Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P15_pT_O13
(742 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81106-1|CAB03221.2| 352|Caenorhabditis elegans Hypothetical pr... 133 1e-31
Z29095-13|CAA82357.1| 810|Caenorhabditis elegans Hypothetical p... 29 3.5
Z22181-15|CAA80191.1| 810|Caenorhabditis elegans Hypothetical p... 29 3.5
Z22181-14|CAI46590.1| 516|Caenorhabditis elegans Hypothetical p... 29 3.5
U80443-7|AAB37678.2| 393|Caenorhabditis elegans Coenzyme q (ubi... 29 3.5
AF326940-1|AAG49390.1| 810|Caenorhabditis elegans replication l... 29 3.5
AC025721-13|AAR85897.1| 139|Caenorhabditis elegans Hypothetical... 29 4.6
Z81050-12|CAN86586.1| 420|Caenorhabditis elegans Hypothetical p... 28 6.0
Z81050-11|CAN86585.1| 399|Caenorhabditis elegans Hypothetical p... 28 6.0
U41278-4|AAK31513.3| 928|Caenorhabditis elegans Hypothetical pr... 28 6.0
>Z81106-1|CAB03221.2| 352|Caenorhabditis elegans Hypothetical
protein R06C1.2 protein.
Length = 352
Score = 133 bits (321), Expect = 1e-31
Identities = 77/227 (33%), Positives = 123/227 (54%), Gaps = 7/227 (3%)
Frame = -2
Query: 741 GMPCWYRRPEVGITCAFXDSLLIHSSLFEFXKTNFRTNPNYMKMFELFNETLWSTSMGQH 562
G PCW+RR VG++ A D+ ++ S + + + + N ++ E + ++ T +GQ
Sbjct: 110 GKPCWFRREGVGMS-AINDAFIMDSFVEDILRLALPGHVNLDRLCEAYRKSKQKTLIGQF 168
Query: 561 LDHVTGNRKTDYSSFTLDRXXXXXXXXXXXXXYNLPVSLGLLLAENVDEKIYKSAQDICL 382
LD + N+ SSFT DR P+ + L++++ + + S + +
Sbjct: 169 LDTSSVNQ---ISSFTWDRYELMVENKTSHYTVFHPIQMALIISDVL--AYHGSVKKVAY 223
Query: 381 EIGTMFQIQDDFIDCFGDEIKTGKVGTDIQERKCTWLAVQALQRCTEAQR-------TVF 223
+IG +FQ QDDF+D +GD TGK+GTDIQ+ KCTWLAV+ALQ+ + F
Sbjct: 224 QIGFLFQSQDDFLDVYGDPKITGKIGTDIQDGKCTWLAVRALQKMHKTPEKWGAKLIEEF 283
Query: 222 KACYGSSEPAHVERIKRLYEDLHLPQIYKHQEKAMYDNIIRQIENIP 82
K +GS +P VE+IKR+Y++L L Q ++ EK I + I IP
Sbjct: 284 KTSFGSVDPEKVEKIKRIYDELQLKQEFRRFEKHFSGEIKKSISEIP 330
>Z29095-13|CAA82357.1| 810|Caenorhabditis elegans Hypothetical
protein ZK632.1a protein.
Length = 810
Score = 29.1 bits (62), Expect = 3.5
Identities = 19/49 (38%), Positives = 28/49 (57%)
Frame = -3
Query: 356 RTIS*TASVMK*KLVKLVQIYKSANVLGWQFKRCSAVLKHNVQYSKPVM 210
+TIS T + +K L I +AN + ++ R S LK+NVQ S P+M
Sbjct: 481 QTISITKAGVKATLNARASILAAANPVNGRYDR-SRPLKYNVQMSAPIM 528
>Z22181-15|CAA80191.1| 810|Caenorhabditis elegans Hypothetical
protein ZK632.1a protein.
Length = 810
Score = 29.1 bits (62), Expect = 3.5
Identities = 19/49 (38%), Positives = 28/49 (57%)
Frame = -3
Query: 356 RTIS*TASVMK*KLVKLVQIYKSANVLGWQFKRCSAVLKHNVQYSKPVM 210
+TIS T + +K L I +AN + ++ R S LK+NVQ S P+M
Sbjct: 481 QTISITKAGVKATLNARASILAAANPVNGRYDR-SRPLKYNVQMSAPIM 528
>Z22181-14|CAI46590.1| 516|Caenorhabditis elegans Hypothetical
protein ZK632.1b protein.
