Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P15_pT_P07
(770 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC23D3.07 |pup1||20S proteasome component beta 2|Schizosacchar... 256 2e-69
SPBC4C3.10c |||20S proteasome component beta 1|Schizosaccharomyc... 118 1e-27
SPAC4A8.13c |pts1||20S proteasome component beta 5|Schizosacchar... 78 1e-15
SPAC323.02c |||20S proteasome component alpha 5|Schizosaccharomy... 62 6e-11
SPAC13C5.01c ||SPAC31A2.17c|20S proteasome component alpha 3|Sch... 52 1e-07
SPCC1442.06 |||20S proteasome component alpha 2|Schizosaccharomy... 39 0.001
SPAC22F8.06 |pam1||20S proteasome component beta 6|Schizosacchar... 36 0.008
SPCC1795.04c |||20S proteasome component alpha 7|Schizosaccharom... 31 0.18
SPAC6G10.04c |||20S proteasome component alpha 6 subunit Pre5|Sc... 30 0.32
SPBC28E12.06c |lvs1|SPBC3H7.16|beige protein homolog|Schizosacch... 27 2.2
SPBC56F2.04 |utp20||U3 snoRNP protein Utp20|Schizosaccharomyces ... 26 5.2
SPAP27G11.14c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 26 6.9
SPAC1039.11c ||SPAC922.02c|alpha-glucosidase|Schizosaccharomyces... 25 9.1
>SPAC23D3.07 |pup1||20S proteasome component beta
2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 267
Score = 256 bits (628), Expect = 2e-69
Identities = 123/224 (54%), Positives = 156/224 (69%)
Frame = -2
Query: 766 PKATKTGXTIVGIIYADGVIXGADTRATENTVVSDKNCQKIHYLASNMYCCGAGTAADTE 587
PKAT TG TIVG+I D ++ GADTRAT +++DKNC+K+H ++ N++C GAGTAADTE
Sbjct: 29 PKATSTGTTIVGVIAKDCIVLGADTRATAGPIIADKNCKKLHLISPNIWCAGAGTAADTE 88
Query: 586 MTTQSVASQLELQRLHTGRTVPVETAATLLKRMLFRYQGHIGAALVLGGVDRTGPHIYCI 407
T ++S +EL L+T R V TA T+LK+ LFRYQGHIGA LVLGG D GPH++ I
Sbjct: 89 FVTSMISSNIELHSLYTNRKPRVVTALTMLKQHLFRYQGHIGAYLVLGGYDCKGPHLFTI 148
Query: 406 YPHGSVDKLPYATMGSGSLAAMAVFEAGWKRDMNEEEGKKLVRDAIAAGIFNDLGSGSNV 227
HGS DKLPY +GSGSLAA++V E ++ D+ E +LV++AI AGIFNDLGSGSN
Sbjct: 149 AAHGSSDKLPYVALGSGSLAAISVLETKYQPDLERHEAMELVKEAIEAGIFNDLGSGSNC 208
Query: 226 DLCVIRNTGPAQYLRTYEEANVKGKKQGSYRYALGTTAVLKQRV 95
DL VI Y R Y + N + KQ Y Y GTTAVLK+ +
Sbjct: 209 DLVVIDEEKATPY-RGYSKPNERATKQSKYTYDRGTTAVLKEDI 251
>SPBC4C3.10c |||20S proteasome component beta 1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 226
Score = 118 bits (283), Expect = 1e-27
Identities = 61/198 (30%), Positives = 103/198 (52%), Gaps = 1/198 (0%)
Frame = -2
Query: 754 KTGXTIVGIIYADGVIXGADTRATENTVVSDKNCQKIHYLASNMYCCGAGTAADTEMTTQ 575
+ G TI + Y DGVI AD+R T ++++ K+ L N++CC +G+AADT+
Sbjct: 22 RMGTTITALRYKDGVILAADSRTTMGAYIANRVTDKLTQLTDNIWCCRSGSAADTQTVAD 81
Query: 574 SVASQLELQRLHTGRTVPVETAATLLKRMLFRYQGHIGAALVLGGVD-RTGPHIYCIYPH 398
+ L + R+ G V TAATL M ++ + + A L++ G D +TG +Y I
Sbjct: 82 LLKYYLSMYRIQFGHDPSVHTAATLASEMCYQNKNMLSAGLIVAGYDEKTGGDVYSIPLG 141
