Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_pT_P14
         (657 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U10414-5|AAU05572.1|  156|Caenorhabditis elegans Hypothetical pr...   105   4e-23
AC006733-9|AAF60491.2| 3901|Caenorhabditis elegans Hypothetical ...    28   5.1  
Z83319-1|CAB05908.1|  322|Caenorhabditis elegans Hypothetical pr...    28   6.7  
AF067217-2|AAF99977.1| 1887|Caenorhabditis elegans Heavy chain, ...    28   6.7  

>U10414-5|AAU05572.1|  156|Caenorhabditis elegans Hypothetical
           protein F42A10.9 protein.
          Length = 156

 Score =  105 bits (251), Expect = 4e-23
 Identities = 55/130 (42%), Positives = 78/130 (60%), Gaps = 2/130 (1%)
 Frame = -1

Query: 648 EPNHGTMTNPENGVATFIAEGMTKEKYPLIIATKYNVPFLLHSPGTGYNVKGEIYEVDDK 469
           EPN+  ++  + G   FI+ G T EK+PL++ TKYN+PFLL   G G N++GE+YEV +K
Sbjct: 17  EPNYKVLSETD-GEYRFISSGTTVEKFPLVVGTKYNIPFLLDDAGNGNNIEGEMYEVCEK 75

Query: 468 MLSNLDILEDHPNCYIRDKNDIVLTDSTHRTVMKCWVYFLKMFKPELL--SKPFLEDYKS 295
            L  LD LE +P  Y R K +I L   T  T    ++Y LK ++P+LL  S   + +Y S
Sbjct: 76  KLKVLDELEAYPTLYDRKKVEIKLPSGTTET---AFIYLLKSWRPDLLSTSSEMMTNYSS 132

Query: 294 EGDHGLRYCE 265
            G HG  Y +
Sbjct: 133 LGAHGRPYVD 142


>AC006733-9|AAF60491.2| 3901|Caenorhabditis elegans Hypothetical
            protein Y32H12A.8 protein.
          Length = 3901

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 16/53 (30%), Positives = 26/53 (49%)
 Frame = -1

Query: 405  IVLTDSTHRTVMKCWVYFLKMFKPELLSKPFLEDYKSEGDHGLRYCERCKRDV 247
            +  T+  + T MK  +  LK+  PE+ S+   ED+  E +     C +CK  V
Sbjct: 1746 VKFTEQDYDTSMKAALENLKLEAPEMSSESDFEDFVREQE----VCRKCKHQV 1794


>Z83319-1|CAB05908.1|  322|Caenorhabditis elegans Hypothetical
           protein T02D1.3 protein.
          Length = 322

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 10/47 (21%)
 Frame = +2

Query: 488 ISPFTLYPVPGLCNRNGTLY-----FVAMINGYF-----SFVIPSAI 598
           I  FTL P  GLC +   LY     +V  IN +F     +F++P+AI
Sbjct: 166 IFTFTLNPALGLCRQYNVLYQFGHIYVFFINNWFNVKLDNFLVPNAI 212


>AF067217-2|AAF99977.1| 1887|Caenorhabditis elegans Heavy chain,
            unconventional myosinprotein 7 protein.
          Length = 1887

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 12/39 (30%), Positives = 21/39 (53%)
 Frame = -1

Query: 426  YIRDKNDIVLTDSTHRTVMKCWVYFLKMFKPELLSKPFL 310
            ++RD   ++L D  HRT+M+      + F+  L  K +L
Sbjct: 941  FMRDAEKLILDDHLHRTIMQSIDTLQRWFRTMLARKRYL 979


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,265,226
Number of Sequences: 27780
Number of extensions: 260210
Number of successful extensions: 706
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 701
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 706
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1465835342
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)