Length = 516
Score = 29.1 bits (62), Expect = 3.5
Identities = 19/49 (38%), Positives = 28/49 (57%)
Frame = -3
Query: 356 RTIS*TASVMK*KLVKLVQIYKSANVLGWQFKRCSAVLKHNVQYSKPVM 210
+TIS T + +K L I +AN + ++ R S LK+NVQ S P+M
Sbjct: 187 QTISITKAGVKATLNARASILAAANPVNGRYDR-SRPLKYNVQMSAPIM 234
>U80443-7|AAB37678.2| 393|Caenorhabditis elegans Coenzyme q
(ubiquinone) biosynthesisprotein 1 protein.
Length = 393
Score = 29.1 bits (62), Expect = 3.5
Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = -2
Query: 438 LLAENVDEKIYKSAQDICLEIGTMFQIQDDFIDCFGDEIKTGK-VGTDIQ 292
+LA+ D K+++ A + +G FQ+ DD +D + GK V D++
Sbjct: 256 ILADGSDLKLHEIAFEYGRNLGIAFQLADDLLDFIATADEMGKPVAADLK 305
>AF326940-1|AAG49390.1| 810|Caenorhabditis elegans replication
licensing factor MCM2/3/5-type protein protein.
Length = 810
Score = 29.1 bits (62), Expect = 3.5
Identities = 19/49 (38%), Positives = 28/49 (57%)
Frame = -3
Query: 356 RTIS*TASVMK*KLVKLVQIYKSANVLGWQFKRCSAVLKHNVQYSKPVM 210
+TIS T + +K L I +AN + ++ R S LK+NVQ S P+M
Sbjct: 481 QTISITKAGVKATLNARASILAAANPVNGRYDR-SRPLKYNVQMSAPIM 528
>AC025721-13|AAR85897.1| 139|Caenorhabditis elegans Hypothetical
protein Y48G8AL.15 protein.
Length = 139
Score = 28.7 bits (61), Expect = 4.6
Identities = 13/29 (44%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = -2
Query: 147 QIY-KHQEKAMYDNIIRQIENIPIEAARV 64
Q+Y +HQ K YD ++R I + P+ A RV
Sbjct: 56 QLYAQHQGKFFYDRLVRHISSGPVIAMRV 84
>Z81050-12|CAN86586.1| 420|Caenorhabditis elegans Hypothetical
protein C50B6.14b protein.
Length = 420
Score = 28.3 bits (60), Expect = 6.0
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = -2
Query: 189 VERIKRLYEDLHLPQIYKHQEKAMYDNIIRQIENI 85
+ER +R+ +DLHL I K DNI++ IE++
Sbjct: 383 LERQQRMQKDLHLLYIAPLVAKTPKDNIVQIIEDV 417
>Z81050-11|CAN86585.1| 399|Caenorhabditis elegans Hypothetical
protein C50B6.14a protein.
Length = 399
Score = 28.3 bits (60), Expect = 6.0
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = -2
Query: 189 VERIKRLYEDLHLPQIYKHQEKAMYDNIIRQIENI 85
+ER +R+ +DLHL I K DNI++ IE++
Sbjct: 362 LERQQRMQKDLHLLYIAPLVAKTPKDNIVQIIEDV 396
>U41278-4|AAK31513.3| 928|Caenorhabditis elegans Hypothetical
protein F33G12.5 protein.
Length = 928
Score = 28.3 bits (60), Expect = 6.0
Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 12/75 (16%)
Frame = -2
Query: 195 AHVERIKRLYEDLHLPQIYKHQ------------EKAMYDNIIRQIENIPIEAARVRFKK 52
A RI +L +D+ + +Y Q E Y+N+ R++EN+ E +R+
Sbjct: 251 AQENRISQLMKDIQMKDLYLKQLGATGPPGGIPNENTNYENLQRELENVKAEKSRL---- 306
Query: 51 LLEMTDKRQHEARRE 7
L+E + H A RE
Sbjct: 307 LVESATLKAHYADRE 321
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,860,248
Number of Sequences: 27780
Number of extensions: 347670
Number of successful extensions: 1000
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 955
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 998
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1745954468
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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