Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_pT_O15
         (558 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_06_0760 + 27017956-27018433,27018487-27019234,27023760-270243...    30   1.4  
11_01_0758 + 6362500-6363233,6363709-6365500                           27   7.7  
03_01_0207 - 1633177-1633372,1633623-1633688,1633778-1633859,163...    27   7.7  
01_01_0450 - 3344203-3344259,3344339-3344506,3344743-3344956,334...    27   7.7  

>11_06_0760 +
           27017956-27018433,27018487-27019234,27023760-27024378,
           27030755-27032440
          Length = 1176

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
 Frame = -1

Query: 288 LGVQLFNKIPQ-NVQLLPVHRFKKTVKERLCNKAYYKVKDFLLDGTTWE 145
           + +Q  NK  + N+Q +      K ++E L  K Y+ + D +   TTWE
Sbjct: 376 INIQTMNKPGEKNIQTMKRDGLSKLLQEHLNQKRYFLLIDDVWSATTWE 424


>11_01_0758 + 6362500-6363233,6363709-6365500
          Length = 841

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 11/45 (24%), Positives = 25/45 (55%)
 Frame = -1

Query: 258 QNVQLLPVHRFKKTVKERLCNKAYYKVKDFLLDGTTWE*GVRSWP 124
           Q  ++  VH   + +++ L +K Y+ + + L D + W+   R++P
Sbjct: 223 QQPEVCEVHNLLEDLRKHLLDKRYFIIVEDLWDTSVWDVVSRAFP 267


>03_01_0207 -
           1633177-1633372,1633623-1633688,1633778-1633859,
           1633942-1634037,1634413-1634518,1634602-1634661,
           1635114-1635234,1635929-1636040,1636118-1636217,
           1636328-1636382,1636489-1636595,1636798-1636850,
           1636989-1637114,1637909-1638065,1638226-1638421,
           1638917-1639073,1639139-1639379,1639475-1639605,
           1639704-1639826,1639929-1639984,1640610-1640767,
           1640847-1640984,1641070-1641123
          Length = 896

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 15/51 (29%), Positives = 28/51 (54%)
 Frame = +3

Query: 282 HPAPXKELLIFLIRAAGNASLCLFLVFTLCKSQTLGNSTMFLRTYNKFSKM 434
           HP+P KE+L  L+R A +  L L +  +   +++L N+      +NK  ++
Sbjct: 657 HPSPTKEMLEPLLRTASSVGLNLDVSSSKALAESLDNAKNDDPYFNKLIRI 707


>01_01_0450 - 3344203-3344259,3344339-3344506,3344743-3344956,
            3345039-3345101,3345582-3345769,3345846-3346029,
            3346535-3346606,3346676-3346787,3346878-3346953,
            3347050-3347100,3347179-3347260,3347331-3347567,
            3347650-3347772,3348141-3348326,3348680-3349625,
            3350426-3350551,3350683-3350811,3350918-3351049,
            3351167-3351301,3351450-3351575,3352080-3352148,
            3352149-3352205,3352302-3352436,3352600-3352704,
            3352841-3352906,3353333-3353503,3353806-3353983
          Length = 1395

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = +1

Query: 379  RLWGILQCFYARTINFQKCIGTLKL 453
            R+WG   C +A  ++F +  GT+KL
Sbjct: 1001 RIWGASLCGWAGPVSFHEASGTVKL 1025


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,915,282
Number of Sequences: 37544
Number of extensions: 220316
Number of successful extensions: 355
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 353
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 355
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1269546012
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)