Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P15_pT_P04
(730 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z79754-10|CAB02099.1| 181|Caenorhabditis elegans Hypothetical p... 109 3e-24
U49954-5|AAA93427.2| 445|Caenorhabditis elegans Odorant respons... 31 0.64
U49954-4|AAN84809.1| 473|Caenorhabditis elegans Odorant respons... 31 0.64
U49954-3|AAN84808.1| 475|Caenorhabditis elegans Odorant respons... 31 0.64
AF055911-1|AAC39022.1| 445|Caenorhabditis elegans odorant respo... 31 0.64
Z81072-15|CAB03026.2| 1262|Caenorhabditis elegans Hypothetical p... 28 5.9
Z81048-10|CAB02845.2| 1262|Caenorhabditis elegans Hypothetical p... 28 5.9
Z73911-4|CAA98141.2| 625|Caenorhabditis elegans Hypothetical pr... 28 7.9
>Z79754-10|CAB02099.1| 181|Caenorhabditis elegans Hypothetical
protein F25H2.11 protein.
Length = 181
Score = 109 bits (261), Expect = 3e-24
Identities = 50/100 (50%), Positives = 70/100 (70%), Gaps = 2/100 (2%)
Frame = -2
Query: 654 MKIYKDIITGDEMFSDTYKMKLVDEVIYEVTGRLVTRAQGDIQIEGFNPSAEEA--DEGT 481
M IYKDI T DE+ SD++ MKLVD+++YE G+ V R +G+I + G NPSAEE D+G+
Sbjct: 1 MLIYKDIFTDDELSSDSFPMKLVDDLVYEFKGKHVVRKEGEIVLAGSNPSAEEGAEDDGS 60
Query: 480 DSAVESGVDIVLNHRLVETYAFGDKKSYTLYLKDYMKKLV 361
D VE G+DIVLNH+LVE + D + Y+K +MK ++
Sbjct: 61 DEHVERGIDIVLNHKLVEMNCYEDASMFKAYIKKFMKNVI 100
Score = 50.0 bits (114), Expect = 2e-06
Identities = 28/68 (41%), Positives = 39/68 (57%), Gaps = 5/68 (7%)
Frame = -3
Query: 329 VEVFKTNMNKVMKDILG--RFKELQFFTGESMDC---DGMVAMMEYRDFDGTQIPIMMFF 165
V+ FK + + +L RFK L FF GE +G VA++EYRD DGT++P +M
Sbjct: 113 VDAFKKKIQGWVVSLLAKDRFKNLAFFIGERAAEGAENGQVAIIEYRDVDGTEVPTLMLV 172
Query: 164 KHGLEEEK 141
K + EEK
Sbjct: 173 KEAIIEEK 180
>U49954-5|AAA93427.2| 445|Caenorhabditis elegans Odorant response
abnormal protein4, isoform a protein.
Length = 445
Score = 31.5 bits (68), Expect = 0.64
Identities = 10/41 (24%), Positives = 25/41 (60%)
Frame = +1
Query: 604 SVREHLITSDNVLIDLHFDGLEAIKNNKNRKNGFSPQQLNR 726
+++ HL+ + ++LH++ +E ++ ++ K G + QL R
Sbjct: 298 AIKHHLVRNLFARVELHYESMEVVEEERSPKTGITVHQLPR 338
>U49954-4|AAN84809.1| 473|Caenorhabditis elegans Odorant response
abnormal protein4, isoform c protein.
Length = 473
Score = 31.5 bits (68), Expect = 0.64
Identities = 10/41 (24%), Positives = 25/41 (60%)
Frame = +1
Query: 604 SVREHLITSDNVLIDLHFDGLEAIKNNKNRKNGFSPQQLNR 726
+++ HL+ + ++LH++ +E ++ ++ K G + QL R
Sbjct: 326 AIKHHLVRNLFARVELHYESMEVVEEERSPKTGITVHQLPR 366
>U49954-3|AAN84808.1| 475|Caenorhabditis elegans Odorant response
abnormal protein4, isoform b protein.
Length = 475
Score = 31.5 bits (68), Expect = 0.64
Identities = 10/41 (24%), Positives = 25/41 (60%)
Frame = +1
Query: 604 SVREHLITSDNVLIDLHFDGLEAIKNNKNRKNGFSPQQLNR 726
+++ HL+ + ++LH++ +E ++ ++ K G + QL R
Sbjct: 328 AIKHHLVRNLFARVELHYESMEVVEEERSPKTGITVHQLPR 368
>AF055911-1|AAC39022.1| 445|Caenorhabditis elegans odorant response
protein ODR-4 protein.
Length = 445
Score = 31.5 bits (68), Expect = 0.64
Identities = 10/41 (24%), Positives = 25/41 (60%)
Frame = +1
Query: 604 SVREHLITSDNVLIDLHFDGLEAIKNNKNRKNGFSPQQLNR 726
+++ HL+ + ++LH++ +E ++ ++ K G + QL R
Sbjct: 298 AIKHHLVRNLFARVELHYESMEVVEEERSPKTGITVHQLPR 338
>Z81072-15|CAB03026.2| 1262|Caenorhabditis elegans Hypothetical
protein F30A10.10 protein.
Length = 1262
Score = 28.3 bits (60), Expect = 5.9
Identities = 15/27 (55%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Frame = -2
Query: 516 FNPSAEEADEGTDSAVESG-VDIVLNH 439
F+PSA +ADE D A E G VD L H
Sbjct: 1236 FSPSASQADETGDRAPERGFVDTALAH 1262
>Z81048-10|CAB02845.2| 1262|Caenorhabditis elegans Hypothetical
protein F30A10.10 protein.
Length = 1262
Score = 28.3 bits (60), Expect = 5.9
Identities = 15/27 (55%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Frame = -2
Query: 516 FNPSAEEADEGTDSAVESG-VDIVLNH 439
F+PSA +ADE D A E G VD L H
Sbjct: 1236 FSPSASQADETGDRAPERGFVDTALAH 1262
>Z73911-4|CAA98141.2| 625|Caenorhabditis elegans Hypothetical
protein T12A7.1 protein.
Length = 625
Score = 27.9 bits (59), Expect = 7.9
Identities = 22/84 (26%), Positives = 40/84 (47%)
Frame = -2
Query: 669 LQSIKMKIYKDIITGDEMFSDTYKMKLVDEVIYEVTGRLVTRAQGDIQIEGFNPSAEEAD 490
+Q + M+ + +G + +DT L EV+YEV +L G ++ GF P + +
Sbjct: 523 VQFVTMRDFLGNQSGGYLNTDTIMENLAREVLYEVPDQLT----GYMKRRGFTPKSRDDP 578
Query: 489 EGTDSAVESGVDIVLNHRLVETYA 418
DS + D ++++ L T A
Sbjct: 579 WQRDSPPDE-YDPIMDNILSSTQA 601
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,983,869
Number of Sequences: 27780
Number of extensions: 325109
Number of successful extensions: 875
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 849
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 874
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1718929214
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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