Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_F_A15
         (829 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_05_0078 - 18906900-18907082,18907104-18907337,18907429-189076...    31   0.85 
07_01_0463 + 3502708-3503535                                           30   2.6  

>11_05_0078 -
           18906900-18907082,18907104-18907337,18907429-18907653,
           18907739-18907909,18907994-18908109,18908215-18908369,
           18908450-18908573,18909007-18909107,18909215-18909297,
           18909383-18909607,18909694-18909810,18910488-18910640
          Length = 628

 Score = 31.5 bits (68), Expect = 0.85
 Identities = 15/53 (28%), Positives = 26/53 (49%)
 Frame = +1

Query: 670 SATALAKKIRNKELKSEDLVRAVVERIKEVNPIINAIAADRYEAALAEXREVD 828
           S   L + IR K++ S +L    + R+K   PII ++     + A  + +E D
Sbjct: 165 SIIELGELIRTKQVTSRELTAVFLRRLKRYGPIIESVITITDDLAYKQAKEAD 217


>07_01_0463 + 3502708-3503535
          Length = 275

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 17/50 (34%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
 Frame = +1

Query: 613 DKRKKPIPDLESKH--AILKESATALAKKIRNKELKSEDLVRAVVERIKE 756
           +K+KK   D E  +  A LK     +  KI++ + K ED++R + E++KE
Sbjct: 170 EKKKKDKGDKEKTNDPAKLKAKLEKIDTKIQDLQAKKEDILRQLKEQLKE 219


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,191,526
Number of Sequences: 37544
Number of extensions: 313537
Number of successful extensions: 658
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 643
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 658
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2279943096
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)