Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_pT_P09
         (769 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY496421-1|AAS80138.1|  439|Anopheles gambiae bacteria responsiv...    27   0.84 
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    25   1.9  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         25   3.4  

>AY496421-1|AAS80138.1|  439|Anopheles gambiae bacteria responsive
           protein 2 protein.
          Length = 439

 Score = 26.6 bits (56), Expect = 0.84
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = +3

Query: 489 DMQILLWLSN*TFL*KYLISIPTCRHLWQI 578
           D Q+ LWL+N     K ++SIPT    W++
Sbjct: 276 DGQVRLWLTNNAPASKLIVSIPTFGRGWKM 305


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 25.4 bits (53), Expect = 1.9
 Identities = 14/46 (30%), Positives = 22/46 (47%)
 Frame = +2

Query: 326 PVIFNIPIIKSPPIVLNTAPREPPTIIAVNPKFALYNAPVSAPAVV 463
           P +   P + +P  V +   R  PT++A +P      APV   +VV
Sbjct: 54  PTVLGGPNLFAPSAVSSQLQRPQPTVLAASPAPQPSLAPVVPSSVV 99


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 24.6 bits (51), Expect = 3.4
 Identities = 13/38 (34%), Positives = 22/38 (57%)
 Frame = -2

Query: 279  SRTDHYNQAIEKSSKIKHDDLTRHHDTIVQEQGEVKIE 166
            S TD+ N + +K    ++  +T+  DT+V   G +KIE
Sbjct: 1364 SGTDNANDSGDKPGS-RNRTITQSQDTVVNLGGRLKIE 1400


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 756,983
Number of Sequences: 2352
Number of extensions: 15228
Number of successful extensions: 27
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 79834176
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)