Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P15_pT_O23
(398 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF003140-9|AAB54171.1| 86|Caenorhabditis elegans Acyl-coenzyme... 79 2e-15
Z68004-6|CAA91987.2| 116|Caenorhabditis elegans Hypothetical pr... 71 2e-13
AL023828-1|CAA19448.1| 115|Caenorhabditis elegans Hypothetical ... 60 8e-10
Z46794-8|CAA86779.1| 385|Caenorhabditis elegans Hypothetical pr... 58 2e-09
U00063-1|AAK18960.1| 146|Caenorhabditis elegans Acyl-coenzyme a... 55 2e-08
Z92826-2|CAB07319.1| 266|Caenorhabditis elegans Hypothetical pr... 49 1e-06
U27312-8|AAZ32809.1| 219|Caenorhabditis elegans Hypothetical pr... 38 0.003
U28942-1|AAA68355.2| 441|Caenorhabditis elegans Hypothetical pr... 30 0.70
U41274-5|AAA82461.2| 571|Caenorhabditis elegans Nematode astaci... 29 1.2
AL031635-6|CAA21044.1| 761|Caenorhabditis elegans Hypothetical ... 28 2.1
AC024214-14|AAU87808.1| 644|Caenorhabditis elegans Hypothetical... 28 2.8
AL031621-2|CAA20934.2| 1000|Caenorhabditis elegans Hypothetical ... 27 3.7
Z78419-3|CAB01701.2| 1632|Caenorhabditis elegans Hypothetical pr... 27 5.0
U29097-2|AAA68410.2| 1056|Caenorhabditis elegans Human wrn (wern... 27 5.0
AF159143-1|AAF80367.1| 1632|Caenorhabditis elegans RNA-directed ... 27 5.0
AC024202-12|AAF36031.2| 143|Caenorhabditis elegans Hypothetical... 27 5.0
Z81529-5|CAB04296.1| 288|Caenorhabditis elegans Hypothetical pr... 27 6.5
U53141-2|AAA96104.2| 491|Caenorhabditis elegans Hypothetical pr... 27 6.5
AF040661-9|AAG24214.1| 345|Caenorhabditis elegans Hypothetical ... 27 6.5
Z72511-3|CAA96657.1| 610|Caenorhabditis elegans Hypothetical pr... 26 8.7
U97593-1|AAB52875.1| 715|Caenorhabditis elegans Hypothetical pr... 26 8.7
>AF003140-9|AAB54171.1| 86|Caenorhabditis elegans Acyl-coenzyme a
binding proteinprotein 1 protein.
Length = 86
Score = 78.6 bits (185), Expect = 2e-15
Identities = 37/80 (46%), Positives = 52/80 (65%), Gaps = 2/80 (2%)
Frame = -2
Query: 298 FKQVADKVRNWKTKPSDDENLALYSLYKQATIGDVNIAQPS--GLVESAKWKAWNSRKGI 125
F A V+ KT PS+DE L LY+L+KQ T+GD +P L AKW AW+ +KG+
Sbjct: 5 FDDAAATVKTLKTSPSNDELLKLYALFKQGTVGDNTTDKPGMFDLKGKAKWSAWDEKKGL 64
Query: 124 SQDDAKKQYIANAEKLHSKY 65
++DDA+K Y+A E+L +KY
Sbjct: 65 AKDDAQKAYVALVEELIAKY 84
>Z68004-6|CAA91987.2| 116|Caenorhabditis elegans Hypothetical
protein F47B10.7 protein.
Length = 116
Score = 71.3 bits (167), Expect = 2e-13
Identities = 37/91 (40%), Positives = 55/91 (60%), Gaps = 6/91 (6%)
Frame = -2
Query: 316 MSLDEQFKQVADKVRNW-KTKP---SDDENLALYSLYKQATIGDVNIAQPS--GLVESAK 155
MSL E+F + ++ KT P S+D+ L YSL+KQA+IGDVN +P ++E K
Sbjct: 1 MSLQEKFDAAVEIIQKLPKTGPVATSNDQKLTFYSLFKQASIGDVNTDRPGIFSIIERKK 60
Query: 154 WKAWNSRKGISQDDAKKQYIANAEKLHSKYA 62
W +W +G+SQD+AK++YI + K A
Sbjct: 61 WDSWKELEGVSQDEAKERYIKALNDMFDKIA 91
>AL023828-1|CAA19448.1| 115|Caenorhabditis elegans Hypothetical
protein Y17G7B.1 protein.
