Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_pT_N17
         (667 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z34801-6|CAA84329.1|  428|Caenorhabditis elegans Hypothetical pr...   202   2e-52
Z34801-7|CAJ76938.1|   85|Caenorhabditis elegans Hypothetical pr...    61   6e-10
Z83114-1|CAB63234.1|  549|Caenorhabditis elegans Hypothetical pr...    29   3.9  
AC006674-4|AAF39940.1|  402|Caenorhabditis elegans Hypothetical ...    28   5.2  
U41264-7|AAA82427.2|  819|Caenorhabditis elegans Hypothetical pr...    27   9.1  
AC025723-3|AAK29935.1|  254|Caenorhabditis elegans Hypothetical ...    27   9.1  

>Z34801-6|CAA84329.1|  428|Caenorhabditis elegans Hypothetical
           protein F59A2.4a protein.
          Length = 428

 Score =  202 bits (493), Expect = 2e-52
 Identities = 90/201 (44%), Positives = 141/201 (70%), Gaps = 1/201 (0%)
 Frame = -2

Query: 663 GVIINTCGWIKNAGYKVLTHAAQAFEVDVILVLDNERLYNELKRDMPKFVKVVYLPKSGG 484
           G+IINTCGW+   GYK +  AA AFEVDV++VLD+ERLY++L +++P+FV++ ++PKSGG
Sbjct: 225 GMIINTCGWVDGEGYKCIVKAASAFEVDVVIVLDHERLYSDLSKELPEFVRLTHVPKSGG 284

Query: 483 VVERSGTQRAEARDARIREYXYGKR-TPYYPHSFDVKFSDLKIYKVGAPSLPDSCMPLGM 307
           V +R+G  R++ R   +  Y YG R    YP +FDV F D+ + K+GA  LPDSC+P GM
Sbjct: 285 VEQRTGQIRSKMRGENVHRYFYGTRANNLYPFTFDVSFDDVTLCKIGAEQLPDSCLPFGM 344

Query: 306 RAEDALTRLVAVWGGRALQHRLLAVSFAAEPDDHVLHSNLAGFVCVTAVDMERQTLTVLS 127
             E+  T+LV +     ++H L A S + + D++VL S + GF  VT VD+E++T+++L 
Sbjct: 345 EVENHETKLVIMEPSADIKHHLFAFSRSTKADENVLKSPVFGFCLVTEVDLEKRTMSILC 404

Query: 126 PQPRPLPNTILLLSELQYMDN 64
           PQ R +P+ +L+ S++ ++D+
Sbjct: 405 PQ-RTIPSKVLVFSDITHLDD 424


>Z34801-7|CAJ76938.1|   85|Caenorhabditis elegans Hypothetical
           protein F59A2.4b protein.
          Length = 85

 Score = 61.3 bits (142), Expect = 6e-10
 Identities = 29/82 (35%), Positives = 54/82 (65%)
 Frame = -2

Query: 309 MRAEDALTRLVAVWGGRALQHRLLAVSFAAEPDDHVLHSNLAGFVCVTAVDMERQTLTVL 130
           M  E+  T+LV +     ++H L A S + + D++VL S + GF  VT VD+E++T+++L
Sbjct: 1   MEVENHETKLVIMEPSADIKHHLFAFSRSTKADENVLKSPVFGFCLVTEVDLEKRTMSIL 60

Query: 129 SPQPRPLPNTILLLSELQYMDN 64
            PQ R +P+ +L+ S++ ++D+
Sbjct: 61  CPQ-RTIPSKVLVFSDITHLDD 81


>Z83114-1|CAB63234.1|  549|Caenorhabditis elegans Hypothetical
           protein K09B11.2 protein.
          Length = 549

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 30/126 (23%), Positives = 55/126 (43%), Gaps = 4/126 (3%)
 Frame = -2

Query: 657 IINTCGWIKNAGYKVLTHAAQAFEVDVILVL---DNERLYNELKRDMPKFVKVVYLPKSG 487
           IIN+ GW+ + G ++L    +  + ++ + +     E  Y  L R     V+ ++   S 
Sbjct: 293 IINSMGWVTDEGAEILDGITRVTDPELFVEIFRDQTEARYQFLNRAEHNIVE-IFANNSI 351

Query: 486 GVVERSGTQRAEARDARIREY-XYGKRTPYYPHSFDVKFSDLKIYKVGAPSLPDSCMPLG 310
           GV+     +R  A  A IRE    G  +   P      F  +  YK+   ++   C+P+ 
Sbjct: 352 GVIGLPPQKRLPA--ALIRELTIVGYFSSRLPRPSLASFPKVAPYKLRFENV-TICVPVD 408

Query: 309 MRAEDA 292
           +  ED+
Sbjct: 409 LLVEDS 414


>AC006674-4|AAF39940.1|  402|Caenorhabditis elegans Hypothetical
           protein K12H6.11 protein.
          Length = 402

 Score = 28.3 bits (60), Expect = 5.2
 Identities = 15/41 (36%), Positives = 24/41 (58%)
 Frame = +2

Query: 494 LGR*TTFTNLGMSRFSSLYNLSLSKTNMTSTSKACAA*VKT 616
           LGR TTFT+  +S  S +++  +S   + S+S + A   KT
Sbjct: 10  LGRLTTFTDSNISPTSLIFSSKMSSRTLRSSSSSNAISTKT 50


>U41264-7|AAA82427.2|  819|Caenorhabditis elegans Hypothetical
           protein F10E7.4 protein.
          Length = 819

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 15/29 (51%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
 Frame = +2

Query: 314 SGMHESGSDGAPTL--YILRSENLTSKEC 394
           S  + S SD  PTL   ILR +N+TS EC
Sbjct: 377 SPFYNSKSDTIPTLAKVILRRKNVTSSEC 405


>AC025723-3|AAK29935.1|  254|Caenorhabditis elegans Hypothetical
           protein Y54F10AM.6 protein.
          Length = 254

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 14/41 (34%), Positives = 19/41 (46%)
 Frame = +2

Query: 77  CSSDNNRIVLGRGRGCGDRTVKVCRSMSTAVTQTNPARLEC 199
           C   N ++  GRG+    RT KVCR       + NP   +C
Sbjct: 188 CLPQNRKLRKGRGKNIKFRTEKVCRCCCFPF-RPNPKTFKC 227


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,865,043
Number of Sequences: 27780
Number of extensions: 244931
Number of successful extensions: 836
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 782
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 835
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1497472076
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)