Query: 397 GSVDKLPYATMGSGSLAAMAVFEAGWKRDMNEEEGKKLVRDAIAAGIFNDLGSGSNVDLC 218
GS+ K P A GSGS +A ++ +M +EE + +++A+A + D SG + +
Sbjct: 142 GSLHKQPLAIGGSGSAFIYGFCDANFRENMTQEEAVEFLKNAVALAMERDGSSGGTIRMV 201
Query: 217 VIRNTGPAQYLRTYEEAN 164
++ G + + AN
Sbjct: 202 ILNKDGMERKFFAIDTAN 219
>SPAC4A8.13c |pts1||20S proteasome component beta
5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 272
Score = 78.2 bits (184), Expect = 1e-15
Identities = 49/186 (26%), Positives = 91/186 (48%), Gaps = 3/186 (1%)
Frame = -2
Query: 748 GXTIVGIIYADGVIXGADTRATENTVVSDKNCQKIHYLASNMYCCG--AGTAADTEMTTQ 575
G T + Y G++ D+RA+ +++ + +K+ + N Y G AG AAD +
Sbjct: 61 GTTTLAFRYQHGIVVCVDSRASAGPLIASQTVKKV--IEINPYLLGTLAGGAADCQFWET 118
Query: 574 SVASQLELQRLHTGRTVPVETAATLLKRMLFRYQGH-IGAALVLGGVDRTGPHIYCIYPH 398
+ + L +L + V A+ +L + + Y+G+ + +L G + G +Y I
Sbjct: 119 VLGMECRLHQLRNKELISVSAASKILSNITYSYKGYGLSMGTMLAGTGKGGTALYYIDSD 178
Query: 397 GSVDKLPYATMGSGSLAAMAVFEAGWKRDMNEEEGKKLVRDAIAAGIFNDLGSGSNVDLC 218
G+ K ++GSGS A V ++G++ D++++E L + +I A D SG +V+L
Sbjct: 179 GTRLKGDLFSVGSGSTFAYGVLDSGYRWDLSKQEALYLAQRSIVAATHRDAYSGGSVNLY 238
Query: 217 VIRNTG 200
I G
Sbjct: 239 HIDENG 244
>SPAC323.02c |||20S proteasome component alpha 5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 247
Score = 62.5 bits (145), Expect = 6e-11
Identities = 51/219 (23%), Positives = 92/219 (42%), Gaps = 11/219 (5%)
Frame = -2
Query: 769 APKATKTGXTIVGIIYADGVIXGADTRATENTVVSDKNCQKIHYLASNMYCCGAGTAADT 590
A +A K G T +G+ D V+ G + R T + ++ + +K+ + S++ C +G AD
Sbjct: 27 AIEAIKLGSTAIGVKTKDAVVLGVEKRLT-SPLMESHSVEKLFEIDSHIGCAISGLTADA 85
Query: 589 EMTTQSVASQLELQRLHTGRTVPVETAATLLKRMLFRY-QGH----------IGAALVLG 443
+ Q + R +E+ + + R+ +G G AL++
Sbjct: 86 RTIIEHARVQTQNHRFTYDEPQGIESTTQSICDLALRFGEGEDGEERIMSRPFGVALLIA 145
Query: 442 GVDRTGPHIYCIYPHGSVDKLPYATMGSGSLAAMAVFEAGWKRDMNEEEGKKLVRDAIAA 263
G+D GP +Y P G+ + +GSGS A + + +DM EE + L+ +
Sbjct: 146 GIDEHGPQLYHSEPSGTYFRYEAKAIGSGSEPAKSELVKEFHKDMTLEEAEVLILKVLRQ 205
Query: 262 GIFNDLGSGSNVDLCVIRNTGPAQYLRTYEEANVKGKKQ 146
+ L S NV L + G E A+ ++Q
Sbjct: 206 VMEEKLDS-KNVQLAKVTAEGGFHIYNDEEMADAVAREQ 243
>SPAC13C5.01c ||SPAC31A2.17c|20S proteasome component alpha
3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 248
Score = 51.6 bits (118), Expect = 1e-07
Identities = 38/169 (22%), Positives = 75/169 (44%), Gaps = 7/169 (4%)
Frame = -2
Query: 769 APKATKTGXTIVGIIYADGVIXGADTRATENTVVSDKNCQKIHYLASNMYCCGAGTAADT 590
A +A +GI+ DG++ A+ + T + +++ +K++++ NM C AG AD
Sbjct: 24 ALEAINHAGVALGIVAKDGIVLAAEKKVTSKLLEQEESAEKLYHIGDNMLCAVAGLTADA 83
Query: 589 EMTTQSVASQLELQRLHT-GRTVPVETAATL---LKRMLFRYQG--HIGAALVLGGVDR- 431
+ + A ++ Q L T +P E LK+ +Y G G + + G D
Sbjct: 84 NILI-NYARRVGQQYLQTFNEEMPCEQLVRRVCDLKQGYTQYGGLRPFGVSFLYAGWDHI 142
Query: 430 TGPHIYCIYPHGSVDKLPYATMGSGSLAAMAVFEAGWKRDMNEEEGKKL 284
G ++ P G+ ++G S + ++ +K D+N +E +
Sbjct: 143 RGYQLFQSNPSGNYGSWQANSIGGNSTSVQSLMRQEYKDDINLDEASAM 191
>SPCC1442.06 |||20S proteasome component alpha 2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 245
Score = 38.7 bits (86), Expect = 0.001
Identities = 42/194 (21%), Positives = 78/194 (40%), Gaps = 8/194 (4%)
Frame = -2
Query: 769 APKATKTGXTIVGIIYADGVIXGADTRATENTVVSDKNCQKIHYLASNMYCCGAGTAADT 590
A A G T VGI DGV+ + + T + + +K+ + ++ +G D
Sbjct: 24 ALNAVNAGVTSVGIKATDGVVLATEKKPTSELAIG-ASLEKVCAITPDIGMVYSGMGPDF 82
Query: 589 EMTTQSV--ASQLELQRLHTG----RTVPVETAATLLKRMLFRYQGHIGAALVLGGVDRT 428
+ +Q ++++ + + E A+ + + G +L++ G+D
Sbjct: 83 RVLVDKSRKVAQTTYKKIYNEYPPTKILVQEIASVMQESTQSGGVRPFGVSLLVAGMDEK 142
Query: 427 GPHIYCIYPHGSVDKLPYATMGSGSLAAMAVFEAGWKRDMNEEEGKKLVRDAIAA--GIF 254
GP +Y + P G+ +G S AA E KR +E E V AI A F
Sbjct: 143 GPSLYQVDPSGTYFAWKATAIGKSSTAAKTFLE---KRYNDELELDDAVHTAILALKETF 199
Query: 253 NDLGSGSNVDLCVI 212
+ N+++ V+
Sbjct: 200 EGELTEDNIEIAVV 213
>SPAC22F8.06 |pam1||20S proteasome component beta
6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 225
Score = 35.5 bits (78), Expect = 0.008
Identities = 25/127 (19%), Positives = 57/127 (44%), Gaps = 3/127 (2%)
Frame = -2
Query: 754 KTGXTIVGIIYADGVIXGADTRATENTVVSDKNCQKIHYLASNMYCCGAGTAADTEMTTQ 575
+ G T V I I DTR+ ++ + ++H + ++ +G AD +
Sbjct: 11 QNGGTTVAIAGDGFAILAGDTRSVNGYNINTRFQPRVHEVGDDLVIGASGFEADALALVK 70
Query: 574 SVASQLELQRLHTGRTVPVETAATLLKRMLF--RYQGHIGAALVLGGVDRTGP-HIYCIY 404
+ +++L + R + ++ A +++ +L+ R+ + + G+D+ G IY
Sbjct: 71 RIQQRIDLYHDNHERKMSAQSCACMVRTLLYGKRFFPYY-VYTTVAGIDKEGKGEIYSFD 129
Query: 403 PHGSVDK 383
P GS ++
Sbjct: 130 PVGSYER 136
>SPCC1795.04c |||20S proteasome component alpha
7|Schizosaccharomyces pombe|chr 3|||Manual
Length = 253
Score = 31.1 bits (67), Expect = 0.18
Identities = 34/147 (23%), Positives = 52/147 (35%), Gaps = 5/147 (3%)
Frame = -2
Query: 769 APKATKTGXTIVGIIYADGVIXGADTRATENTVVSDKNCQKIHYLASNMYCCGAGTAADT 590
A KA + T +GI DGVI + T + N +I + ++ G D
Sbjct: 26 AYKAVENASTCIGIKCEDGVILALEKVVTSKLLKPRVN-NRIGSVDRHIGIATTGFIPDG 84
Query: 589 EMTTQSVASQLELQRLHTGRTVPVETAATLLKR--MLFRYQGHI---GAALVLGGVDRTG 425
+ + + R + G +P A L LF + G + D G
Sbjct: 85 QHIVKRARDEATSWRDNYGSPIPGTVIADRLGNYVQLFTCYSSVRPFGVMSFVATYDSEG 144
Query: 424 PHIYCIYPHGSVDKLPYATMGSGSLAA 344
PH+Y + P+G A G G A
Sbjct: 145 PHLYMVEPNGVYWGYNGAAAGKGRQVA 171
>SPAC6G10.04c |||20S proteasome component alpha 6 subunit
Pre5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 272
Score = 30.3 bits (65), Expect = 0.32
Identities = 34/152 (22%), Positives = 60/152 (39%), Gaps = 5/152 (3%)