Length = 115
Score = 59.7 bits (138), Expect = 8e-10
Identities = 32/83 (38%), Positives = 50/83 (60%), Gaps = 5/83 (6%)
Frame = -2
Query: 298 FKQVADKVRNWKTKPSDDENLALYSLYKQATIGDVN----IAQPSG-LVESAKWKAWNSR 134
F+ A+++R K++P+D E L LY+LYKQA GD+ P+G V K+ AW S+
Sbjct: 15 FEIAAEEMRRLKSEPTDRERLKLYALYKQALHGDIPNEDVYPVPAGDEVGRKKYAAWKSQ 74
Query: 133 KGISQDDAKKQYIANAEKLHSKY 65
KG + + + Y+A AE++ KY
Sbjct: 75 KGANSEKCRADYVAIAEEMIKKY 97
>Z46794-8|CAA86779.1| 385|Caenorhabditis elegans Hypothetical
protein R06F6.9 protein.
Length = 385
Score = 58.4 bits (135), Expect = 2e-09
Identities = 29/74 (39%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Frame = -2
Query: 313 SLDEQFKQVADKVRNWKTKPSDDENLALYSLYKQATIGDVNIAQPS--GLVESAKWKAWN 140
S F++ ++ K +P +D L LY L+KQAT GDV +P V AK+ AWN
Sbjct: 24 SAQADFEKAQKNLKTLKEEPDNDVKLQLYGLFKQATAGDVQGKRPGMMDFVGRAKYDAWN 83
Query: 139 SRKGISQDDAKKQY 98
+ KG +QD+A+ Y
Sbjct: 84 TLKGQTQDEARANY 97
>U00063-1|AAK18960.1| 146|Caenorhabditis elegans Acyl-coenzyme a
binding proteinprotein 4 protein.
Length = 146
Score = 54.8 bits (126), Expect = 2e-08
Identities = 32/85 (37%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Frame = -2
Query: 313 SLDEQFKQVADKV----RNWKTKPSDDENLALYSLYKQATIGDVNIAQP--SGLVESAKW 152
SLDEQF+ + +N K S ++ L +YSLYKQAT G + QP + + KW
Sbjct: 4 SLDEQFEAAVWIINALPKNGPIKTSINDQLQMYSLYKQATSGKCDTIQPYFFQIEQRMKW 63
Query: 151 KAWNSRKGISQDDAKKQYIANAEKL 77
AWN + + +AK QY+ KL
Sbjct: 64 NAWNQLGNMDEAEAKAQYVEKMLKL 88
>Z92826-2|CAB07319.1| 266|Caenorhabditis elegans Hypothetical
protein C18D11.2 protein.
Length = 266
Score = 49.2 bits (112), Expect = 1e-06
Identities = 23/57 (40%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Frame = -2
Query: 259 KPSDDENLALYSLYKQATIGDVNIAQPS--GLVESAKWKAWNSRKGISQDDAKKQYI 95
K S DE L Y+L+KQAT G ++ +PS + KW AWN ++ D+AK+ Y+
Sbjct: 21 KTSTDEKLNFYALFKQATHGKCDLPKPSFYDIQGVYKWNAWNKLDNMTMDEAKQAYV 77
>U27312-8|AAZ32809.1| 219|Caenorhabditis elegans Hypothetical
protein F26A1.15 protein.
Length = 219
Score = 37.9 bits (84), Expect = 0.003
Identities = 19/66 (28%), Positives = 37/66 (56%), Gaps = 14/66 (21%)
Frame = -2
Query: 232 LYSLYKQATIGDVNIAQPSGLV--------------ESAKWKAWNSRKGISQDDAKKQYI 95
++ LY+QA +GDVN+ + + + + KW AWN +G+++++A +QY+
Sbjct: 123 VWGLYQQAIVGDVNVPKLNYMEIDEGEKSWMWRWINGNEKWHAWNKCRGLTKEEASEQYV 182
Query: 94 ANAEKL 77
+KL
Sbjct: 183 EAVQKL 188
>U28942-1|AAA68355.2| 441|Caenorhabditis elegans Hypothetical
protein F56D3.1 protein.
Length = 441
Score = 29.9 bits (64), Expect = 0.70
Identities = 16/47 (34%), Positives = 22/47 (46%)
Frame = -3
Query: 297 SNRSPIRLGTGRPSPVTMRTLRCTPCTSRLP*VMLTLPSPAVLWRAP 157
+ ++P + T RP P T T+R P P TLP + RAP
Sbjct: 110 TTQAPTTIRTTRPPPAT--TIRTIPFVQTTPATFATLPPAPAVTRAP 154
>U41274-5|AAA82461.2| 571|Caenorhabditis elegans Nematode astacin
protease protein15 protein.
