Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P15_pT_O13
(742 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0411 + 29151647-29151790,29152974-29153039,29153398-291535... 163 1e-40
05_06_0265 - 26759960-26760088,26760315-26760386,26760457-267605... 143 1e-34
04_04_1432 - 33558895-33559023,33559215-33559286,33559405-335594... 136 1e-32
04_04_1431 - 33551127-33551300,33551362-33551433,33551508-335515... 111 7e-25
01_06_0363 - 28745581-28745709,28746043-28746114,28746373-287464... 84 1e-16
07_03_1039 - 23454130-23454552,23454859-23455536 35 0.059
09_04_0692 + 19502878-19502920,19505011-19505104,19505196-195052... 29 2.9
08_02_0370 - 16333471-16333526,16333821-16333912,16334553-163346... 29 5.1
04_03_0282 - 13874547-13874738,13875047-13875134,13875222-138753... 28 6.8
07_03_1258 + 25244863-25245282,25246419-25246568,25246665-252468... 28 9.0
>01_06_0411 +
29151647-29151790,29152974-29153039,29153398-29153538,
29153638-29153724,29153968-29154084,29154177-29154265,
29154510-29154561,29154667-29154762,29154835-29154879,
29155002-29155091,29155164-29155235,29155490-29155618
Length = 375
Score = 163 bits (396), Expect = 1e-40
Identities = 84/241 (34%), Positives = 138/241 (57%), Gaps = 2/241 (0%)
Frame = -2
Query: 741 GMPCWYRRPEVGITCAFXDSLLIHSSLFEFXKTNFRTNPNYMKMFELFNETLWSTSMGQH 562
G PCW+R P+VG+ A D +++ + + + +F+ Y+ + +LFNE + T+ GQ
Sbjct: 137 GQPCWFRVPQVGLI-AVNDGIILRNHISRILQRHFKGKLYYVDLIDLFNEVEFKTASGQL 195
Query: 561 LDHVTGNR-KTDYSSFTLDRXXXXXXXXXXXXXYNLPVSLGLLLA-ENVDEKIYKSAQDI 388
LD +T + + D + + L + LPV+ LLL+ EN+D + ++I
Sbjct: 196 LDLITTHEGEKDLTKYNLTVHRRIVQYKTAYYSFYLPVACALLLSGENLDN--FGDVKNI 253
Query: 387 CLEIGTMFQIQDDFIDCFGDEIKTGKVGTDIQERKCTWLAVQALQRCTEAQRTVFKACYG 208
+E+GT FQ+QDD++DC+GD GK+GTDI++ KC+WL VQAL+R E Q+ + YG
Sbjct: 254 LVEMGTYFQVQDDYLDCYGDPEFIGKIGTDIEDYKCSWLVVQALERADENQKHILFENYG 313
Query: 207 SSEPAHVERIKRLYEDLHLPQIYKHQEKAMYDNIIRQIENIPIEAARVRFKKLLEMTDKR 28
+P V ++K LY++L+L ++ E+ Y+ +I IE P +A + K L KR
Sbjct: 314 KPDPECVAKVKDLYKELNLEAVFHEYERESYNKLIADIEAHPNKAVQNVLKSFLHKIYKR 373
Query: 27 Q 25
Q
Sbjct: 374 Q 374
>05_06_0265 -
26759960-26760088,26760315-26760386,26760457-26760546,
26760649-26760693,26760785-26760880,26760980-26761031,
26761209-26761297,26761388-26761504,26761680-26761737,
26761834-26761936,26762027-26762051,26762677-26762826
Length = 341
Score = 143 bits (347), Expect = 1e-34
Identities = 76/225 (33%), Positives = 122/225 (54%), Gaps = 1/225 (0%)
Frame = -2
Query: 696 AFXDSLLIHSSLFEFXKTNFRTNPNYMKMFELFNETLWSTSMGQHLDHVTGNR-KTDYSS 520
A D +++ + + + +FR Y + +LFNE + T+ GQ LD +T + + D +
Sbjct: 117 AINDGIILRNHITRMLRLHFRGKLYYADLLDLFNEVEFKTASGQLLDLITTHEGEKDLNK 176
Query: 519 FTLDRXXXXXXXXXXXXXYNLPVSLGLLLAENVDEKIYKSAQDICLEIGTMFQIQDDFID 340
+ + + LPV+ LLL+ D Y + +DI +++G FQ+QDD++D
Sbjct: 177 YNIGVHRRIVQYKTSYYSFYLPVACALLLSGE-DLTKYGAVEDILVKMGIYFQVQDDYLD 235
Query: 339 CFGDEIKTGKVGTDIQERKCTWLAVQALQRCTEAQRTVFKACYGSSEPAHVERIKRLYED 160
C+GD GK+GTDI++ KC+WL VQAL+R E+Q++V YG +PA V ++K LY +
Sbjct: 236 CYGDPKFIGKIGTDIEDYKCSWLVVQALERADESQKSVLFENYGKKDPACVAKVKSLYRE 295
Query: 159 LHLPQIYKHQEKAMYDNIIRQIENIPIEAARVRFKKLLEMTDKRQ 25
L+L ++ E Y +I IE P A + K L KRQ
Sbjct: 296 LNLEAVFLDYENESYKKLIADIEAQPSIAVQNVLKSFLHKIYKRQ 340
>04_04_1432 -
33558895-33559023,33559215-33559286,33559405-33559494,
33559574-33559618,33559693-33559788,33559905-33559956,
33560044-33560132,33560226-33560342,33560448-33560534,
33560646-33560761,33560854-33560878,33561816-33562121
Length = 407
Score = 136 bits (330), Expect = 1e-32
Identities = 76/237 (32%), Positives = 122/237 (51%), Gaps = 1/237 (0%)
Frame = -2
Query: 732 CWYRRPEVGITCAFXDSLLIHSSLFEFXKTNFRTNPNYMKMFELFNETLWSTSMGQHLDH 553
CWY+ P VG++ A D +L+ + K F+ ++ + EL+NE T+MGQ LD
Sbjct: 172 CWYKLPTVGMS-AINDGVLLKCHVQAIIKRYFKEKFYFLDLMELWNEIGLQTAMGQMLDL 230
Query: 552 VTGNRKT-DYSSFTLDRXXXXXXXXXXXXXYNLPVSLGLLLAENVDEKIYKSAQDICLEI 376
+T + D + + + + LPV+ LLL Y +++ +E+
Sbjct: 231 ITTHTGAKDLARYRIQGYRRIVKYKTSYYSFYLPVACALLL-NGARLSDYVELKNVLIEM 289
Query: 375 GTMFQIQDDFIDCFGDEIKTGKVGTDIQERKCTWLAVQALQRCTEAQRTVFKACYGSSEP 196
G FQIQDD++DCFGD GKVGTDI++ KC+WL VQA++ E + + YG S+P
Sbjct: 290 GVYFQIQDDYLDCFGDPEVIGKVGTDIEDYKCSWLIVQAMELANENEMKILYENYGKSDP 349
Query: 195 AHVERIKRLYEDLHLPQIYKHQEKAMYDNIIRQIENIPIEAARVRFKKLLEMTDKRQ 25
V +K +Y +L L I+ E +Y +++ I+ A R K L+ +R+
Sbjct: 350 KCVAEVKSVYRELDLQDIFLEYESRVYKHLVSTIDAETDRAIRDILKSFLKKIYRRK 406
>04_04_1431 -
33551127-33551300,33551362-33551433,33551508-33551597,
33551671-33551715,33551785-33551880,33552245-33552296,
33552412-33552500,33552590-33552887,33553007-33553109,
33553328-33553352,33553503-33553763
Length = 434
Score = 111 bits (266), Expect = 7e-25
Identities = 62/189 (32%), Positives = 97/189 (51%), Gaps = 1/189 (0%)
Frame = -2
Query: 714 EVGITCAFXDSLLIHSSLFEFXKTNFRTNPNYMKMFELFNETLWSTSMGQHLDHV-TGNR 538
+VG+ D +++ + K FR P ++ + E+++E TS+GQ LD + T
Sbjct: 190 QVGLR-GINDGIILKCHILIMIKKYFREKPYFLDILEIWSEIALQTSLGQMLDLISTHTG 248
Query: 537 KTDYSSFTLDRXXXXXXXXXXXXXYNLPVSLGLLLAENVDEKIYKSAQDICLEIGTMFQI 358
D + ++++ + LPV+ LLL+ E + +DI +E+G FQI
Sbjct: 249 ADDLAKYSIEGYRRIVKYKTAYYSFYLPVANALLLSGAKLED-FSGLKDILIEMGIYFQI 307
Query: 357 QDDFIDCFGDEIKTGKVGTDIQERKCTWLAVQALQRCTEAQRTVFKACYGSSEPAHVERI 178
QDD++DCF D GK+GTDI++ KC+WL VQAL Q V YG + + V +
Sbjct: 308 QDDYLDCFADPNTIGKIGTDIEDHKCSWLIVQALGHADNNQIEVLHRNYGKKDSSSVSEV 367
Query: 177 KRLYEDLHL 151
KR Y L L
Sbjct: 368 KRTYAALDL 376
>01_06_0363 -
28745581-28745709,28746043-28746114,28746373-28746417,
28746523-28746618,28747029-28747080,28747232-28747305,
28747386-28747502,28747844-28747930,28748186-28748281,
28748508-28748654
Length = 304
Score = 83.8 bits (198), Expect = 1e-16
Identities = 50/145 (34%), Positives = 74/145 (51%), Gaps = 1/145 (0%)
Frame = -2
Query: 741 GMPCWYRRPEVGITCAFXDSLLIHSSLFEFXKTNFRTNPNYMKMFELFNETLWSTSMGQH 562
G PCW+R P+VG+ A D L++ S + + FR Y+ + +LFNE T+ GQ
Sbjct: 101 GKPCWFRLPKVGLI-AINDGLVLRSQISRIFRRYFRGKSYYVDLLDLFNEVEIQTTSGQL 159
Query: 561 LDHVTGNRKTDYSSFTLDRXXXXXXXXXXXXXYNLPVSLGLLLA-ENVDEKIYKSAQDIC 385
LD +T N L++ + LPV+ LLL E++D Y + I
Sbjct: 160 LDQITTNEGRK----DLNKYRRIVEYKTAYYSFYLPVACALLLFDESLDN--YAQVKHIL 213
Query: 384 LEIGTMFQIQDDFIDCFGDEIKTGK 310
+E+G FQ QDD++DCFG+ GK
Sbjct: 214 VEMGVYFQSQDDYLDCFGEPEIIGK 238
Score = 54.8 bits (126), Expect = 7e-08
