Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P15_pT_N20
(753 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_01_0118 - 871481-872606,872795-872950,873051-873817 32 0.43
08_02_0502 + 17844775-17845092,17845528-17845634,17846039-178464... 32 0.56
11_01_0738 - 6218730-6220173,6221969-6223056 31 0.74
01_06_0310 - 28376378-28376607,28376789-28376897 31 0.74
01_04_0095 + 15979884-15980234 30 1.7
01_01_0099 - 751627-752126,752866-753056,753188-753945 30 1.7
07_01_1022 - 8815675-8816809,8819696-8819907 30 2.3
02_01_0182 + 1245577-1245670,1245928-1246017,1246258-1246290,124... 30 2.3
01_01_0097 - 741881-742977,743100-743320,743438-744156 30 2.3
08_02_0825 - 21570628-21570715,21571436-21571812,21572364-215727... 29 3.0
03_02_0579 - 9606317-9606892,9607571-9607799,9607902-9608011,960... 29 3.0
01_01_0487 - 3591171-3592313,3593522-3593800,3594688-3595008 29 3.0
12_02_0881 - 23970143-23970433,23970814-23971116,23971490-239720... 29 4.0
10_08_0669 + 19742140-19742189,19742886-19742923,19744260-197444... 29 4.0
08_02_1411 + 26880766-26880911,26881000-26881097,26881207-268812... 29 4.0
01_01_0103 - 773727-774737,774797-774813,774852-775078,777465-77... 29 4.0
09_06_0259 - 21906612-21907109 29 5.2
01_01_0116 - 861044-861405,861495-861633,862078-862501,862634-86... 28 6.9
01_01_0115 - 856957-858055,858479-858538,858802-859583 28 6.9
08_01_0244 + 2016548-2017101,2017392-2019681,2019785-2019817 28 9.2
01_01_0112 - 838809-839748,839781-839908,840203-840274,840306-84... 28 9.2
>01_01_0118 - 871481-872606,872795-872950,873051-873817
Length = 682
Score = 32.3 bits (70), Expect = 0.43
Identities = 20/62 (32%), Positives = 32/62 (51%)
Frame = +1
Query: 241 GHGGYSSEIRVEILPGRVVHRHVTGVTLFPSCTNDEYVLAGVTRGRGRHVVLAVRQRGVA 420
G GGY S + +LPG +H + + + +C +E++ T GR HV + VR G
Sbjct: 366 GQGGYGSVYKGVLLPGD-LHVAIKILNGYSNCNGEEFISEVATIGRIHHVNV-VRLVGFC 423
Query: 421 AE 426
+E
Sbjct: 424 SE 425
>08_02_0502 +
17844775-17845092,17845528-17845634,17846039-17846492,
17846623-17846694,17846804-17846925,17847079-17847294,
17847392-17847500,17847618-17847730,17847916-17848063,
17848274-17848396
Length = 593
Score = 31.9 bits (69), Expect = 0.56
Identities = 13/45 (28%), Positives = 24/45 (53%)
Frame = +1
Query: 181 LRIVGDKFDGWRDVLNCNRPGHGGYSSEIRVEILPGRVVHRHVTG 315
+ +VGD W+D + C+ G Y +EIR+ G+ ++ + G
Sbjct: 470 VELVGDFTSNWKDKVKCDHKGGSRYEAEIRLR--HGKYYYKFIAG 512
>11_01_0738 - 6218730-6220173,6221969-6223056
Length = 843
Score = 31.5 bits (68), Expect = 0.74
Identities = 18/49 (36%), Positives = 24/49 (48%)
Frame = -2
Query: 335 QDGKRVTPVTWRCTTRPGRISTRISLLYPPCPGRLQFKTSRQPSNLSPT 189
