Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P15_pT_N18
(707 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC409.18 |||phosphatidic acid phosphatase |Schizosaccharomyces... 60 3e-10
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 31 0.12
SPAC26A3.06 |||methyltransferase |Schizosaccharomyces pombe|chr ... 27 2.6
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 27 2.6
SPBC1289.10c |||transcription factor |Schizosaccharomyces pombe|... 27 3.5
SPACUNK12.02c |cmk1||calcium/calmodulin-dependent protein kinase... 27 3.5
SPAC2F7.03c |pom1||DYRK family protein kinase Pom1|Schizosacchar... 27 3.5
SPAC977.17 |||MIP water channel|Schizosaccharomyces pombe|chr 1|... 26 6.1
SPBC19G7.16 |iws1||transcription elongation factor complex subun... 26 6.1
SPAC13G7.13c |msa1|SPAC6C3.01c|RNA-binding protein Msa1|Schizosa... 26 6.1
SPBC3F6.05 |rga1||GTPase activating protein Rga1|Schizosaccharom... 26 6.1
SPAC6G10.07 |||nuclear cap-binding complex large subunit |Schizo... 25 8.0
SPBC32F12.07c |||ubiquitin-protein ligase E3 |Schizosaccharomyce... 25 8.0
SPCC61.03 |||conserved protein|Schizosaccharomyces pombe|chr 3||... 25 8.0
>SPBC409.18 |||phosphatidic acid phosphatase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 279
Score = 60.1 bits (139), Expect = 3e-10
Identities = 52/174 (29%), Positives = 78/174 (44%), Gaps = 4/174 (2%)
Frame = -2
Query: 643 GKFLSGSLIPGWLWETYSTVGIFTFGAACQQLTANLAKYVIGRLRPHFFDVCRPIPDAGS 464
GK + SL+ W+ S +G+ C L +L K +GR RP F C+P
Sbjct: 80 GKLRNNSLL---FWK--SLMGLLYSTMVCG-LCVSLLKNAVGRPRPDFLARCQPF----E 129
Query: 463 SQNALGYIQEYRCS-GGDEALLKDMRLSFPSAHASFSMYCAIFFIFYVQVKGKWRGSKLL 287
S G + CS + +L+D SFPS H SFS F ++ + K +K
Sbjct: 130 STPKTGLVDVLSCSVPWSDKVLQDGFRSFPSGHTSFSFAGLGFLAIFLAGQLKMFRNKTS 189
Query: 286 RHGVQYAVV---IAAWYVGLSRVVEHMHHWSDVAAGFAIGATYAMLIFIFVLKP 134
V +V IA+W +GLSR ++ HH D+A G G A +++ + P
Sbjct: 190 SWKVVVPLVPLSIASW-IGLSRSQDYRHHKEDIAVGALFGFAIAYVVYRQLFPP 242
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 31.5 bits (68), Expect = 0.12
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +3
Query: 546 VSC*QAAPNVKIPTVEYVSHSQPGMSDPDRNFPPIPLP 659
VS AAP ++P V +S P + P + PPIP+P
Sbjct: 1000 VSTSPAAPLARVPPVPKLSSKAPPVPLPSADAPPIPVP 1037
>SPAC26A3.06 |||methyltransferase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 268
Score = 27.1 bits (57), Expect = 2.6
Identities = 19/52 (36%), Positives = 25/52 (48%)
Frame = +2
Query: 299 APPLAFHLDVEDKEYGTVHREARVCTRKREAHVLQESLIATATSVLLDVAEG 454
APP F+ DVE +Y T R + T E + E L A S +LD+ G
Sbjct: 8 APPEIFYNDVEAGKYSTNTRIQSIQTEMSERAL--ELLDAEGPSFILDIGCG 57
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 27.1 bits (57), Expect = 2.6
Identities = 18/42 (42%), Positives = 20/42 (47%)
Frame = -3
Query: 558 VNSSQPISRST*SGDCAHISSMSAGRSRTPDPRKTPSATSRS 433
VNSS PI+ ST I+S S S TP T TS S
Sbjct: 498 VNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTALNTSTS 539
Score = 27.1 bits (57), Expect = 2.6
Identities = 18/42 (42%), Positives = 20/42 (47%)
Frame = -3
Query: 558 VNSSQPISRST*SGDCAHISSMSAGRSRTPDPRKTPSATSRS 433
VNSS PI+ ST I+S S S TP T TS S
