Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_F_A12
         (822 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    25   0.96 
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    25   0.96 
AY052395-1|AAL15469.1|   76|Tribolium castaneum tryptophan oxyge...    24   1.7  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    23   3.9  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    23   3.9  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    23   3.9  
AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    22   5.1  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    22   5.1  
AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.         22   6.8  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    21   8.9  

>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 24.6 bits (51), Expect = 0.96
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +3

Query: 561 VESEFLTFGTHYIFLVSFRQRIYEIERTRRL 653
           V  E L   TH  + + F+Q IYE++  R +
Sbjct: 48  VHDEHLFIVTHQAYELWFKQIIYELDSIRNI 78


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 24.6 bits (51), Expect = 0.96
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +3

Query: 561 VESEFLTFGTHYIFLVSFRQRIYEIERTRRL 653
           V  E L   TH  + + F+Q IYE++  R +
Sbjct: 48  VHDEHLFIVTHQAYELWFKQIIYELDSIRNI 78


>AY052395-1|AAL15469.1|   76|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 76

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = +3

Query: 561 VESEFLTFGTHYIFLVSFRQRIYEIERTR 647
           V  E L   TH  + + F+Q IYE++  R
Sbjct: 48  VHDEHLFIVTHQAYELWFKQIIYELDSIR 76


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -1

Query: 522 SCCVCPCDLSYV 487
           SC VC CD  Y+
Sbjct: 773 SCTVCTCDAKYL 784


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = -1

Query: 204 INKICPLSRIIEQCVILLHKTFTDCIVL 121
           +NKIC L   + + V L ++TF   ++L
Sbjct: 502 LNKICALHHHLSKLVKLFNETFGIVLLL 529


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = -1

Query: 204 INKICPLSRIIEQCVILLHKTFTDCIVL 121
           +NKIC L   + + V L ++TF   ++L
Sbjct: 227 LNKICALHHHLSKLVKLFNETFGIVLLL 254


>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +1

Query: 688 QGNLK*EFGFHYTENGDKLLHVC 756
           +GNLK   G H  +   ++LH C
Sbjct: 175 KGNLKTHMGVHRAKPPMRVLHQC 197


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 12/39 (30%), Positives = 19/39 (48%)
 Frame = -1

Query: 618 DEMIQEKYNVYQMSRILIQQLYVISNFKLSISSCCVCPC 502
           D ++ EK NV  +   ++  L V  NF   +S   +C C
Sbjct: 238 DTIMYEKTNVTFVHLAVLNILRVGKNFVCLLSLIILCDC 276


>AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.
          Length = 247

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = -3

Query: 79  HQQKAQFQPKNSRCDELTKKKKHRP 5
           +Q +++ QPK  R D+  +   +RP
Sbjct: 211 NQSRSKRQPKTGREDQTRRNPYYRP 235


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 9/31 (29%), Positives = 19/31 (61%)
 Frame = +2

Query: 65  GFLLV*QIDTS*SKWRSIRSTMQSVKVLCNN 157
           GF++   +DT  SK+R +   + + KV+ ++
Sbjct: 143 GFMIYLILDTIKSKYRQMHRLLANYKVITSD 173


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 206,566
Number of Sequences: 336
Number of extensions: 4628
Number of successful extensions: 14
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22517873
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)