Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P15_pT_N18
(707 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF098992-15|AAN39673.1| 340|Caenorhabditis elegans Hypothetical... 112 3e-25
AF098992-14|AAD34669.1| 346|Caenorhabditis elegans Hypothetical... 112 3e-25
AF098992-13|AAN39672.1| 385|Caenorhabditis elegans Hypothetical... 112 3e-25
U28738-7|AAA68312.1| 341|Caenorhabditis elegans Hypothetical pr... 95 6e-20
U28738-5|AAT92055.1| 342|Caenorhabditis elegans Hypothetical pr... 95 6e-20
U28738-6|AAT92056.1| 274|Caenorhabditis elegans Hypothetical pr... 91 5e-19
Z68105-4|CAA92120.2| 304|Caenorhabditis elegans Hypothetical pr... 56 3e-08
Z49130-2|CAA88966.1| 396|Caenorhabditis elegans Hypothetical pr... 53 2e-07
Z81035-5|CAB02738.1| 246|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z81495-5|CAB04059.1| 178|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z81104-9|CAB70252.3| 488|Caenorhabditis elegans Hypothetical pr... 28 7.5
U39648-9|AAM15605.1| 186|Caenorhabditis elegans Hypothetical pr... 28 7.5
U40798-6|AAA81476.1| 1003|Caenorhabditis elegans Temporarily ass... 27 9.9
AL110485-2|CAE45741.1| 1021|Caenorhabditis elegans Hypothetical ... 27 9.9
AL110485-1|CAB60374.3| 1085|Caenorhabditis elegans Hypothetical ... 27 9.9
>AF098992-15|AAN39673.1| 340|Caenorhabditis elegans Hypothetical
protein F53C3.13c protein.
Length = 340
Score = 112 bits (269), Expect = 3e-25
Identities = 61/153 (39%), Positives = 88/153 (57%), Gaps = 2/153 (1%)
Frame = -2
Query: 595 YSTVGIFTFGAACQQLTANLAKYVIGRLRPHFFDVCRP-IPDAGSSQNALGYIQEYRCSG 419
Y +G F G QL ++AKY IGR RPHF DVCRP I SQ L YI +++C+
Sbjct: 110 YCFIGYFFVGVCFNQLMVDIAKYTIGRQRPHFMDVCRPDIGYQTCSQPDL-YITDFKCTT 168
Query: 418 GDEALLKDMRLSFPSAHASFSMYCAIFFIFYVQVK-GKWRGSKLLRHGVQYAVVIAAWYV 242
D + + +LSF S H++FS Y A F Y+Q + + S+LL +Q+ + A YV
Sbjct: 169 TDTKKIHEAQLSFYSGHSAFSFYAAWFTSLYLQARLFRPLFSRLLLPVIQFLLFGGAAYV 228
Query: 241 GLSRVVEHMHHWSDVAAGFAIGATYAMLIFIFV 143
L+RV ++ HHWSDV G +G+ + + +FV
Sbjct: 229 SLTRVSDYKHHWSDVLVGAIMGSAIGVFVALFV 261
>AF098992-14|AAD34669.1| 346|Caenorhabditis elegans Hypothetical
protein F53C3.13a protein.
Length = 346
Score = 112 bits (269), Expect = 3e-25
Identities = 61/153 (39%), Positives = 88/153 (57%), Gaps = 2/153 (1%)
Frame = -2
Query: 595 YSTVGIFTFGAACQQLTANLAKYVIGRLRPHFFDVCRP-IPDAGSSQNALGYIQEYRCSG 419
Y +G F G QL ++AKY IGR RPHF DVCRP I SQ L YI +++C+
Sbjct: 110 YCFIGYFFVGVCFNQLMVDIAKYTIGRQRPHFMDVCRPDIGYQTCSQPDL-YITDFKCTT 168
Query: 418 GDEALLKDMRLSFPSAHASFSMYCAIFFIFYVQVK-GKWRGSKLLRHGVQYAVVIAAWYV 242
D + + +LSF S H++FS Y A F Y+Q + + S+LL +Q+ + A YV
Sbjct: 169 TDTKKIHEAQLSFYSGHSAFSFYAAWFTSLYLQARLFRPLFSRLLLPVIQFLLFGGAAYV 228
Query: 241 GLSRVVEHMHHWSDVAAGFAIGATYAMLIFIFV 143
L+RV ++ HHWSDV G +G+ + + +FV
Sbjct: 229 SLTRVSDYKHHWSDVLVGAIMGSAIGVFVALFV 261
>AF098992-13|AAN39672.1| 385|Caenorhabditis elegans Hypothetical
protein F53C3.13b protein.
Length = 385
Score = 112 bits (269), Expect = 3e-25
Identities = 61/153 (39%), Positives = 88/153 (57%), Gaps = 2/153 (1%)
Frame = -2
Query: 595 YSTVGIFTFGAACQQLTANLAKYVIGRLRPHFFDVCRP-IPDAGSSQNALGYIQEYRCSG 419
Y +G F G QL ++AKY IGR RPHF DVCRP I SQ L YI +++C+
Sbjct: 110 YCFIGYFFVGVCFNQLMVDIAKYTIGRQRPHFMDVCRPDIGYQTCSQPDL-YITDFKCTT 168
Query: 418 GDEALLKDMRLSFPSAHASFSMYCAIFFIFYVQVK-GKWRGSKLLRHGVQYAVVIAAWYV 242
D + + +LSF S H++FS Y A F Y+Q + + S+LL +Q+ + A YV
Sbjct: 169 TDTKKIHEAQLSFYSGHSAFSFYAAWFTSLYLQARLFRPLFSRLLLPVIQFLLFGGAAYV 228
Query: 241 GLSRVVEHMHHWSDVAAGFAIGATYAMLIFIFV 143
L+RV ++ HHWSDV G +G+ + + +FV
Sbjct: 229 SLTRVSDYKHHWSDVLVGAIMGSAIGVFVALFV 261
>U28738-7|AAA68312.1| 341|Caenorhabditis elegans Hypothetical
protein T28D9.3a protein.
Length = 341
Score = 94.7 bits (225), Expect = 6e-20
Identities = 59/176 (33%), Positives = 91/176 (51%), Gaps = 1/176 (0%)
Frame = -2
Query: 595 YSTVGIFTFGAACQQLTANLAKYVIGRLRPHFFDVCRPIPDAGSSQNALGYIQEYRCSGG 416
YS +G F A +T K+V+GRLRPHF DVC+ D + ++ YI +Y C+G
Sbjct: 128 YSQIG-FVMNIALNIVT----KHVVGRLRPHFLDVCKLANDTCVTGDSHRYITDYTCTGP 182
Query: 415 DEALLKDMRLSFPSAHASFSMYCAIFFIFYVQVK-GKWRGSKLLRHGVQYAVVIAAWYVG 239
E +L + R SF S H++ S+YCA + Y+Q + G ++++ Q + + +
Sbjct: 183 PELVL-EARKSFYSGHSAVSLYCATWSALYIQARLGPVLNNRIVVPISQTLMFMIGLGIS 241
Query: 238 LSRVVEHMHHWSDVAAGFAIGATYAMLIFIFVLKPKKYGAPETWQQPVPRNTLPRP 71
SR+ ++ HHWSDV G IG A+ F + E+ QP+ LPRP
Sbjct: 242 FSRITDNKHHWSDVLVGIFIGIFLAVYTCTFWTDLFSNNSTESETQPL---LLPRP 294
>U28738-5|AAT92055.1| 342|Caenorhabditis elegans Hypothetical
protein T28D9.3b protein.
Length = 342
Score = 94.7 bits (225), Expect = 6e-20
Identities = 59/176 (33%), Positives = 91/176 (51%), Gaps = 1/176 (0%)
Frame = -2
Query: 595 YSTVGIFTFGAACQQLTANLAKYVIGRLRPHFFDVCRPIPDAGSSQNALGYIQEYRCSGG 416
YS +G F A +T K+V+GRLRPHF DVC+ D + ++ YI +Y C+G
Sbjct: 129 YSQIG-FVMNIALNIVT----KHVVGRLRPHFLDVCKLANDTCVTGDSHRYITDYTCTGP 183
Query: 415 DEALLKDMRLSFPSAHASFSMYCAIFFIFYVQVK-GKWRGSKLLRHGVQYAVVIAAWYVG 239
E +L + R SF S H++ S+YCA + Y+Q + G ++++ Q + + +
Sbjct: 184 PELVL-EARKSFYSGHSAVSLYCATWSALYIQARLGPVLNNRIVVPISQTLMFMIGLGIS 242
Query: 238 LSRVVEHMHHWSDVAAGFAIGATYAMLIFIFVLKPKKYGAPETWQQPVPRNTLPRP 71
SR+ ++ HHWSDV G IG A+ F + E+ QP+ LPRP
Sbjct: 243 FSRITDNKHHWSDVLVGIFIGIFLAVYTCTFWTDLFSNNSTESETQPL---LLPRP 295
>U28738-6|AAT92056.1| 274|Caenorhabditis elegans Hypothetical
protein T28D9.3c protein.