Sbjct: 2610 VNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTALNTSTS 2651
Score = 27.1 bits (57), Expect = 2.6
Identities = 18/42 (42%), Positives = 20/42 (47%)
Frame = -3
Query: 558 VNSSQPISRST*SGDCAHISSMSAGRSRTPDPRKTPSATSRS 433
VNSS PI+ ST I+S S S TP T TS S
Sbjct: 2934 VNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTALNTSTS 2975
Score = 26.6 bits (56), Expect = 3.5
Identities = 18/42 (42%), Positives = 20/42 (47%)
Frame = -3
Query: 558 VNSSQPISRST*SGDCAHISSMSAGRSRTPDPRKTPSATSRS 433
VNSS PI+ ST I+S S S TP T TS S
Sbjct: 1266 VNSSTPITSSTALNTSIPITSSSVLNSSTPITSSTALNTSTS 1307
Score = 26.2 bits (55), Expect = 4.6
Identities = 18/52 (34%), Positives = 23/52 (44%)
Frame = -3
Query: 558 VNSSQPISRST*SGDCAHISSMSAGRSRTPDPRKTPSATSRSTDVAVAMRLS 403
+NSS PI+ ST I+S S S TP T TS + A+ S
Sbjct: 1086 LNSSTPITSSTVLNSSTPITSSSVLNSSTPITSSTVVNTSTPITSSTALNTS 1137
Score = 26.2 bits (55), Expect = 4.6
Identities = 17/40 (42%), Positives = 19/40 (47%)
Frame = -3
Query: 558 VNSSQPISRST*SGDCAHISSMSAGRSRTPDPRKTPSATS 439
VNSS PI+ ST I+S S S TP T TS
Sbjct: 2814 VNSSTPITSSTVLNSSTPITSSSVLNSSTPITSSTALNTS 2853
Score = 25.8 bits (54), Expect = 6.1
Identities = 17/40 (42%), Positives = 19/40 (47%)
Frame = -3
Query: 558 VNSSQPISRST*SGDCAHISSMSAGRSRTPDPRKTPSATS 439
VNSS PI+ ST I+S S S TP T TS
Sbjct: 1386 VNSSTPITSSTVLNSSTPITSSSVLNSSTPITSSTVVNTS 1425
Score = 25.8 bits (54), Expect = 6.1
Identities = 17/40 (42%), Positives = 19/40 (47%)
Frame = -3
Query: 558 VNSSQPISRST*SGDCAHISSMSAGRSRTPDPRKTPSATS 439
VNSS PI+ ST I+S S S TP T TS
Sbjct: 1578 VNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTALNTS 1617
Score = 25.8 bits (54), Expect = 6.1
Identities = 17/40 (42%), Positives = 19/40 (47%)
Frame = -3
Query: 558 VNSSQPISRST*SGDCAHISSMSAGRSRTPDPRKTPSATS 439
VNSS PI+ ST I+S S S TP T TS
Sbjct: 1746 VNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTALNTS 1785
Score = 25.8 bits (54), Expect = 6.1
Identities = 17/40 (42%), Positives = 19/40 (47%)
Frame = -3
Query: 558 VNSSQPISRST*SGDCAHISSMSAGRSRTPDPRKTPSATS 439
VNSS PI+ ST I+S S S TP T TS
Sbjct: 1842 VNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTALNTS 1881
Score = 25.8 bits (54), Expect = 6.1
Identities = 17/40 (42%), Positives = 19/40 (47%)
Frame = -3
Query: 558 VNSSQPISRST*SGDCAHISSMSAGRSRTPDPRKTPSATS 439
VNSS PI+ ST I+S S S TP T TS
Sbjct: 2034 VNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTALNTS 2073
Score = 25.8 bits (54), Expect = 6.1
Identities = 17/40 (42%), Positives = 19/40 (47%)
Frame = -3
Query: 558 VNSSQPISRST*SGDCAHISSMSAGRSRTPDPRKTPSATS 439
VNSS PI+ ST I+S S S TP T TS
Sbjct: 2226 VNSSTPITSSTVLNSSTPITSSSVLNSSTPITSSTVVNTS 2265
Score = 25.8 bits (54), Expect = 6.1
Identities = 18/52 (34%), Positives = 23/52 (44%)
Frame = -3
Query: 558 VNSSQPISRST*SGDCAHISSMSAGRSRTPDPRKTPSATSRSTDVAVAMRLS 403
+NSS PI+ ST I+S S S TP T TS + A+ S
Sbjct: 2322 LNSSTPITSSTVVNTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTALNTS 2373
Score = 25.8 bits (54), Expect = 6.1
Identities = 17/40 (42%), Positives = 19/40 (47%)
Frame = -3
Query: 558 VNSSQPISRST*SGDCAHISSMSAGRSRTPDPRKTPSATS 439
VNSS PI+ ST I+S S S TP T TS
