Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_pT_P06
         (582 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X69392-1|CAA49189.1|  145|Homo sapiens ribosomal protein L26 pro...   220   3e-57
CR456828-1|CAG33109.1|  145|Homo sapiens RPL26 protein.               220   3e-57
BC071664-1|AAH71664.1|  145|Homo sapiens RPL26 protein protein.       220   3e-57
AB061829-1|BAB79467.1|  145|Homo sapiens ribosomal protein L26 p...   220   3e-57
BC070192-1|AAH70192.1|  145|Homo sapiens ribosomal protein L26-l...   219   4e-57
BC017360-1|AAH17360.1|  145|Homo sapiens ribosomal protein L26-l...   219   4e-57
L07287-1|AAA60279.1|  145|Homo sapiens ribosomal protein L26 pro...   218   1e-56

>X69392-1|CAA49189.1|  145|Homo sapiens ribosomal protein L26
           protein.
          Length = 145

 Score =  220 bits (537), Expect = 3e-57
 Identities = 103/135 (76%), Positives = 120/135 (88%)
 Frame = -2

Query: 428 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 249
           MKFN  VTS R KNRKRHF+APSHIRR +MSSPLSKELRQK+NV+SMPIRKDDEVQVVRG
Sbjct: 1   MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMSSPLSKELRQKYNVRSMPIRKDDEVQVVRG 60

Query: 248 HYKGQQVGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILD 69
           HYKGQQ+GKV+QVYRKK+V+YIER+QREKANG T +VGIHPSK VI +LK++KDRK IL+
Sbjct: 61  HYKGQQIGKVVQVYRKKYVIYIERVQREKANGTTVHVGIHPSKVVITRLKLDKDRKKILE 120

Query: 68  RRAKGRLAALGKXQG 24
           R+AK R   +GK +G
Sbjct: 121 RKAKSR--QVGKEKG 133


>CR456828-1|CAG33109.1|  145|Homo sapiens RPL26 protein.
          Length = 145

 Score =  220 bits (537), Expect = 3e-57
 Identities = 103/135 (76%), Positives = 120/135 (88%)
 Frame = -2

Query: 428 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 249
           MKFN  VTS R KNRKRHF+APSHIRR +MSSPLSKELRQK+NV+SMPIRKDDEVQVVRG
Sbjct: 1   MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMSSPLSKELRQKYNVRSMPIRKDDEVQVVRG 60

Query: 248 HYKGQQVGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILD 69
           HYKGQQ+GKV+QVYRKK+V+YIER+QREKANG T +VGIHPSK VI +LK++KDRK IL+
Sbjct: 61  HYKGQQIGKVVQVYRKKYVIYIERVQREKANGTTVHVGIHPSKVVITRLKLDKDRKKILE 120

Query: 68  RRAKGRLAALGKXQG 24
           R+AK R   +GK +G
Sbjct: 121 RKAKSR--QVGKEKG 133


>BC071664-1|AAH71664.1|  145|Homo sapiens RPL26 protein protein.
          Length = 145

 Score =  220 bits (537), Expect = 3e-57
 Identities = 103/135 (76%), Positives = 120/135 (88%)
 Frame = -2

Query: 428 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 249
           MKFN  VTS R KNRKRHF+APSHIRR +MSSPLSKELRQK+NV+SMPIRKDDEVQVVRG
Sbjct: 1   MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMSSPLSKELRQKYNVRSMPIRKDDEVQVVRG 60

Query: 248 HYKGQQVGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILD 69
           HYKGQQ+GKV+QVYRKK+V+YIER+QREKANG T +VGIHPSK VI +LK++KDRK IL+
Sbjct: 61  HYKGQQIGKVVQVYRKKYVIYIERVQREKANGTTVHVGIHPSKVVITRLKLDKDRKKILE 120

Query: 68  RRAKGRLAALGKXQG 24
           R+AK R   +GK +G
Sbjct: 121 RKAKSR--QVGKEKG 133


>AB061829-1|BAB79467.1|  145|Homo sapiens ribosomal protein L26
           protein.
          Length = 145

 Score =  220 bits (537), Expect = 3e-57
 Identities = 103/135 (76%), Positives = 120/135 (88%)
 Frame = -2

Query: 428 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 249
           MKFN  VTS R KNRKRHF+APSHIRR +MSSPLSKELRQK+NV+SMPIRKDDEVQVVRG
Sbjct: 1   MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMSSPLSKELRQKYNVRSMPIRKDDEVQVVRG 60

Query: 248 HYKGQQVGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILD 69
           HYKGQQ+GKV+QVYRKK+V+YIER+QREKANG T +VGIHPSK VI +LK++KDRK IL+
Sbjct: 61  HYKGQQIGKVVQVYRKKYVIYIERVQREKANGTTVHVGIHPSKVVITRLKLDKDRKKILE 120

Query: 68  RRAKGRLAALGKXQG 24
           R+AK R   +GK +G
Sbjct: 121 RKAKSR--QVGKEKG 133


>BC070192-1|AAH70192.1|  145|Homo sapiens ribosomal protein L26-like
           1 protein.
          Length = 145

 Score =  219 bits (536), Expect = 4e-57
 Identities = 102/135 (75%), Positives = 120/135 (88%)
 Frame = -2

Query: 428 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 249
           MKFN  VTS R KNRKRHF+APSH+RR +MSSPLSKELRQK+NV+SMPIRKDDEVQVVRG
Sbjct: 1   MKFNPFVTSDRSKNRKRHFNAPSHVRRKIMSSPLSKELRQKYNVRSMPIRKDDEVQVVRG 60

Query: 248 HYKGQQVGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILD 69
           HYKGQQ+GKV+QVYRKK+V+YIER+QREKANG T +VGIHPSK VI +LK++KDRK IL+
Sbjct: 61  HYKGQQIGKVVQVYRKKYVIYIERVQREKANGTTVHVGIHPSKVVITRLKLDKDRKKILE 120

Query: 68  RRAKGRLAALGKXQG 24
           R+AK R   +GK +G
Sbjct: 121 RKAKSR--QVGKEKG 133


>BC017360-1|AAH17360.1|  145|Homo sapiens ribosomal protein L26-like
           1 protein.
          Length = 145

 Score =  219 bits (536), Expect = 4e-57
 Identities = 102/135 (75%), Positives = 120/135 (88%)
 Frame = -2

Query: 428 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 249
           MKFN  VTS R KNRKRHF+APSH+RR +MSSPLSKELRQK+NV+SMPIRKDDEVQVVRG
Sbjct: 1   MKFNPFVTSDRSKNRKRHFNAPSHVRRKIMSSPLSKELRQKYNVRSMPIRKDDEVQVVRG 60

Query: 248 HYKGQQVGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILD 69
           HYKGQQ+GKV+QVYRKK+V+YIER+QREKANG T +VGIHPSK VI +LK++KDRK IL+
Sbjct: 61  HYKGQQIGKVVQVYRKKYVIYIERVQREKANGTTVHVGIHPSKVVITRLKLDKDRKKILE 120

Query: 68  RRAKGRLAALGKXQG 24
           R+AK R   +GK +G
Sbjct: 121 RKAKSR--QVGKEKG 133


>L07287-1|AAA60279.1|  145|Homo sapiens ribosomal protein L26
           protein.
          Length = 145

 Score =  218 bits (533), Expect = 1e-56
 Identities = 100/126 (79%), Positives = 115/126 (91%)
 Frame = -2

Query: 428 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 249
           MKFN  VTS R KNRKRHF+APSHIRR +MSSPLSKELRQK+NV+SMPIRKDDEVQVVRG
Sbjct: 1   MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMSSPLSKELRQKYNVRSMPIRKDDEVQVVRG 60

Query: 248 HYKGQQVGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILD 69
           HYKGQQ+GKV+QVYRKK+V+YIER+QREKANG T +VGIHPSK VI +LK++KDRK IL+
Sbjct: 61  HYKGQQIGKVVQVYRKKYVIYIERVQREKANGTTVHVGIHPSKVVITRLKLDKDRKKILE 120

Query: 68  RRAKGR 51
           R+AK R
Sbjct: 121 RKAKSR 126


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,416,742
Number of Sequences: 237096
Number of extensions: 1594933
Number of successful extensions: 3920
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3758
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3920
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6042162242
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)