+DGK V C P + I++LY CP R TS+ PSN + T
Sbjct: 312 RDGKHTAYVA--CLVAP--VVAYIAILYIACPSRSPSSTSKSPSNTNTT 356
>01_06_0310 - 28376378-28376607,28376789-28376897
Length = 112
Score = 31.5 bits (68), Expect = 0.74
Identities = 15/54 (27%), Positives = 24/54 (44%)
Frame = -1
Query: 429 NLRSDASLSHGEHHVAAAPARNASENVLIVCARWKEGHTGYMAVYNPSRQDLHA 268
+L + A+ H AA P R+ ++ W E GY+ VY+ +L A
Sbjct: 6 SLLAAAAADDARHAQAAGPRRDDDHKAWLLRRAWHEAREGYVVVYDGGGNELSA 59
>01_04_0095 + 15979884-15980234
Length = 116
Score = 30.3 bits (65), Expect = 1.7
Identities = 18/50 (36%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Frame = -3
Query: 292 PVPAGSPRESHCCTLRARDDYNSKRLASRQTCH-QLYEELPAGRGRAGPC 146
P P SP S CC R+R S L + H +L E + G AG C
Sbjct: 33 PCPGASPMASPCCRTRSRARTGSTSLGAVAHRHVELREGVGHGGDEAGAC 82
>01_01_0099 - 751627-752126,752866-753056,753188-753945
Length = 482
Score = 30.3 bits (65), Expect = 1.7
Identities = 23/62 (37%), Positives = 32/62 (51%)
Frame = +1
Query: 241 GHGGYSSEIRVEILPGRVVHRHVTGVTLFPSCTNDEYVLAGVTRGRGRHVVLAVRQRGVA 420
G GGY S + +LPG VH V + + +C +E++ T GR HV + VR G
Sbjct: 324 GQGGYGSVYKGVLLPGD-VHVAVKVLGNY-NCNGEEFISEVSTIGRIHHVNV-VRLVGFC 380
Query: 421 AE 426
AE
Sbjct: 381 AE 382
>07_01_1022 - 8815675-8816809,8819696-8819907
Length = 448
Score = 29.9 bits (64), Expect = 2.3
Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Frame = -2
Query: 392 TTWRPRPRVTPARTYSSFVQDGKRV-TPVTWRCT-TRPGR 279
T+ RPRPR T+S +GK P +W CT T P R
Sbjct: 305 TSGRPRPRTLVLATFSPSHFEGKPAENPTSWVCTKTEPYR 344
>02_01_0182 +
1245577-1245670,1245928-1246017,1246258-1246290,
1246451-1246483,1246657-1246689,1246872-1246904,
1247073-1247105,1247237-1247286
Length = 132
Score = 29.9 bits (64), Expect = 2.3
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = +2
Query: 407 NEASLRRFTRSKREVSFSSAESCFIFNKGAAGRSIAN 517
N SL+ SKR + F SA SC IF G +G + N
Sbjct: 34 NIFSLKYTPFSKRGLKFGSASSCPIFGSGRSGYNSVN 70
>01_01_0097 - 741881-742977,743100-743320,743438-744156
Length = 678
Score = 29.9 bits (64), Expect = 2.3
Identities = 22/62 (35%), Positives = 32/62 (51%)
Frame = +1
Query: 241 GHGGYSSEIRVEILPGRVVHRHVTGVTLFPSCTNDEYVLAGVTRGRGRHVVLAVRQRGVA 420
G GGY S + ILPG VH + ++ + +C +E++ T G HV + VR G
Sbjct: 375 GQGGYGSVFKGVILPGD-VHVAIKMLSNY-NCNGEEFISEVSTIGSIHHVNV-VRLVGYC 431
Query: 421 AE 426
AE
Sbjct: 432 AE 433
>08_02_0825 -
21570628-21570715,21571436-21571812,21572364-21572755,
21573943-21574311,21574395-21574580,21574709-21574845,
21575030-21575089,21575206-21575277,21575399-21575542,
21575702-21575773,21575928-21576060,21576157-21576247
Length = 706
Score = 29.5 bits (63), Expect = 3.0
