Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_pT_O23
         (398 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    22   2.2  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       22   3.0  
DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1 pr...    21   3.9  
AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-ri...    21   3.9  
AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.    21   3.9  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              21   6.9  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    20   9.1  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    20   9.1  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    20   9.1  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    20   9.1  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    20   9.1  

>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 22.2 bits (45), Expect = 2.2
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +3

Query: 150 FHLALSTRPLGWAMLTSP 203
           FHL ++T P G A + SP
Sbjct: 363 FHLYINTAPCGDARIFSP 380


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 21.8 bits (44), Expect = 3.0
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -3

Query: 312 LSTSNSNRSPIRLGTGRPSPVTMRTL 235
           LST+  ++ P   G  + SPV+M  L
Sbjct: 372 LSTALMSQPPPNFGVSQVSPVSMSAL 397


>DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1
           precursor protein.
          Length = 223

 Score = 21.4 bits (43), Expect = 3.9
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -2

Query: 382 ADDSTNWNLATTLPPD 335
           +D+ +NWN  T L P+
Sbjct: 64  SDEGSNWNWNTLLRPN 79


>AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-rich
           protein precursor protein.
          Length = 223

 Score = 21.4 bits (43), Expect = 3.9
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -2

Query: 382 ADDSTNWNLATTLPPD 335
           +D+ +NWN  T L P+
Sbjct: 64  SDEGSNWNWNTLLRPN 79


>AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.
          Length = 223

 Score = 21.4 bits (43), Expect = 3.9
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -2

Query: 382 ADDSTNWNLATTLPPD 335
           +D+ +NWN  T L P+
Sbjct: 64  SDEGSNWNWNTLLRPN 79


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 9/31 (29%), Positives = 18/31 (58%)
 Frame = -2

Query: 256  PSDDENLALYSLYKQATIGDVNIAQPSGLVE 164
            P+D+  +  Y+++ +   GD + AQ S  V+
Sbjct: 1390 PTDNAPIHGYTIHYKPEFGDWDTAQISSTVQ 1420


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 20.2 bits (40), Expect = 9.1
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = +3

Query: 90  FAMYCFLASSWEMP 131
           FA+Y  +  SW +P
Sbjct: 242 FAVYVLVNGSWSLP 255


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 20.2 bits (40), Expect = 9.1
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = +3

Query: 222 REYSARFSSSL 254
           R YS RFSSS+
Sbjct: 22  RRYSKRFSSSI 32


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 20.2 bits (40), Expect = 9.1
 Identities = 7/24 (29%), Positives = 12/24 (50%)
 Frame = -3

Query: 186 PSPAVLWRAPSGRHGTVAKASPKT 115
           P+P   W A +G    +  + P+T
Sbjct: 265 PTPEYRWYAQTGSEPMLVLSGPRT 288


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 20.2 bits (40), Expect = 9.1
 Identities = 7/24 (29%), Positives = 12/24 (50%)
 Frame = -3

Query: 186 PSPAVLWRAPSGRHGTVAKASPKT 115
           P+P   W A +G    +  + P+T
Sbjct: 265 PTPEYRWYAQTGSEPMLVLSGPRT 288


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 20.2 bits (40), Expect = 9.1
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = -2

Query: 346 LPPDLKR*HKMSLDEQFKQVADKVRN 269
           L  ++KR  ++      KQVAD++RN
Sbjct: 384 LDEEMKRTDELLYQMIPKQVADRLRN 409


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,010
Number of Sequences: 438
Number of extensions: 3089
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used:  9885360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)