSPVCSGGCKNGFCVAPG-KCSCNEGYSK 237
Score = 29.9 bits (64), Expect = 4.1
Identities = 19/48 (39%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = +2
Query: 296 EKPLRCTCGCGSVTTSETSCSPV*S-SARGGRSP*PGSRCSLWHSCSK 436
E P +C+C G SE CSPV S + G PG +CS SK
Sbjct: 257 EAPEKCSCNDGYEMDSENRCSPVCSGGCKNGFCVAPG-KCSCDEGYSK 303
Score = 29.9 bits (64), Expect = 4.1
Identities = 19/48 (39%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = +2
Query: 296 EKPLRCTCGCGSVTTSETSCSPV*S-SARGGRSP*PGSRCSLWHSCSK 436
E P +C+C G SE CSPV S + G PG +CS SK
Sbjct: 521 EAPEKCSCNDGYEMDSENRCSPVCSGGCKNGFCVAPG-KCSCDEGYSK 567
Score = 28.7 bits (61), Expect = 9.5
Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = +2
Query: 296 EKPLRCTCGCGSVTTSETSCSPV*S-SARGGRSP*PGSRCSLWHSCSK 436
+ P +C+C G SE CSPV S + G PG +CS SK
Sbjct: 389 DAPEKCSCNDGYEMDSENRCSPVCSGGCKNGFCVAPG-KCSCDEGYSK 435
Score = 28.7 bits (61), Expect = 9.5
Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = +2
Query: 296 EKPLRCTCGCGSVTTSETSCSPV*S-SARGGRSP*PGSRCSLWHSCSK 436
+ P +C+C G SE CSPV S + G PG +CS SK
Sbjct: 455 DAPEKCSCNDGYEMDSENRCSPVCSGGCKNGFCVAPG-KCSCDEGYSK 501
Score = 28.7 bits (61), Expect = 9.5
Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = +2
Query: 296 EKPLRCTCGCGSVTTSETSCSPV*S-SARGGRSP*PGSRCSLWHSCSK 436
+ P +C+C G SE CSPV S + G PG +CS SK
Sbjct: 587 DAPEKCSCNDGYEMDSENRCSPVCSGGCKNGFCVAPG-KCSCDEGYSK 633
Score = 28.7 bits (61), Expect = 9.5
Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = +2
Query: 296 EKPLRCTCGCGSVTTSETSCSPV*S-SARGGRSP*PGSRCSLWHSCSK 436
+ P +C+C G SE CSPV S + G PG +CS SK
Sbjct: 653 DAPEKCSCNDGYEMDSENRCSPVCSGGCKNGFCVAPG-KCSCDEGYSK 699
>BT001340-1|AAN71095.1| 916|Drosophila melanogaster AT22221p
protein.
Length = 916
Score = 29.5 bits (63), Expect = 5.4
Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = -2
Query: 711 QQMHIVHHYRQHEQVADHVVRQEHDRMVRVHQ-RPHFN*PP 592
QQ H+ HH +Q Q +V +H + + HQ +P PP
Sbjct: 523 QQQHVPHHMQQKAQ-QQQLVETQHQHVQKQHQSQPQVQQPP 562
>AY095516-1|AAM12250.1| 1084|Drosophila melanogaster GH13857p
protein.
Length = 1084
Score = 29.5 bits (63), Expect = 5.4
Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = -2
Query: 711 QQMHIVHHYRQHEQVADHVVRQEHDRMVRVHQ-RPHFN*PP 592
QQ H+ HH +Q Q +V +H + + HQ +P PP
Sbjct: 691 QQQHVPHHMQQKAQ-QQQLVETQHQHVQKQHQSQPQVQQPP 730
>AY058253-1|AAL13482.1| 888|Drosophila melanogaster GH01409p
protein.
Length = 888
Score = 29.5 bits (63), Expect = 5.4
Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = -2
Query: 711 QQMHIVHHYRQHEQVADHVVRQEHDRMVRVHQ-RPHFN*PP 592
QQ H+ HH +Q Q +V +H + + HQ +P PP
Sbjct: 630 QQQHVPHHMQQKAQ-QQQLVETQHQHVQKQHQSQPQVQQPP 669
>AE014297-2044|AAF55196.2| 888|Drosophila melanogaster CG5166-PA,
isoform A protein.
Length = 888
Score = 29.5 bits (63), Expect = 5.4
Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = -2
Query: 711 QQMHIVHHYRQHEQVADHVVRQEHDRMVRVHQ-RPHFN*PP 592
QQ H+ HH +Q Q +V +H + + HQ +P PP
Sbjct: 630 QQQHVPHHMQQKAQ-QQQLVETQHQHVQKQHQSQPQVQQPP 669
>AE014297-2043|AAN13664.2| 1023|Drosophila melanogaster CG5166-PC,
isoform C protein.