Identities = 20/80 (25%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Frame = -1
Query: 693 SLPDLILXNHNVSMXRPPSAAPVPVTEDAD----ALASRINKTLGSWPILQLTDTNDDRE 526
+L ++L N+N++ PP +P + D + R+ TLG L+ N++
Sbjct: 95 NLEQVLLQNNNITGRLPPELGALPRLQTLDLSNNRFSGRVPDTLGRLSTLRYLRLNNNSL 154
Query: 525 LASFAMLLPAAPLLNIKQLS 466
+F L P L+ LS
Sbjct: 155 SGAFPSSLAKIPQLSFLDLS 174
>03_02_0579 -
9606317-9606892,9607571-9607799,9607902-9608011,
9608898-9609275,9609380-9609658,9610044-9610168,
9610269-9610335,9610582-9612006
Length = 1062
Score = 29.5 bits (63), Expect = 3.0
Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = -1
Query: 471 LSADENDTSLLDLVNLRSDASLSHGEH-HVAAAPARNASENVLI 343
LS DEN + + + +DAS++H EH +VA A+ VL+
Sbjct: 435 LSMDENLQMIAKIAAVCNDASIAHSEHQYVATGMPTEAALKVLV 478
>01_01_0487 - 3591171-3592313,3593522-3593800,3594688-3595008
Length = 580
Score = 29.5 bits (63), Expect = 3.0
Identities = 18/56 (32%), Positives = 24/56 (42%)
Frame = -3
Query: 316 HRLHGGVQPVPAGSPRESHCCTLRARDDYNSKRLASRQTCHQLYEELPAGRGRAGP 149
H H V PVP +P S RD Y + +T HQ Y+ P + +A P
Sbjct: 297 HLPHSQVPPVPPSAPVPS--VPALPRDPYYAPPAQPTETMHQQYQAPPVPQPQAPP 350
>12_02_0881 -
23970143-23970433,23970814-23971116,23971490-23972077,
23972606-23972761,23972852-23972910,23974294-23974561
Length = 554
Score = 29.1 bits (62), Expect = 4.0
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = -3
Query: 274 PRESHCCTLRARDDYNSKRLASRQ 203
P+ HC +LR D+Y+S LA +Q
Sbjct: 188 PKGLHCLSLRLTDEYSSNALARKQ 211
>10_08_0669 +
19742140-19742189,19742886-19742923,19744260-19744448,
19746402-19748188
Length = 687
Score = 29.1 bits (62), Expect = 4.0
Identities = 17/61 (27%), Positives = 28/61 (45%)
Frame = -1
Query: 645 PPSAAPVPVTEDADALASRINKTLGSWPILQLTDTNDDRELASFAMLLPAAPLLNIKQLS 466
PP A + + D DALA +++ L +L T D + A AA ++++L
Sbjct: 227 PPRAGKLQMQSDLDALAGKLDLNLRDCALLIKTGVLSDATVPPVAPAAEAAAQTDVRELL 286
Query: 465 A 463
A
Sbjct: 287 A 287
>08_02_1411 + 26880766-26880911,26881000-26881097,26881207-26881274,
26881595-26881683,26881786-26882007,26883056-26883790,
26883880-26884078,26884319-26884404,26886175-26886536,
26887290-26887921
Length = 878
Score = 29.1 bits (62), Expect = 4.0
Identities = 23/78 (29%), Positives = 31/78 (39%), Gaps = 4/78 (5%)
Frame = -2
Query: 422 AATPRCRTASTTWRPRPRVTPARTYSSFVQDGKRV----TPVTWRCTTRPGRISTRISLL 255
+ TP A+ PR +Y+ +Q G V+ TT GR S+ SL
Sbjct: 801 STTPAPAAAAVAAPPREEFPDLSSYAHILQSGDLEYDFHAAVSAGLTTTAGRSSSSSSLS 860
Query: 254 YPPCPGRLQFKTSRQPSN 201
PP L +K PSN
Sbjct: 861 MPPPSEDLDYKPPFGPSN 878
>01_01_0103 -
773727-774737,774797-774813,774852-775078,777465-778237
Length = 675
Score = 29.1 bits (62), Expect = 4.0
Identities = 26/86 (30%), Positives = 42/86 (48%)