Length = 571
Score = 29.1 bits (62), Expect = 1.2
Identities = 22/65 (33%), Positives = 31/65 (47%)
Frame = -3
Query: 264 RPSPVTMRTLRCTPCTSRLP*VMLTLPSPAVLWRAPSGRHGTVAKASPKTMPRSNTSQMR 85
+P P + R T T+R ++TLP + R+P+ T KA+P T S TS
Sbjct: 473 KPPPTEIPDNRPTVVTTR---PLVTLPPAVIRSRSPAPPVSTTTKAAPTT---STTSAAP 526
Query: 84 RSSTP 70
S TP
Sbjct: 527 YSPTP 531
>AL031635-6|CAA21044.1| 761|Caenorhabditis elegans Hypothetical
protein Y47D3B.9 protein.
Length = 761
Score = 28.3 bits (60), Expect = 2.1
Identities = 21/92 (22%), Positives = 39/92 (42%)
Frame = -3
Query: 336 ISKDNTKCLSTSNSNRSPIRLGTGRPSPVTMRTLRCTPCTSRLP*VMLTLPSPAVLWRAP 157
+ +D + ++S+ S R+ + P T +L + +L + + A
Sbjct: 505 MEEDTENHVEAASSSSSDERIKSETPDTYGSPNTSTTDQNEQLAAFVSSLSNSNPMMFAM 564
Query: 156 SGRHGTVAKASPKTMPRSNTSQMRRSSTPNTH 61
G ++P P+S+TSQ R SS P+ H
Sbjct: 565 LNAAGNSTSSAPAP-PKSSTSQQRSSSPPSAH 595
>AC024214-14|AAU87808.1| 644|Caenorhabditis elegans Hypothetical
protein Y77E11A.12b protein.
Length = 644
Score = 27.9 bits (59), Expect = 2.8
Identities = 19/50 (38%), Positives = 23/50 (46%)
Frame = +2
Query: 131 FATVPCLPLGALHKTAGLGNVNITYGSLLVQGVQRKVLIVTGLGLPVPNL 280
+ +VP L LG + G N N LL QG +L GLG PNL
Sbjct: 7 YLSVPMLNLGQRRSSEGYLNAN----DLLSQGGGESLLDSAGLGTSQPNL 52
>AL031621-2|CAA20934.2| 1000|Caenorhabditis elegans Hypothetical
protein F28H6.4 protein.
Length = 1000
Score = 27.5 bits (58), Expect = 3.7
Identities = 25/103 (24%), Positives = 44/103 (42%), Gaps = 1/103 (0%)
Frame = -3
Query: 384 RPMTVPIGTLQLPYLL-ISKDNTKCLSTSNSNRSPIRLGTGRPSPVTMRTLRCTPCTSRL 208
RP P + Q P + ++K ++ + S + +G P P TL +
Sbjct: 618 RPSENPGTSAQSPQSVNVAKVQSRNMKKPQSVPTATDIGLKEPKPEPAETLEKEIKPENV 677
Query: 207 P*VMLTLPSPAVLWRAPSGRHGTVAKASPKTMPRSNTSQMRRS 79
M + P + PSGR + KA+ +++PRSN + +S
Sbjct: 678 AENMRS-PVKRTVINGPSGRVTILPKANIRSVPRSNLTSETQS 719
>Z78419-3|CAB01701.2| 1632|Caenorhabditis elegans Hypothetical
protein F26A3.3 protein.
Length = 1632
Score = 27.1 bits (57), Expect = 5.0
Identities = 14/51 (27%), Positives = 26/51 (50%), Gaps = 5/51 (9%)
Frame = -2
Query: 283 DKVRNWK-----TKPSDDENLALYSLYKQATIGDVNIAQPSGLVESAKWKA 146
D +R W +KPSDD + +L +++ + I ++ P VE K+ +
Sbjct: 719 DNLRQWSISYNISKPSDDSSWSLNCMFRPSQIKFISKRHPRDQVEIVKYSS 769
>U29097-2|AAA68410.2| 1056|Caenorhabditis elegans Human wrn
(werner's syndrome) relatedprotein 1 protein.
Length = 1056
Score = 27.1 bits (57), Expect = 5.0
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = -3
Query: 144 GTVAKASPKTMPRSNTSQMRRSSTPNTHKLL 52
G KA+P T+P ++ SQ +SST K+L
Sbjct: 747 GKKEKAAPSTVPGASRSQSTKSSTEIPTKIL 777
>AF159143-1|AAF80367.1| 1632|Caenorhabditis elegans RNA-directed RNA
polymerase relatedEGO-1 protein.
Length = 1632
Score = 27.1 bits (57), Expect = 5.0
Identities = 14/51 (27%), Positives = 26/51 (50%), Gaps = 5/51 (9%)
Frame = -2
Query: 283 DKVRNWK-----TKPSDDENLALYSLYKQATIGDVNIAQPSGLVESAKWKA 146
D +R W +KPSDD + +L +++ + I ++ P VE K+ +
Sbjct: 719 DNLRQWSISYNISKPSDDSSWSLNCMFRPSQIKFISKRHPRDQVEIVKYSS 769
>AC024202-12|AAF36031.2| 143|Caenorhabditis elegans Hypothetical
protein Y71H2B.1 protein.