Frame = -2
Query: 769 APKATKTGXTIVGIIYADGVIXGADTRATENTVVSDKNCQKIHYLASNMYCCGAGTAADT 590
A +A K G VG++ + A R E K K+ + ++ AG A D
Sbjct: 25 ALEAIKQGSATVGLVSKTHAVLVALKRNAEELSSYQK---KLIRIDDHIGIAIAGLAPDA 81
Query: 589 EMTTQSVASQLELQRLHTGRTVPVETAAT-LLKRMLFRYQGH----IGAALVLGGVDRTG 425
+ + + + + R +PV + + ++ Q + G ++ G D +G
Sbjct: 82 RVLSNYMKQEALSSKTLFTRPIPVRRLMSKVAEKAQINTQEYGRRPYGVGFLVIGYDESG 141
Query: 424 PHIYCIYPHGSVDKLPYATMGSGSLAAMAVFE 329
PH+ P G V + +MGS S +A E
Sbjct: 142 PHLLEFQPSGLVLEYLGTSMGSRSQSARTYIE 173
>SPBC28E12.06c |lvs1|SPBC3H7.16|beige protein
homolog|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2609
Score = 27.5 bits (58), Expect = 2.2
Identities = 29/105 (27%), Positives = 44/105 (41%)
Frame = -2
Query: 514 TAATLLKRMLFRYQGHIGAALVLGGVDRTGPHIYCIYPHGSVDKLPYATMGSGSLAAMAV 335
T T+ K G G L++ ++R SV KLP T+ + A
Sbjct: 2346 TCVTVCKAFSIIVSGDAGGNLIIWDLNRAE-----FVSSLSVYKLPIQTIAVNARNAEIA 2400
Query: 334 FEAGWKRDMNEEEGKKLVRDAIAAGIFNDLGSGSNVDLCVIRNTG 200
F G+ + GK LV+D ++ I+N+ S N+ LC TG
Sbjct: 2401 FSTGFYCCVVNVNGKILVKDKLSR-IYNE-NSDENI-LCSCFYTG 2442
>SPBC56F2.04 |utp20||U3 snoRNP protein Utp20|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 2493
Score = 26.2 bits (55), Expect = 5.2
Identities = 25/103 (24%), Positives = 50/103 (48%), Gaps = 3/103 (2%)
Frame = +2
Query: 59 WAXQNRFY--LERYYTLLKHSSCTKSISIRTLLFPLHISFFISS*ILGRASVTNNAQVNV 232
WA N++ L+RY +LLK+++ + + +R + + + + AS TN+
Sbjct: 1525 WAHWNQYQAILKRYVSLLKNNAIDQKVVVRLITAVVSALRPLDDAV---ASYTNSEMNIE 1581
Query: 233 RT*TQVIEYTSSNSI-SDKLFSFFLIHITFPTCFKHCHSRKRS 358
+ Q + ++S+ S++ F+ L + FPT + H R S
Sbjct: 1582 QFDGQKKKCVLASSLPSEERFTEVLTNDFFPTLMLYLHIRDES 1624
>SPAP27G11.14c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 689
Score = 25.8 bits (54), Expect = 6.9
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = -2
Query: 178 YEEANVKGKKQGSYRYALGTTAVLKQRVIPLEVESILXRP 59
YE NV+ K+ +Y++ V+ ++I E SIL P
Sbjct: 334 YETINVEETKKETYKFTRSIKTVIPNKLISNESISILSIP 373
>SPAC1039.11c ||SPAC922.02c|alpha-glucosidase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 995
Score = 25.4 bits (53), Expect = 9.1
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = +2
Query: 407 NAVNMRTGSVNTSQNQSSPYMALIAK*HSFQQCGSSF 517
N + M+ S+ T + + +PY L+A + CGS +
Sbjct: 861 NIIPMQKPSLTTHETKQNPYDLLVALDSDRKACGSLY 897
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,064,029
Number of Sequences: 5004
Number of extensions: 61408
Number of successful extensions: 147
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 137
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 143
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 371330890
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -