Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_pT_P05
         (647 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    23   2.2  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    23   2.2  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    23   2.2  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    23   2.2  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   6.6  
EF532798-1|ABQ08060.1|   50|Tribolium castaneum acetylcholineste...    21   8.7  

>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 6/13 (46%), Positives = 11/13 (84%)
 Frame = -3

Query: 414 SSYFVFVVGRYAC 376
           +SYF ++ G++AC
Sbjct: 387 ASYFAYIFGKFAC 399


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 6/13 (46%), Positives = 11/13 (84%)
 Frame = -3

Query: 414 SSYFVFVVGRYAC 376
           +SYF ++ G++AC
Sbjct: 387 ASYFAYIFGKFAC 399


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 6/13 (46%), Positives = 11/13 (84%)
 Frame = -3

Query: 414 SSYFVFVVGRYAC 376
           +SYF ++ G++AC
Sbjct: 387 ASYFAYIFGKFAC 399


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 6/13 (46%), Positives = 11/13 (84%)
 Frame = -3

Query: 414 SSYFVFVVGRYAC 376
           +SYF ++ G++AC
Sbjct: 387 ASYFAYIFGKFAC 399


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = -1

Query: 224 KYLSCIISKNLILTQVNFAYCN 159
           K++  I+ KN+ L  V F +C+
Sbjct: 73  KHIFNILMKNVTLNDVVFIFCS 94


>EF532798-1|ABQ08060.1|   50|Tribolium castaneum
           acetylcholinesterase protein.
          Length = 50

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 7/8 (87%), Positives = 8/8 (100%)
 Frame = +2

Query: 410 DDCLYLNI 433
           +DCLYLNI
Sbjct: 11  EDCLYLNI 18


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,123
Number of Sequences: 336
Number of extensions: 2681
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16656800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)