Length = 143
Score = 27.1 bits (57), Expect = 5.0
Identities = 17/56 (30%), Positives = 27/56 (48%)
Frame = -2
Query: 232 LYSLYKQATIGDVNIAQPSGLVESAKWKAWNSRKGISQDDAKKQYIANAEKLHSKY 65
L +LY QAT+GD + G + W G +Q +A ++YI + +KY
Sbjct: 84 LNALYMQATVGDYD-----GNTALKCGQYWKKHSGKTQIEAIREYIKLTNQTLTKY 134
>Z81529-5|CAB04296.1| 288|Caenorhabditis elegans Hypothetical
protein F35E8.7 protein.
Length = 288
Score = 26.6 bits (56), Expect = 6.5
Identities = 20/70 (28%), Positives = 30/70 (42%), Gaps = 1/70 (1%)
Frame = -3
Query: 300 NSN-RSPIRLGTGRPSPVTMRTLRCTPCTSRLP*VMLTLPSPAVLWRAPSGRHGTVAKAS 124
N+N R + T P+ T P T+ P V+ T +PA + + TVA A+
Sbjct: 180 NANCRKTCKRCTSGPTATTSTAAPAAPTTTVAPAVVTTTAAPAAVTTTAAVTTTTVAAAA 239
Query: 123 PKTMPRSNTS 94
T + TS
Sbjct: 240 ATTTAAACTS 249
>U53141-2|AAA96104.2| 491|Caenorhabditis elegans Hypothetical
protein C14C11.4 protein.
Length = 491
Score = 26.6 bits (56), Expect = 6.5
Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 6/64 (9%)
Frame = -3
Query: 396 NEFGRPMTVPIGTLQLPYLLISKDNTKCLSTS------NSNRSPIRLGTGRPSPVTMRTL 235
+++GR M T+ + I+KD + TS + +R+ +G PSPV+ R L
Sbjct: 261 DQYGRQMYAINQTIAFTF--IAKDGNQLYITSLKFNEIEDEKCEMRIISGTPSPVSRRLL 318
Query: 234 RCTP 223
TP
Sbjct: 319 TYTP 322
>AF040661-9|AAG24214.1| 345|Caenorhabditis elegans Hypothetical
protein W10G11.5 protein.
Length = 345
Score = 26.6 bits (56), Expect = 6.5
Identities = 20/80 (25%), Positives = 33/80 (41%), Gaps = 1/80 (1%)
Frame = -3
Query: 342 LLISKDNTKCLSTSNSNRSPIRL-GTGRPSPVTMRTLRCTPCTSRLP*VMLTLPSPAVLW 166
+L + T +T + P + T P+ VT ++ T +++LP + T P P
Sbjct: 91 ILTTVTTTSTTTTVTTTPIPTTVTSTHIPTTVTTTSIPTTVPSTQLPTTVTTTPIPTTTT 150
Query: 165 RAPSGRHGTVAKASPKTMPR 106
R + K P T PR
Sbjct: 151 RKTTTTTLRPTKPRPMTKPR 170
>Z72511-3|CAA96657.1| 610|Caenorhabditis elegans Hypothetical
protein F55A11.3 protein.
Length = 610
Score = 26.2 bits (55), Expect = 8.7
Identities = 18/66 (27%), Positives = 27/66 (40%)
Frame = -3
Query: 267 GRPSPVTMRTLRCTPCTSRLP*VMLTLPSPAVLWRAPSGRHGTVAKASPKTMPRSNTSQM 88
G+P P + P + P M +P P + P G + P +P+ NT+Q
Sbjct: 402 GQPGPFPHQIFYA-PAPANRPEFMNLIPPPPLPMAGPPGMFPMMP---PPPLPQVNTTQG 457
Query: 87 RRSSTP 70
S TP
Sbjct: 458 TSSETP 463
>U97593-1|AAB52875.1| 715|Caenorhabditis elegans Hypothetical
protein C46G7.3 protein.
Length = 715
Score = 26.2 bits (55), Expect = 8.7
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = -3
Query: 303 SNSNRSPIRLGTGRPSPVTMRTLRCTPCTSR 211
+N NR + G S + TL+CT C+ R
Sbjct: 645 ANDNRCAVCAGERHSSSMCYSTLKCTYCSGR 675
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,164,292
Number of Sequences: 27780
Number of extensions: 223550
Number of successful extensions: 736
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 710
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 729
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 619699724
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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