Length = 1023
Score = 29.5 bits (63), Expect = 5.4
Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = -2
Query: 711 QQMHIVHHYRQHEQVADHVVRQEHDRMVRVHQ-RPHFN*PP 592
QQ H+ HH +Q Q +V +H + + HQ +P PP
Sbjct: 630 QQQHVPHHMQQKAQ-QQQLVETQHQHVQKQHQSQPQVQQPP 669
>AE014297-2042|AAN13663.1| 1084|Drosophila melanogaster CG5166-PB,
isoform B protein.
Length = 1084
Score = 29.5 bits (63), Expect = 5.4
Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = -2
Query: 711 QQMHIVHHYRQHEQVADHVVRQEHDRMVRVHQ-RPHFN*PP 592
QQ H+ HH +Q Q +V +H + + HQ +P PP
Sbjct: 691 QQQHVPHHMQQKAQ-QQQLVETQHQHVQKQHQSQPQVQQPP 730
>Y15594-1|CAA75689.1| 776|Drosophila melanogaster nicotinic
acetylcholine receptoralpha 3 subunit protein.
Length = 776
Score = 29.1 bits (62), Expect = 7.2
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = -2
Query: 711 QQMHIVHHYRQHEQVADHVVRQEHDRMVRVHQRP 610
Q ++HH + H Q H +Q+ + HQRP
Sbjct: 580 QSSELLHHQQLHHQQMHHQQQQQQQQQHHHHQRP 613
>Y15593-1|CAA75688.1| 795|Drosophila melanogaster nicotinic
acetylcholine receptoralpha 3 subunit protein.
Length = 795
Score = 29.1 bits (62), Expect = 7.2
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = -2
Query: 711 QQMHIVHHYRQHEQVADHVVRQEHDRMVRVHQRP 610
Q ++HH + H Q H +Q+ + HQRP
Sbjct: 599 QSSELLHHQQLHHQQMHHQQQQQQQQQHHHHQRP 632
>AE014298-1164|AAF46361.2| 783|Drosophila melanogaster CG2302-PA
protein.
Length = 783
Score = 29.1 bits (62), Expect = 7.2
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = -2
Query: 711 QQMHIVHHYRQHEQVADHVVRQEHDRMVRVHQRP 610
Q ++HH + H Q H +Q+ + HQRP
Sbjct: 587 QSSELLHHQQLHHQQMHHQQQQQQQQQHHHHQRP 620
>AE014298-2404|AAF48609.1| 511|Drosophila melanogaster CG9968-PB,
isoform B protein.
Length = 511
Score = 28.7 bits (61), Expect = 9.5
Identities = 16/50 (32%), Positives = 19/50 (38%)
Frame = +3
Query: 537 RGHGADN*P*HHHSAGQQMGAN*SEGVGERAPFGRVPGAQRGRLPAHVGG 686
+GHG H H G + G +G G G G LPAH G
Sbjct: 145 QGHGHGQGHGHGHGQGHEYGHGYGQGYGHGQGHGNGQGHAHRSLPAHREG 194
>AE014298-1976|AAF48332.1| 802|Drosophila melanogaster CG11071-PA
protein.
Length = 802
Score = 28.7 bits (61), Expect = 9.5
Identities = 11/32 (34%), Positives = 14/32 (43%)
Frame = -2
Query: 735 HHSENDG*QQMHIVHHYRQHEQVADHVVRQEH 640
HH E D H HH+ H Q H + +H
Sbjct: 560 HHLETDPSYPHHHHHHHHHHHQQQHHQAQHQH 591
>AE014297-4066|AAF56664.3| 979|Drosophila melanogaster CG6124-PA
protein.
Length = 979
Score = 28.7 bits (61), Expect = 9.5
Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = +2
Query: 296 EKPLRCTCGCGSVTTSETSCSPV*S-SARGGRSP*PGSRCSLWHSCSK 436
+ P +C+C G SE CSPV S + G PG +CS SK
Sbjct: 440 DAPEKCSCNDGYEMDSENRCSPVCSGGCKNGFCVAPG-KCSCDEGYSK 486
Score = 28.7 bits (61), Expect = 9.5
Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = +2
Query: 296 EKPLRCTCGCGSVTTSETSCSPV*S-SARGGRSP*PGSRCSLWHSCSK 436
+ P +C+C G SE CSPV S + G PG +CS SK
Sbjct: 704 DAPEKCSCNDGYEMDSENRCSPVCSGGCKNGFCVAPG-KCSCDEGYSK 750
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,616,929
Number of Sequences: 53049
Number of extensions: 863421
Number of successful extensions: 4050
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 3338
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3970
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3634208604
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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