Length = 274
Score = 91.5 bits (217), Expect = 5e-19
Identities = 52/152 (34%), Positives = 82/152 (53%), Gaps = 1/152 (0%)
Frame = -2
Query: 595 YSTVGIFTFGAACQQLTANLAKYVIGRLRPHFFDVCRPIPDAGSSQNALGYIQEYRCSGG 416
YS +G F A +T K+V+GRLRPHF DVC+ D + ++ YI +Y C+G
Sbjct: 129 YSQIG-FVMNIALNIVT----KHVVGRLRPHFLDVCKLANDTCVTGDSHRYITDYTCTGP 183
Query: 415 DEALLKDMRLSFPSAHASFSMYCAIFFIFYVQVK-GKWRGSKLLRHGVQYAVVIAAWYVG 239
E +L + R SF S H++ S+YCA + Y+Q + G ++++ Q + + +
Sbjct: 184 PELVL-EARKSFYSGHSAVSLYCATWSALYIQARLGPVLNNRIVVPISQTLMFMIGLGIS 242
Query: 238 LSRVVEHMHHWSDVAAGFAIGATYAMLIFIFV 143
SR+ ++ HHWSDV G IG A+ I +
Sbjct: 243 FSRITDNKHHWSDVLVGIFIGIFLAVYTVILL 274
>Z68105-4|CAA92120.2| 304|Caenorhabditis elegans Hypothetical
protein F13E6.5 protein.
Length = 304
Score = 55.6 bits (128), Expect = 3e-08
Identities = 35/143 (24%), Positives = 65/143 (45%), Gaps = 5/143 (3%)
Frame = -2
Query: 565 AACQQLTANLAKYVIGRLRPHFFDVCRPIPDAGSSQNALGYI--QEYRCSGGDEALLKDM 392
AAC K +GRLRPHFF VC+P + +I + C+ + ++
Sbjct: 137 AACT-FAMEFLKCYVGRLRPHFFSVCKPDWSKVDCTDKQSFIDSSDLVCTNPNPRKIRTA 195
Query: 391 RLSFPSAHASFSMYCAIFFIFYVQVKGKWRGSK---LLRHGVQYAVVIAAWYVGLSRVVE 221
R SFPS H + + + +F Y++ + G K +R+ + + + + ++RV +
Sbjct: 196 RTSFPSGHTAAAFHVFLFVYIYLRRMAENTGIKEIITIRNILVPSYALWTVFCAVTRVTD 255
Query: 220 HMHHWSDVAAGFAIGATYAMLIF 152
+ H +DV G + + + F
Sbjct: 256 NWHFPTDVLGGVILAVVFIIPAF 278
>Z49130-2|CAA88966.1| 396|Caenorhabditis elegans Hypothetical
protein T06D8.3 protein.
Length = 396
Score = 52.8 bits (121), Expect = 2e-07
Identities = 41/151 (27%), Positives = 66/151 (43%), Gaps = 4/151 (2%)
Frame = -2
Query: 580 IFTFGAACQQLTANLAKYVIGRLRPHFFDVCRPIPDAGSS--QNALGYIQEYRCS--GGD 413
I+ G Q+ + K + G RP+F +C A ++ +++ C+ G D
Sbjct: 149 IYLAGLLIVQIFVDTIKLMTGYQRPYFLSLCNVSITACTAPLEHSPSPSPHLACNYRGAD 208
Query: 412 EALLKDMRLSFPSAHASFSMYCAIFFIFYVQVKGKWRGSKLLRHGVQYAVVIAAWYVGLS 233
E L+ L+FPS HA S Y A F Y+ RG+ LLR + + + S
Sbjct: 209 E--LRYAWLTFPSLHAVVSSYAACFASLYIYYMINLRGAPLLRPLLIFGFMGLCIVDSFS 266
Query: 232 RVVEHMHHWSDVAAGFAIGATYAMLIFIFVL 140
R+ + +HW D+ + IG A + VL
Sbjct: 267 RINGYKNHWRDIWVAWVIGIFMAWFLCYCVL 297
>Z81035-5|CAB02738.1| 246|Caenorhabditis elegans Hypothetical
protein C15H11.7 protein.