Sbjct: 2514 VNSSTPITSSTVLNSSTPITSSSVLNSSTPITSSTVVNTS 2553
Score = 25.8 bits (54), Expect = 6.1
Identities = 18/52 (34%), Positives = 23/52 (44%)
Frame = -3
Query: 558 VNSSQPISRST*SGDCAHISSMSAGRSRTPDPRKTPSATSRSTDVAVAMRLS 403
+NSS PI+ ST I+S S S TP T TS + A+ S
Sbjct: 2730 LNSSTPITSSTVVNTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTALNTS 2781
Score = 25.8 bits (54), Expect = 6.1
Identities = 17/42 (40%), Positives = 20/42 (47%)
Frame = -3
Query: 558 VNSSQPISRST*SGDCAHISSMSAGRSRTPDPRKTPSATSRS 433
+NSS PI+ ST I+S S S TP T TS S
Sbjct: 2838 LNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTALNTSTS 2879
Score = 25.4 bits (53), Expect = 8.0
Identities = 17/40 (42%), Positives = 19/40 (47%)
Frame = -3
Query: 558 VNSSQPISRST*SGDCAHISSMSAGRSRTPDPRKTPSATS 439
VNSS PI+ ST I+S S S TP T TS
Sbjct: 906 VNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTGLNTS 945
Score = 25.4 bits (53), Expect = 8.0
Identities = 17/40 (42%), Positives = 19/40 (47%)
Frame = -3
Query: 558 VNSSQPISRST*SGDCAHISSMSAGRSRTPDPRKTPSATS 439
VNSS PI+ ST I+S S S TP T TS
Sbjct: 1434 VNSSTPITSSTVVNTSTPITSSSVLNSSTPITSSTVVNTS 1473
Score = 25.4 bits (53), Expect = 8.0
Identities = 17/40 (42%), Positives = 19/40 (47%)
Frame = -3
Query: 558 VNSSQPISRST*SGDCAHISSMSAGRSRTPDPRKTPSATS 439
VNSS PI+ ST I+S S S TP T TS
Sbjct: 1686 VNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTVVNTS 1725
Score = 25.4 bits (53), Expect = 8.0
Identities = 17/40 (42%), Positives = 19/40 (47%)
Frame = -3
Query: 558 VNSSQPISRST*SGDCAHISSMSAGRSRTPDPRKTPSATS 439
VNSS PI+ ST I+S S S TP T TS
Sbjct: 2298 VNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTVVNTS 2337
Score = 25.4 bits (53), Expect = 8.0
Identities = 17/42 (40%), Positives = 20/42 (47%)
Frame = -3
Query: 558 VNSSQPISRST*SGDCAHISSMSAGRSRTPDPRKTPSATSRS 433
+NSS PI+ ST I+S S S TP T TS S
Sbjct: 2382 LNSSTPITSSTVVNTSTPITSSSVLNSSTPITSSTVVNTSTS 2423
Score = 25.4 bits (53), Expect = 8.0
Identities = 17/40 (42%), Positives = 19/40 (47%)
Frame = -3
Query: 558 VNSSQPISRST*SGDCAHISSMSAGRSRTPDPRKTPSATS 439
VNSS PI+ ST I+S S S TP T TS
Sbjct: 2706 VNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTVVNTS 2745
Score = 25.4 bits (53), Expect = 8.0
Identities = 18/52 (34%), Positives = 23/52 (44%)
Frame = -3
Query: 558 VNSSQPISRST*SGDCAHISSMSAGRSRTPDPRKTPSATSRSTDVAVAMRLS 403
VNSS PI+ ST I+S S S TP T +S + A+ S
Sbjct: 3378 VNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTVVNSSTPITSSTALNTS 3429
>SPBC1289.10c |||transcription factor |Schizosaccharomyces pombe|chr
2|||Manual
Length = 743
Score = 26.6 bits (56), Expect = 3.5
Identities = 18/54 (33%), Positives = 27/54 (50%)
Frame = -3
Query: 582 ESSRLGPPVNSSQPISRST*SGDCAHISSMSAGRSRTPDPRKTPSATSRSTDVA 421
E++ +GP + SQ + D + +G+S PD TPSA + ST VA
Sbjct: 637 EATSVGPALEPSQ--GANVHKSDSELDNQNQSGKSN-PDTSATPSAPTESTTVA 687
>SPACUNK12.02c |cmk1||calcium/calmodulin-dependent protein kinase
Cmk1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 335
Score = 26.6 bits (56), Expect = 3.5
Identities = 12/28 (42%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Frame = -1
Query: 518 ETAPTFLR-CLQADPGRRILAKRPRLHP 438
