Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_pT_P01
         (587 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF000263-4|AAG00016.1|  159|Caenorhabditis elegans Hypothetical ...    91   7e-19
Z83317-3|CAB05897.1|  217|Caenorhabditis elegans Hypothetical pr...    28   4.3  
Z99280-3|CAE18018.1|  215|Caenorhabditis elegans Hypothetical pr...    28   5.7  
Z73971-12|CAC42267.1|  718|Caenorhabditis elegans Hypothetical p...    28   5.7  
Z72515-6|CAA96686.2|  718|Caenorhabditis elegans Hypothetical pr...    28   5.7  
U88169-2|AAB42234.1|  342|Caenorhabditis elegans Hypothetical pr...    28   5.7  
Z81109-5|CAB03251.1|  588|Caenorhabditis elegans Hypothetical pr...    27   9.9  
AF003136-5|AAK21372.1|  203|Caenorhabditis elegans Hypothetical ...    27   9.9  

>AF000263-4|AAG00016.1|  159|Caenorhabditis elegans Hypothetical
           protein T08B2.8 protein.
          Length = 159

 Score = 90.6 bits (215), Expect = 7e-19
 Identities = 51/120 (42%), Positives = 73/120 (60%), Gaps = 9/120 (7%)
 Frame = -3

Query: 510 MSTRWYPIYQRGNPQLRVFLPNFWMKLVRPHPX---QLP-NIVHFHCSMEMTKYDIQNYL 343
           M++R   ++Q GNPQ RVFLP+FWM +V        +LP N V F     M+++DI+ YL
Sbjct: 1   MTSRLARLWQPGNPQRRVFLPDFWMAVVESPSVGRNRLPRNCVKFEVDPRMSRHDIREYL 60

Query: 342 EKIYEVPVVDVRTKINMGXF----KKD-VVKGYVIKEDDVKVAFVTLPKTMTFKYPDLFE 178
            KIY++PV DVRT++ MG      K D   K  + K++D K+A+V + K   F YP +FE
Sbjct: 61  TKIYDLPVRDVRTEVQMGDITWNSKLDHQYKKAMWKDEDKKIAYVFMSKGFEFSYPQMFE 120


>Z83317-3|CAB05897.1|  217|Caenorhabditis elegans Hypothetical
           protein F13G11.2 protein.
          Length = 217

 Score = 28.3 bits (60), Expect = 4.3
 Identities = 12/23 (52%), Positives = 16/23 (69%)
 Frame = -3

Query: 408 LPNIVHFHCSMEMTKYDIQNYLE 340
           +PN   FHC+++  K D QNYLE
Sbjct: 27  IPN--QFHCNIKNLKRDAQNYLE 47


>Z99280-3|CAE18018.1|  215|Caenorhabditis elegans Hypothetical
           protein Y57G11B.7 protein.
          Length = 215

 Score = 27.9 bits (59), Expect = 5.7
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = -3

Query: 408 LPNIVHFHCSMEMTKYDIQNYLE 340
           +PN  H HCS++    D QNYLE
Sbjct: 25  IPN--HLHCSIKNLTRDAQNYLE 45


>Z73971-12|CAC42267.1|  718|Caenorhabditis elegans Hypothetical
           protein T11A5.6 protein.
          Length = 718

 Score = 27.9 bits (59), Expect = 5.7
 Identities = 10/20 (50%), Positives = 15/20 (75%)
 Frame = -2

Query: 553 NIVYYPXLNTSNFNNVHTVV 494
           N  +YP LNTS+F+ +H+ V
Sbjct: 696 NAQHYPLLNTSSFDPIHSTV 715


>Z72515-6|CAA96686.2|  718|Caenorhabditis elegans Hypothetical
           protein T11A5.6 protein.
          Length = 718

 Score = 27.9 bits (59), Expect = 5.7
 Identities = 10/20 (50%), Positives = 15/20 (75%)
 Frame = -2

Query: 553 NIVYYPXLNTSNFNNVHTVV 494
           N  +YP LNTS+F+ +H+ V
Sbjct: 696 NAQHYPLLNTSSFDPIHSTV 715


>U88169-2|AAB42234.1|  342|Caenorhabditis elegans Hypothetical
           protein T03F1.6a protein.
          Length = 342

 Score = 27.9 bits (59), Expect = 5.7
 Identities = 11/33 (33%), Positives = 16/33 (48%)
 Frame = -3

Query: 405 PNIVHFHCSMEMTKYDIQNYLEKIYEVPVVDVR 307
           PN+ HFHCS+   + D+      +   PV   R
Sbjct: 290 PNLQHFHCSLPHDEIDLSQEFLALLNEPVRKTR 322


>Z81109-5|CAB03251.1|  588|Caenorhabditis elegans Hypothetical
           protein R10D12.8 protein.
          Length = 588

 Score = 27.1 bits (57), Expect = 9.9
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -3

Query: 396 VHFHCSMEMTKYDIQNYLEK 337
           +HFHC  + TKYD     +K
Sbjct: 63  IHFHCLTQNTKYDFFQIFDK 82


>AF003136-5|AAK21372.1|  203|Caenorhabditis elegans Hypothetical
           protein F28B3.4 protein.
          Length = 203

 Score = 27.1 bits (57), Expect = 9.9
 Identities = 19/79 (24%), Positives = 35/79 (44%)
 Frame = -3

Query: 453 LPNFWMKLVRPHPXQLPNIVHFHCSMEMTKYDIQNYLEKIYEVPVVDVRTKINMGXFKKD 274
           L N W+ L+  HP  +P  +   CS+ +   +  + L       + ++  +++ G   K 
Sbjct: 19  LNNSWLFLLVLHPFDIPLYISKSCSLLLQIMNDPDTLPDEVREKLAELDLELSEGDITK- 77

Query: 273 VVKGYVIKEDDVKVAFVTL 217
             KGY  K D +   F +L
Sbjct: 78  --KGYDKKRDALLAPFKSL 94


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,530,108
Number of Sequences: 27780
Number of extensions: 180482
Number of successful extensions: 330
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 327
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 328
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1237082886
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)