Length = 246
Score = 30.7 bits (66), Expect = 1.1
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = +2
Query: 488 ADIEEMWAQSPDHVLREIGCELLTGGPKREDSHG-RVRLPQPAGYERPRQKLSADTLTLP 664
AD+ + + Q+ + +R +GC LL +D G V PAGY R + +S LP
Sbjct: 119 ADLNQYYTQNAE--MRSLGCALLF--ISYDDEKGPEVYRVDPAGYYRGMKGVSVGVKQLP 174
Query: 665 VTHYL 679
T +L
Sbjct: 175 ATSFL 179
>Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical
protein W02B12.2 protein.
Length = 281
Score = 30.7 bits (66), Expect = 1.1
Identities = 19/53 (35%), Positives = 25/53 (47%)
Frame = +1
Query: 379 ETRGACPSREPHRHRYIGTPGCSRGRFARIRRPGSACRHRRNVGAVSRSRTSR 537
ETR SR P R +P SR AR R PGS R++ A + R+ +
Sbjct: 184 ETRDRSRSRSPRRRSRSRSPTRSRSPPARRRSPGSDRSDRKSRSASPKKRSDK 236
>Z81495-5|CAB04059.1| 178|Caenorhabditis elegans Hypothetical
protein F08G2.5 protein.
Length = 178
Score = 29.1 bits (62), Expect = 3.3
Identities = 15/43 (34%), Positives = 18/43 (41%)
Frame = -1
Query: 284 SRSPVCRCDSGLVRGPLQGGGTYAPLERRGGWFRHRRHIRYAY 156
S S CRC GL + G + P R G W +R R Y
Sbjct: 122 SDSSPCRCRDGLAEWEQRHGRRWHPYGRNGTWEPYRNRRRGIY 164
>Z81104-9|CAB70252.3| 488|Caenorhabditis elegans Hypothetical
protein M199.2 protein.
Length = 488
Score = 27.9 bits (59), Expect = 7.5
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +2
Query: 590 RVRLPQPAGYERPRQKLSADTLTLPV 667
R LP+PA Y+ PR++ + + L PV
Sbjct: 8 RASLPRPAPYQLPREQKTENLLNAPV 33
>U39648-9|AAM15605.1| 186|Caenorhabditis elegans Hypothetical
protein T13C5.6 protein.
Length = 186
Score = 27.9 bits (59), Expect = 7.5
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = -2
Query: 244 VGLSRVVEHMHHWSDVAAGFAIGATYAMLI 155
VGLSRV H+ +DV AG IG A L+
Sbjct: 141 VGLSRVALGRHYITDVLAGIFIGYLEARLM 170
>U40798-6|AAA81476.1| 1003|Caenorhabditis elegans Temporarily
assigned gene nameprotein 158 protein.
Length = 1003
Score = 27.5 bits (58), Expect = 9.9
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Frame = -2
Query: 706 FIIFTVLIXEIVRDRQGKGIGGKFLSGSLIPGWLWETYSTVGIF--TFGAACQQL 548
FI + ++RD+ G+ +GG+ + L W +G F TFGAA Q L
Sbjct: 380 FIFGGAIDNAVLRDKNGQSVGGQMVVALL--SWPSPWVLLIGSFLSTFGAALQCL 432
>AL110485-2|CAE45741.1| 1021|Caenorhabditis elegans Hypothetical
protein Y46G5A.1b protein.
Length = 1021
Score = 27.5 bits (58), Expect = 9.9
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -3
Query: 519 GDCAHISSMSAGRSRTPDPRKTPSATSRST 430
G+ +S S G R P PR +PS TS +T
Sbjct: 351 GNMTPTASSSGGYPRVPVPRHSPSFTSSAT 380
>AL110485-1|CAB60374.3| 1085|Caenorhabditis elegans Hypothetical
protein Y46G5A.1a protein.
Length = 1085
Score = 27.5 bits (58), Expect = 9.9
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -3
Query: 519 GDCAHISSMSAGRSRTPDPRKTPSATSRST 430
G+ +S S G R P PR +PS TS +T
Sbjct: 351 GNMTPTASSSGGYPRVPVPRHSPSFTSSAT 380
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,016,287
Number of Sequences: 27780
Number of extensions: 465185
Number of successful extensions: 1538
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1421
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1523
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1645110168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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