Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_F_A01
         (791 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   4.9  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    22   6.5  
DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.      22   6.5  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    22   6.5  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 7/25 (28%), Positives = 14/25 (56%)
 Frame = -2

Query: 325 FSILLFYYFCVTLLFVPL*FFSECI 251
           F + ++Y++C  ++F     F  CI
Sbjct: 142 FLLCIYYFYCAFIIFTVHLLFLLCI 166



 Score = 22.2 bits (45), Expect = 4.9
 Identities = 5/27 (18%), Positives = 16/27 (59%)
 Frame = -2

Query: 325 FSILLFYYFCVTLLFVPL*FFSECIIL 245
           F + ++Y++C  ++ + + +F    I+
Sbjct: 281 FLLCIYYFYCALIILLCIYYFCRAFII 307



 Score = 21.4 bits (43), Expect = 8.5
 Identities = 7/19 (36%), Positives = 10/19 (52%)
 Frame = -2

Query: 319 ILLFYYFCVTLLFVPL*FF 263
           +L  YYFC   +  P  F+
Sbjct: 295 LLCIYYFCRAFIIFPTHFY 313


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 9/36 (25%), Positives = 17/36 (47%)
 Frame = -2

Query: 583 EHSTIWPLPDITSFCLANILKAPSFDVK*TIISSEN 476
           ++  +WP P   +   + +LK P   +K  I   +N
Sbjct: 67  KYGALWPQPTSVTKISSTLLKFPYRSIKFNIPDEKN 102


>DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.
          Length = 162

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 9/32 (28%), Positives = 14/32 (43%)
 Frame = +3

Query: 552 ISGKGQIVECSSAYLREIDKFEGCFPKQCKRF 647
           +SG     EC    +  + ++ GC PK    F
Sbjct: 32  VSGASTTDECQVTPVIHVLQYPGCVPKPIPSF 63


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 9/37 (24%), Positives = 18/37 (48%)
 Frame = -1

Query: 704 FCNHE*FVDFFICNNFISDEPLALLRETSFEFINFPQ 594
           + N+E   D+++C       PL ++   + E  N P+
Sbjct: 128 YINYE--TDYYVCLAMTITGPLVIIGNIAMELWNMPR 162


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,078
Number of Sequences: 336
Number of extensions: 2692
Number of successful extensions: 12
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21480183
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)