ETA F++ CL+ DP +R+ A HP
Sbjct: 262 ETAKDFIKKCLENDPSKRLTAADALKHP 289
>SPAC2F7.03c |pom1||DYRK family protein kinase
Pom1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1087
Score = 26.6 bits (56), Expect = 3.5
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = -3
Query: 480 SRTPDPRKTPSATSRSTDV 424
SR PDP+ P A S+ T+V
Sbjct: 379 SRNPDPKAAPKAVSQKTNV 397
>SPAC977.17 |||MIP water channel|Schizosaccharomyces pombe|chr
1|||Manual
Length = 598
Score = 25.8 bits (54), Expect = 6.1
Identities = 14/51 (27%), Positives = 21/51 (41%), Gaps = 8/51 (15%)
Frame = -2
Query: 253 AWYVGLSRVVEHMHHW--------SDVAAGFAIGATYAMLIFIFVLKPKKY 125
AW++G H++HW + G A G Y ++IF P Y
Sbjct: 512 AWWIGYGPHSFHLYHWWWTWGAWGGTIGGGIAGGLIYDLVIFTGPESPLNY 562
>SPBC19G7.16 |iws1||transcription elongation factor complex subunit
Iws1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 428
Score = 25.8 bits (54), Expect = 6.1
Identities = 18/55 (32%), Positives = 28/55 (50%)
Frame = -1
Query: 212 PLERRGGWFRHRRHIRYAYFHLRSEAEEVRRTRDVAAAGTQEYASQAGTGAMTDP 48
P+ +R +R R + A F+ E + RR RD+AAA + + A + TG P
Sbjct: 316 PIIKRSANYRDRA-VGVASFN--PEVFQTRRRRDLAAAESNDDAQASRTGRTVIP 367
>SPAC13G7.13c |msa1|SPAC6C3.01c|RNA-binding protein
Msa1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 533
Score = 25.8 bits (54), Expect = 6.1
Identities = 12/45 (26%), Positives = 24/45 (53%)
Frame = -1
Query: 152 HLRSEAEEVRRTRDVAAAGTQEYASQAGTGAMTDPFHCTKSLKEI 18
H+R E +V RT +++A Q Y ++ + +P+ + + EI
Sbjct: 150 HIRIERAKVNRTIRISSAPHQPYITKKDIDNLLEPYGEVEDVTEI 194
>SPBC3F6.05 |rga1||GTPase activating protein
Rga1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1150
Score = 25.8 bits (54), Expect = 6.1
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = -2
Query: 457 NALGYIQEYRCSGGDEALLKDMRLSFPSAHASFSMYCAIFFIFYVQV 317
+AL Y +EY S + DM L + + S+ CA FI Y+++
Sbjct: 315 HALSYFEEYTAS-----CISDMLLLVSNGEFTKSVICAQKFIRYIEI 356
>SPAC6G10.07 |||nuclear cap-binding complex large subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 780
Score = 25.4 bits (53), Expect = 8.0
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = -1
Query: 551 AHSQSREVRDRETAPTFLRCLQ 486
A S SRE D ET T L C+Q
Sbjct: 61 AMSLSREANDPETISTILDCIQ 82
>SPBC32F12.07c |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 340
Score = 25.4 bits (53), Expect = 8.0
Identities = 9/20 (45%), Positives = 10/20 (50%)
Frame = +3
Query: 48 GVGHRASTGLGSVFLGTGCC 107
G+GH GL V G G C
Sbjct: 84 GIGHSLEAGLAQVTFGVGSC 103
>SPCC61.03 |||conserved protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 327
Score = 25.4 bits (53), Expect = 8.0
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +3
Query: 57 HRASTGLGSVFLGTGCCHVSGAPYF 131
H+ G VF GC H +GAPY+
Sbjct: 27 HKGQAGRVGVF--GGCQHYTGAPYY 49
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,321,624
Number of Sequences: 5004
Number of extensions: 75730
Number of successful extensions: 388
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 231
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 384
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 329179816
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -