Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_pT_P14
         (657 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    26   0.36 
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    26   0.36 
AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     23   3.4  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              21   7.8  

>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 25.8 bits (54), Expect = 0.36
 Identities = 16/61 (26%), Positives = 25/61 (40%)
 Frame = -1

Query: 621 PENGVATFIAEGMTKEKYPLIIATKYNVPFLLHSPGTGYNVKGEIYEVDDKMLSNLDILE 442
           PE+ + TF+          L   + Y     LH       +  E +E D K+  NL++L 
Sbjct: 304 PESDLVTFLCYPSVMNLDDLTRRSLYLSDIPLHDATRDLVLMSEQFEADYKLTRNLELLT 363

Query: 441 D 439
           D
Sbjct: 364 D 364


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 25.8 bits (54), Expect = 0.36
 Identities = 16/61 (26%), Positives = 25/61 (40%)
 Frame = -1

Query: 621 PENGVATFIAEGMTKEKYPLIIATKYNVPFLLHSPGTGYNVKGEIYEVDDKMLSNLDILE 442
           PE+ + TF+          L   + Y     LH       +  E +E D K+  NL++L 
Sbjct: 304 PESDLVTFLCYPSVMNLDDLTRRSLYLSDIPLHDATRDLVLMSEQFEADYKLTRNLELLT 363

Query: 441 D 439
           D
Sbjct: 364 D 364


>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.
          Length = 602

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = -1

Query: 543 NVPFLLHSPGTGYNVKGEIYEVDDKMLSNLDI 448
           NV  +L    T YN+   + ++D   L++LDI
Sbjct: 505 NVTNILSMDNTQYNLDLSLPQLDSTELADLDI 536


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +1

Query: 1    IHQIKQYYNYSIGLXVF 51
            +H +K+Y NYS+ +  F
Sbjct: 1143 LHGLKKYTNYSMQVLAF 1159


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,947
Number of Sequences: 438
Number of extensions: 3266
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 19734030
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)