Frame = +1
Query: 169 RLVVLRIVGDKFDGWRDVLNCNRPGHGGYSSEIRVEILPGRVVHRHVTGVTLFPSCTNDE 348
+LV +R VG RD + ++ G GGY S + LPG VH + + +C ++
Sbjct: 338 KLVCVRTVG------RDDFSYSQ-GQGGYGSVYKGVFLPGD-VHVAIKMLDGNSNCNGED 389
Query: 349 YVLAGVTRGRGRHVVLAVRQRGVAAE 426
++ T GR H+ + VR G +E
Sbjct: 390 FISEVATIGRIHHINV-VRLVGFCSE 414
>09_06_0259 - 21906612-21907109
Length = 165
Score = 28.7 bits (61), Expect = 5.2
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = -3
Query: 304 GGVQPVPAGS--PRESHCCTLRARDDYNSKRLASRQTCHQLYEELPAGRGR 158
GG P A + PRE+ C R ++S+ L Q H+L E A R R
Sbjct: 33 GGAAPAAAAAVDPREAFSCNYCHRKFFSSQALGGHQNAHKL-ERTLAKRSR 82
>01_01_0116 -
861044-861405,861495-861633,862078-862501,862634-863131,
863217-863249,863490-863680,863828-864132,864196-864208
Length = 654
Score = 28.3 bits (60), Expect = 6.9
Identities = 20/62 (32%), Positives = 30/62 (48%)
Frame = +1
Query: 241 GHGGYSSEIRVEILPGRVVHRHVTGVTLFPSCTNDEYVLAGVTRGRGRHVVLAVRQRGVA 420
G GGY S + +LPG +H V + +C +E++ T G HV + VR G
Sbjct: 239 GQGGYGSVYKGVLLPGD-LHVAVKMLNGNSNCNGEEFISEVATIGMIHHVNV-VRLVGFC 296
Query: 421 AE 426
+E
Sbjct: 297 SE 298
>01_01_0115 - 856957-858055,858479-858538,858802-859583
Length = 646
Score = 28.3 bits (60), Expect = 6.9
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +1
Query: 241 GHGGYSSEIRVEILPGRVVHRHVTGVTLFPS-CTNDEYVLAGVTRGRGRHV 390
G GGY S + +LPG + HV L S C +E++ T GR H+
Sbjct: 339 GQGGYGSVYKGVLLPG---NAHVAVKVLGNSNCNGEEFISEVSTIGRIHHI 386
>08_01_0244 + 2016548-2017101,2017392-2019681,2019785-2019817
Length = 958
Score = 27.9 bits (59), Expect = 9.2
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = -1
Query: 282 QDLHANLTAVPSVPGTITIQNVSPAVKL 199
QD + ++A PS+PG +QN + +V L
Sbjct: 558 QDAISQISAAPSLPGATQLQNTTSSVPL 585
>01_01_0112 -
838809-839748,839781-839908,840203-840274,840306-840374,
840634-840698,840732-840907,841006-841757
Length = 733
Score = 27.9 bits (59), Expect = 9.2
Identities = 18/59 (30%), Positives = 28/59 (47%)
Frame = +1
Query: 214 RDVLNCNRPGHGGYSSEIRVEILPGRVVHRHVTGVTLFPSCTNDEYVLAGVTRGRGRHV 390
R + + G GGY S + +LPG +H V + + SC +E++ T G HV
Sbjct: 421 RSLQGSEKLGQGGYGSVYKGVLLPGN-IHVAVKILANY-SCDGEEFINEVSTIGSIHHV 477
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,971,514
Number of Sequences: 37544
Number of extensions: 397775
Number of successful extensions: 1425
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1377
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1424
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2004270760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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