Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P15_pT_P09
(769 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC16A11.09c |tim23||mitochondrial inner membrane presequence t... 35 0.011
SPAC1783.01 |||FAD binding protein|Schizosaccharomyces pombe|chr... 30 0.32
SPBC342.03 |||1,3-beta-glucanosyltransferase |Schizosaccharomyce... 27 2.2
SPBC83.13 |||mitochondrial tricarboxylic acid transporter|Schizo... 27 3.0
SPBC25H2.04c |tim22||TIM22 inner membrane protein import complex... 27 3.0
SPAC11E3.12 |||conserved eukaryotic protein|Schizosaccharomyces ... 26 5.2
SPBC354.08c |||DUF221 family protein|Schizosaccharomyces pombe|c... 26 6.8
SPBP4H10.16c |||phosphatase activator |Schizosaccharomyces pombe... 25 9.0
SPCC417.09c |||transcription factor |Schizosaccharomyces pombe|c... 25 9.0
SPCC594.01 ||SPCC736.16|DUF1769 family protein|Schizosaccharomyc... 25 9.0
>SPCC16A11.09c |tim23||mitochondrial inner membrane presequence
translocase complex subunit Tim23|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 210
Score = 35.1 bits (77), Expect = 0.011
Identities = 17/26 (65%), Positives = 19/26 (73%)
Frame = -2
Query: 456 AGALTGALYKANLGLTAMIVGGSLGA 379
AGALTGALYK+ GL AM + SL A
Sbjct: 167 AGALTGALYKSTRGLRAMAISSSLVA 192
>SPAC1783.01 |||FAD binding protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 583
Score = 30.3 bits (65), Expect = 0.32
Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
Frame = +2
Query: 329 VIFNIPIIKSPPI--VLNTAPREP--PTIIAVNPKFALYNAPVSAPAVVYSMSVVSPRY 493
V IP I +PP+ V++ +P P P+ + +P + ++ AP+ V+ + V Y
Sbjct: 127 VSLGIPSISNPPVDTVISDSPTSPHPPSFVQPHPPYGIFAAPILDVRVLTNPGAVKRTY 185
>SPBC342.03 |||1,3-beta-glucanosyltransferase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 456
Score = 27.5 bits (58), Expect = 2.2
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +2
Query: 677 DETNPPKQTPTNAPHNVDCTTVCSSGETS 763
DE+ + P N P NV TT +SG TS
Sbjct: 400 DESTSRRPKPKNKPSNVTSTTSYTSGMTS 428
>SPBC83.13 |||mitochondrial tricarboxylic acid
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 293
Score = 27.1 bits (57), Expect = 3.0
Identities = 14/48 (29%), Positives = 21/48 (43%)
Frame = -2
Query: 582 IGFAKGAYKWGWKLSIFTGMFSLIATTISAYRGDTTLIEYTTAGALTG 439
+GF +G W W + G L + Y G + T+AGA+ G
Sbjct: 61 LGFYQGLIPWAWIEASTKGAVLLFTSAELEYWGRRLGLGATSAGAIAG 108
>SPBC25H2.04c |tim22||TIM22 inner membrane protein import complex
subunit Tim22|Schizosaccharomyces pombe|chr 2|||Manual
Length = 175
Score = 27.1 bits (57), Expect = 3.0
Identities = 12/38 (31%), Positives = 18/38 (47%)
Frame = -2
Query: 501 ISAYRGDTTLIEYTTAGALTGALYKANLGLTAMIVGGS 388
I A+R T + AG TG G A+++GG+
Sbjct: 121 IEAFRAKTDIYNAIAAGVFTGGALAVRSGPKAIVLGGA 158
>SPAC11E3.12 |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 162
Score = 26.2 bits (55), Expect = 5.2
Identities = 7/18 (38%), Positives = 13/18 (72%)
Frame = -1
Query: 610 KEKTARLCNNWICQRCLQ 557
K+ R+CN+W+CQ+ +
Sbjct: 81 KKPRVRICNSWMCQQAAE 98
>SPBC354.08c |||DUF221 family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 865
Score = 25.8 bits (54), Expect = 6.8
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = -2
Query: 324 VRMSDIRQALYKIKESRTDHYNQAIEKSSKIKHDDLTRHHDTI 196
+R+ R++LY E+ +HY KSS I H D RH+ +
Sbjct: 302 LRVDAARESLY---ENEFEHYGFITYKSSYIAH-DTARHNSRV 340
>SPBP4H10.16c |||phosphatase activator |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 295
Score = 25.4 bits (53), Expect = 9.0
Identities = 9/25 (36%), Positives = 12/25 (48%)
Frame = -1
Query: 400 CWWFPRSCIKYNRWTFNYWNIKNYW 326
CWW + I YN F W ++ W
Sbjct: 255 CWWDSSTSITYNGIEFATW-VRRVW 278
>SPCC417.09c |||transcription factor |Schizosaccharomyces pombe|chr
3|||Manual
Length = 767
Score = 25.4 bits (53), Expect = 9.0
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = -1
Query: 613 CKEKTARLCNNWICQRCLQVGME 545
CK+ + N+ C RCL+ G+E
Sbjct: 120 CKKHKIKCVGNFPCGRCLKKGLE 142
>SPCC594.01 ||SPCC736.16|DUF1769 family protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 791
Score = 25.4 bits (53), Expect = 9.0
Identities = 13/30 (43%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
Frame = +2
Query: 677 DETNPPKQTPTNAPHNVDCTTVCS-SGETS 763
D NPP TP N D + V S SG T+
Sbjct: 214 DSPNPPAATPATVADNDDLSIVSSDSGNTT 243
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,981,728
Number of Sequences: 5004
Number of extensions: 60642
Number of successful extensions: 180
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 173
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 180
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 369323696
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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