Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_pT_P05
         (647 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_01_0280 - 2056449-2056487,2056613-2056930,2057025-2057171,205...    29   3.2  
11_02_0072 + 8015915-8015934,8016064-8016946,8017474-8018475           28   7.4  
06_01_0278 - 2042574-2042612,2042738-2043055,2043150-2043296,204...    28   7.4  
07_03_0423 + 18035688-18036572,18036659-18036978,18052618-180527...    27   9.7  

>06_01_0280 -
           2056449-2056487,2056613-2056930,2057025-2057171,
           2057273-2058112,2059044-2059117,2059515-2059647,
           2059804-2059941
          Length = 562

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 14/43 (32%), Positives = 23/43 (53%)
 Frame = -1

Query: 287 LTISFPRPMCNIYRRVL*IYAKYLSCIISKNLILTQVNFAYCN 159
           +T+S  R +  +Y   + I    L C++S +L L Q+   YCN
Sbjct: 263 VTLSGLRSLTRLYLCRVRITENELGCLLSHSLALEQLEIRYCN 305


>11_02_0072 + 8015915-8015934,8016064-8016946,8017474-8018475
          Length = 634

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
 Frame = -2

Query: 424 IETVVLFCFCCRALRVCYGTLT-IRCLWRL 338
           I  ++   FC    + CYGTL+ I+CL RL
Sbjct: 35  ITIIIQLLFCYMLCQPCYGTLSDIQCLKRL 64


>06_01_0278 -
           2042574-2042612,2042738-2043055,2043150-2043296,
           2043382-2044221,2045182-2045282,2045666-2045791,
           2047124-2047214
          Length = 553

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 13/43 (30%), Positives = 23/43 (53%)
 Frame = -1

Query: 287 LTISFPRPMCNIYRRVL*IYAKYLSCIISKNLILTQVNFAYCN 159
           +T+S  R +  +Y   + I    L C++S +L L Q+   YC+
Sbjct: 254 VTLSGLRSLMRLYLCCVRITENELGCLLSHSLALEQLEIRYCD 296


>07_03_0423 + 18035688-18036572,18036659-18036978,18052618-18052724,
            18053001-18053104,18054129-18054328,18054422-18054522,
            18054695-18054841,18055007-18055166,18055287-18055368,
            18056070-18056336,18056846-18056973,18057513-18057672
          Length = 886

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 18/80 (22%), Positives = 38/80 (47%), Gaps = 2/80 (2%)
 Frame = +1

Query: 364  VFRSTRVTPYNKNKIRRLSLSKYRCAVFIAWYCN*ILYGFFNSLLN--*KPHLRHLFIKK 537
            V ++ R+   NK   R     KY+  + +    N +L G+F+   N   + +   + + K
Sbjct: 764  VVKTKRLNITNKTGFRAYMFLKYKLPLEVLHLVNPLLGGYFSQYYNKSIRSYRYFVLLAK 823

Query: 538  IAVVTAFYSLRLSGSSYFRL 597
            + +  AF++   +G++  RL
Sbjct: 824  LYMPYAFFNACFNGTNLARL 843


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,910,682
Number of Sequences: 37544
Number of extensions: 237060
Number of successful extensions: 369
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 366
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 369
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1608522592
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)