Identities = 27/74 (36%), Positives = 38/74 (51%)
Frame = -2
Query: 249 CTEAQRTVFKACYGSSEPAHVERIKRLYEDLHLPQIYKHQEKAMYDNIIRQIENIPIEAA 70
C + K YG S+PA V ++K LY +LHL +++ E+ Y+ +I IE P EA
Sbjct: 229 CFGEPEIIGKENYGKSDPACVAKVKDLYNELHLQRVFSEYERESYEKLISAIEAQPNEAV 288
Query: 69 RVRFKKLLEMTDKR 28
R K L KR
Sbjct: 289 RAVLKSFLHKIYKR 302
>07_03_1039 - 23454130-23454552,23454859-23455536
Length = 366
Score = 35.1 bits (77), Expect = 0.059
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = -2
Query: 453 VSLGLLLAENVDEKIYKSAQDICLEIGTMFQIQDDFIDCFGDEIKTGK-VGTDIQERKCT 277
V +G +L DE+I +S + IG +FQ+ DD +D + GK G D+ K T
Sbjct: 260 VVIGAILGGGSDEQI-ESLRMYARSIGLLFQVVDDILDVTKSSEELGKTAGKDLASDKTT 318
Query: 276 WLAVQALQRCTE 241
+ + L++ E
Sbjct: 319 YPKLLGLEKSRE 330
>09_04_0692 +
19502878-19502920,19505011-19505104,19505196-19505227,
19505833-19506074,19506758-19506994,19508283-19508396
Length = 253
Score = 29.5 bits (63), Expect = 2.9
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +1
Query: 55 FKAHAGGLYWYIFNLSYNIVVH 120
F+ GG+YWY F YN+V+H
Sbjct: 231 FRDFTGGMYWYAF--IYNVVLH 250
>08_02_0370 -
16333471-16333526,16333821-16333912,16334553-16334671,
16335152-16335226,16335328-16335393,16335507-16335563,
16335640-16335689,16335774-16335944,16337057-16337183,
16337658-16338017
Length = 390
Score = 28.7 bits (61), Expect = 5.1
Identities = 16/70 (22%), Positives = 35/70 (50%)
Frame = -2
Query: 447 LGLLLAENVDEKIYKSAQDICLEIGTMFQIQDDFIDCFGDEIKTGKVGTDIQERKCTWLA 268
L +++ E + + +++ + T++Q+ + ID G E+K ++ IQE C L
Sbjct: 215 LPIIVLEMPSVLLMAAIRNVHIARPTIYQVVKEMIDKMGYEVKLVRINKRIQEAYCAELF 274
Query: 267 VQALQRCTEA 238
+ + TE+
Sbjct: 275 LTKVGDHTES 284
>04_03_0282 -
13874547-13874738,13875047-13875134,13875222-13875328,
13875487-13875542,13875853-13875882,13877397-13877505,
13877774-13878318,13879584-13879668,13879753-13879914,
13880293-13880434,13880524-13880624,13882307-13882489
Length = 599
Score = 28.3 bits (60), Expect = 6.8
Identities = 15/61 (24%), Positives = 30/61 (49%)
Frame = -2
Query: 195 AHVERIKRLYEDLHLPQIYKHQEKAMYDNIIRQIENIPIEAARVRFKKLLEMTDKRQHEA 16
A+ R R Y+D++ Q ++H EK+ +I +I IE +++ + ++ A
Sbjct: 319 ANSRRFPRSYQDVNTVQAHEHTEKSNRSRLIGRINFGDIERNQLQVRDVIRQKSSPNLPA 378
Query: 15 R 13
R
Sbjct: 379 R 379
>07_03_1258 +
25244863-25245282,25246419-25246568,25246665-25246877,
25246979-25247068,25247311-25247424,25247881-25248150,
25248251-25248407,25248691-25248741,25248742-25248819,
25249357-25249457,25249832-25250002,25250136-25250210,
25251527-25251793
Length = 718
Score = 27.9 bits (59), Expect = 9.0
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +1
Query: 277 STFALLYICTNFTSFYFIT 333
STF L+Y+ +F SF+FIT
Sbjct: 467 STFGLVYLIYSFCSFHFIT 485
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,205,778
Number of Sequences: 37544
Number of extensions: 368845
Number of successful extensions: 748
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 730
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 743
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1957111448
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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